Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 DTNA-228ENST00000597674 1732 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
TM9SF3Q9HD45 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
TM9SF3Q9HD45 AC090616.2-201ENST00000358484 431 ntTSL 3 BASIC6.26□□□□□ -1.41
TM9SF3Q9HD45 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC6.26□□□□□ -1.41
TM9SF3Q9HD45 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC6.26□□□□□ -1.41
TM9SF3Q9HD45 AC117944.1-201ENST00000430748 641 ntTSL 3 BASIC6.26□□□□□ -1.41
TM9SF3Q9HD45 AL353662.1-201ENST00000439099 327 ntBASIC6.26□□□□□ -1.41
TM9SF3Q9HD45 AL391987.1-201ENST00000441025 200 ntBASIC6.26□□□□□ -1.41
TM9SF3Q9HD45 AL355355.1-201ENST00000442900 793 ntBASIC6.26□□□□□ -1.41
TM9SF3Q9HD45 DNAJC19P5-201ENST00000443295 316 ntBASIC6.26□□□□□ -1.41
TM9SF3Q9HD45 SEPHS1P4-201ENST00000446112 1176 ntBASIC6.26□□□□□ -1.41
TM9SF3Q9HD45 HIGD1AP16-201ENST00000450986 258 ntBASIC6.26□□□□□ -1.41
TM9SF3Q9HD45 AC092824.1-201ENST00000483524 576 ntBASIC6.26□□□□□ -1.41
TM9SF3Q9HD45 RPL34P33-201ENST00000486062 334 ntBASIC6.26□□□□□ -1.41
TM9SF3Q9HD45 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC6.26□□□□□ -1.41
TM9SF3Q9HD45 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC6.26□□□□□ -1.41
TM9SF3Q9HD45 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC6.26□□□□□ -1.41
TM9SF3Q9HD45 RN7SKP67-201ENST00000515905 235 ntBASIC6.26□□□□□ -1.41
TM9SF3Q9HD45 RN7SKP238-201ENST00000516483 249 ntBASIC6.26□□□□□ -1.41
TM9SF3Q9HD45 RNA5SP340-201ENST00000517132 107 ntBASIC6.26□□□□□ -1.41
TM9SF3Q9HD45 AC010609.1-201ENST00000519375 569 ntTSL 3 BASIC6.26□□□□□ -1.41
TM9SF3Q9HD45 AC108136.1-201ENST00000530350 631 ntTSL 5 BASIC6.26□□□□□ -1.41
TM9SF3Q9HD45 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC6.26□□□□□ -1.41
TM9SF3Q9HD45 ANP32E-205ENST00000533654 908 ntTSL 2 BASIC6.26□□□□□ -1.41
TM9SF3Q9HD45 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
TM9SF3Q9HD45 AL355075.2-201ENST00000555435 478 ntTSL 2 BASIC6.26□□□□□ -1.41
TM9SF3Q9HD45 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC6.26□□□□□ -1.41
TM9SF3Q9HD45 SOX9-AS1-216ENST00000602213 821 ntTSL 5 BASIC6.26□□□□□ -1.41
TM9SF3Q9HD45 AL117336.3-201ENST00000603160 1107 ntTSL 3 BASIC6.26□□□□□ -1.41
TM9SF3Q9HD45 AP001823.1-201ENST00000604056 1003 ntBASIC6.26□□□□□ -1.41
TM9SF3Q9HD45 AC100767.2-201ENST00000604840 693 ntBASIC6.26□□□□□ -1.41
TM9SF3Q9HD45 PPP3CB-AS1-213ENST00000620302 501 ntTSL 5 BASIC6.26□□□□□ -1.41
TM9SF3Q9HD45 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
TM9SF3Q9HD45 MLLT10-217ENST00000631589 4955 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
TM9SF3Q9HD45 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC6.26□□□□□ -1.41
TM9SF3Q9HD45 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
TM9SF3Q9HD45 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC6.26□□□□□ -1.41
TM9SF3Q9HD45 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
TM9SF3Q9HD45 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
TM9SF3Q9HD45 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
TM9SF3Q9HD45 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
TM9SF3Q9HD45 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC6.26□□□□□ -1.41
TM9SF3Q9HD45 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
TM9SF3Q9HD45 AC005332.9-201ENST00000620266 2921 ntBASIC6.26□□□□□ -1.41
TM9SF3Q9HD45 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
TM9SF3Q9HD45 LGALS17A-201ENST00000412609 2562 ntTSL 2 BASIC6.25□□□□□ -1.41
TM9SF3Q9HD45 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
TM9SF3Q9HD45 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC6.25□□□□□ -1.41
TM9SF3Q9HD45 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
TM9SF3Q9HD45 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
TM9SF3Q9HD45 HIST1H1T-201ENST00000338379 718 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
TM9SF3Q9HD45 SUGT1P2-201ENST00000379452 992 ntBASIC6.25□□□□□ -1.41
TM9SF3Q9HD45 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
TM9SF3Q9HD45 RN7SKP206-201ENST00000410823 293 ntBASIC6.25□□□□□ -1.41
TM9SF3Q9HD45 RN7SKP121-201ENST00000410842 305 ntBASIC6.25□□□□□ -1.41
TM9SF3Q9HD45 CPB2-AS1-201ENST00000415033 747 ntTSL 3 BASIC6.25□□□□□ -1.41
TM9SF3Q9HD45 LINC01114-201ENST00000421071 482 ntTSL 3 BASIