Protein–RNA interactions for Protein: A6NFN3

RBFOX3, RNA binding protein fox-1 homolog 3, humanhuman

Predictions only

Length 312 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3A6NFN3 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC4.74□□□□□ -1.65
RBFOX3A6NFN3 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
RBFOX3A6NFN3 ATP8B5P-203ENST00000430846 3962 ntTSL 2 BASIC4.74□□□□□ -1.65
RBFOX3A6NFN3 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
RBFOX3A6NFN3 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC4.74□□□□□ -1.65
RBFOX3A6NFN3 PYHIN1-204ENST00000392252 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
RBFOX3A6NFN3 MED31-201ENST00000225728 1654 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
RBFOX3A6NFN3 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
RBFOX3A6NFN3 GIF-201ENST00000257248 1518 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
RBFOX3A6NFN3 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
RBFOX3A6NFN3 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC4.73□□□□□ -1.65
RBFOX3A6NFN3 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
RBFOX3A6NFN3 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
RBFOX3A6NFN3 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC4.73□□□□□ -1.65
RBFOX3A6NFN3 RNA5SP355-201ENST00000365317 135 ntBASIC4.73□□□□□ -1.65
RBFOX3A6NFN3 TRGV3-201ENST00000390346 537 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
RBFOX3A6NFN3 RNA5SP176-201ENST00000390956 110 ntBASIC4.73□□□□□ -1.65
RBFOX3A6NFN3 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
RBFOX3A6NFN3 RN7SKP279-201ENST00000411383 298 ntBASIC4.73□□□□□ -1.65
RBFOX3A6NFN3 AL359962.1-201ENST00000417969 303 ntTSL 5 BASIC4.73□□□□□ -1.65
RBFOX3A6NFN3 AL121781.1-201ENST00000419863 168 ntTSL 5 BASIC4.73□□□□□ -1.65
RBFOX3A6NFN3 AC009303.1-201ENST00000426307 352 ntBASIC4.73□□□□□ -1.65
RBFOX3A6NFN3 OR52S1P-201ENST00000427016 937 ntBASIC4.73□□□□□ -1.65
RBFOX3A6NFN3 AL139220.2-214ENST00000437643 614 ntTSL 3 BASIC4.73□□□□□ -1.65
RBFOX3A6NFN3 AC092675.1-203ENST00000454230 538 ntTSL 5 BASIC4.73□□□□□ -1.65
RBFOX3A6NFN3 SRP68P2-201ENST00000456184 254 ntBASIC4.73□□□□□ -1.65
RBFOX3A6NFN3 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC4.73□□□□□ -1.65
RBFOX3A6NFN3 AC025271.1-201ENST00000485045 429 ntBASIC4.73□□□□□ -1.65
RBFOX3A6NFN3 ADAM3A-209ENST00000497806 1245 ntTSL 5 BASIC4.73□□□□□ -1.65
RBFOX3A6NFN3 AC021151.1-201ENST00000506933 183 ntTSL 3 BASIC4.73□□□□□ -1.65
RBFOX3A6NFN3 SNX24-205ENST00000506996 588 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
RBFOX3A6NFN3 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC4.73□□□□□ -1.65
RBFOX3A6NFN3 VPS37A-208ENST00000521005 479 ntTSL 3 BASIC4.73□□□□□ -1.65
RBFOX3A6NFN3 RPL27A-210ENST00000531978 867 ntTSL 2 BASIC4.73□□□□□ -1.65
RBFOX3A6NFN3 AC092865.1-201ENST00000544395 1023 ntBASIC4.73□□□□□ -1.65
RBFOX3A6NFN3 AC009729.1-201ENST00000548873 1133 ntBASIC4.73□□□□□ -1.65
RBFOX3A6NFN3 AC021979.2-201ENST00000553644 209 ntTSL 5 BASIC4.73□□□□□ -1.65
RBFOX3A6NFN3 TPRX1P1-201ENST00000557620 319 ntBASIC4.73□□□□□ -1.65
RBFOX3A6NFN3 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC4.73□□□□□ -1.65
RBFOX3A6NFN3 RNU4ATAC-201ENST00000580972 127 ntBASIC4.73□□□□□ -1.65
RBFOX3A6NFN3 AC090403.1-202ENST00000582108 833 ntTSL 3 BASIC4.73□□□□□ -1.65
RBFOX3A6NFN3 AC008507.3-201ENST00000585753 472 ntBASIC4.73□□□□□ -1.65
RBFOX3A6NFN3 FAM72A-208ENST00000607379 1139 ntBASIC4.73□□□□□ -1.65
RBFOX3A6NFN3 CCL23-203ENST00000615050 624 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
RBFOX3A6NFN3 ALKAL2-208ENST00000619265 496 ntTSL 2 BASIC4.73□□□□□ -1.65
RBFOX3A6NFN3 MIR7854-201ENST00000620068 65 ntBASIC4.73□□□□□ -1.65
RBFOX3A6NFN3 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
RBFOX3A6NFN3 ASB8-218ENST00000629941 278 ntTSL 5 BASIC4.73□□□□□ -1.65
RBFOX3A6NFN3 MIR665-201ENST00000635949 72 ntBASIC4.73□□□□□ -1.65
RBFOX3A6NFN3 MAK-205ENST00000538030 2459 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
RBFOX3A6NFN3 AC005261.6-201ENST00000623072 1387 ntBASIC4.73□□□□□ -1.65
RBFOX3A6NFN3 MAP3K19-206ENST00000392918 1460 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
RBFOX3A6NFN3 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
RBFOX3A6NFN3 SLC2A3P4-201ENST00000521259 1471 ntBASIC4.73□□□□□ -1.65
RBFOX3A6NFN3 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC4.73□□□□□ -1.65
RBFOX3A6NFN3 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
RBFOX3A6NFN3 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
RBFOX3A6NFN3 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC4.73□□□□□ -1.65
RBFOX3A6NFN3 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC4.73□□□□□ -1.65
RBFOX3A6NFN3 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
RBFOX3A6NFN3 ATG12-202ENST00000500945 1430 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
RBFOX3A6NFN3 AC130304.1-201ENST00000622942 2385 ntBASIC4.72□□□□□ -1.65
RBFOX3A6NFN3 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC4.72□□□□□ -1.65
RBFOX3A6NFN3 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC4.72□□□□□ -1.65
RBFOX3A6NFN3 AC011933.2-201ENST00000578539 2790 ntBASIC4.72□□□□□ -1.65
RBFOX3A6NFN3 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
RBFOX3A6NFN3 AL603750.1-201ENST00000624216 1717 ntBASIC4.72□□□□□ -1.65
RBFOX3A6NFN3 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
RBFOX3A6NFN3 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
RBFOX3A6NFN3 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
RBFOX3A6NFN3 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC4.72□□□□□ -1.65
RBFOX3A6NFN3 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
RBFOX3A6NFN3 OR13F1-201ENST00000334726 960 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
RBFOX3A6NFN3 RPL7-201ENST00000352983 1101 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
RBFOX3A6NFN3 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
RBFOX3A6NFN3 ENSA-207ENST00000362052 703 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
RBFOX3A6NFN3 LYZL1-201ENST00000375500 815 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
RBFOX3A6NFN3 NUDT5-202ENST00000378937 919 ntTSL 3 BASIC4.72□□□□□ -1.65
RBFOX3A6NFN3 LDHAP5-201ENST00000394996 622 ntBASIC4.72□□□□□ -1.65
RBFOX3A6NFN3 AL139135.1-201ENST00000412675 209 ntBASIC4.72□□□□□ -1.65
RBFOX3A6NFN3 MYL6P5-201ENST00000412707 459 ntBASIC4.72□□□□□ -1.65
RBFOX3A6NFN3 AL359633.1-201ENST00000421403 310 ntBASIC4.72□□□□□ -1.65
RBFOX3A6NFN3 AL358394.1-201ENST00000422807 535 ntTSL 2 BASIC4.72□□□□□ -1.65
RBFOX3A6NFN3 AC016582.1-203ENST00000433142 502 ntTSL 3 BASIC4.72□□□□□ -1.65
RBFOX3A6NFN3 LINC00271-203ENST00000438618 1202 ntTSL 3 BASIC4.72□□□□□ -1.65
RBFOX3A6NFN3 AC010240.2-201ENST00000445363 1205 ntBASIC4.72□□□□□ -1.65
RBFOX3A6NFN3 UBBP5-201ENST00000446970 266 ntBASIC4.72□□□□□ -1.65
RBFOX3A6NFN3 AC079193.1-201ENST00000460497 588 ntBASIC4.72□□□□□ -1.65
RBFOX3A6NFN3 RN7SL714P-201ENST00000487050 298 ntBASIC4.72□□□□□ -1.65
RBFOX3A6NFN3 RN7SL776P-201ENST00000493390 268 ntBASIC4.72□□□□□ -1.65
RBFOX3A6NFN3 MTERF4-220ENST00000495694 909 ntTSL 5 BASIC4.72□□□□□ -1.65
RBFOX3A6NFN3 AC091868.2-201ENST00000506717 556 ntTSL 3 BASIC4.72□□□□□ -1.65
RBFOX3A6NFN3 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC4.72□□□□□ -1.65
RBFOX3A6NFN3 EGFLAM-211ENST00000514476 676 ntTSL 2 BASIC4.72□□□□□ -1.65
RBFOX3A6NFN3 SETP21-201ENST00000514799 892 ntBASIC4.72□□□□□ -1.65
RBFOX3A6NFN3 LINC02482-202ENST00000515205 422 ntTSL 2 BASIC4.72□□□□□ -1.65
RBFOX3A6NFN3 AC010442.1-201ENST00000515583 816 ntBASIC4.72□□□□□ -1.65
RBFOX3A6NFN3 RNU4ATAC18P-201ENST00000516179 126 ntBASIC4.72□□□□□ -1.65
RBFOX3A6NFN3 IGKV2D-38-201ENST00000518423 240 ntBASIC4.72□□□□□ -1.65
RBFOX3A6NFN3 AZIN1-AS1-211ENST00000520455 480 ntTSL 3 BASIC4.72□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 68.2 ms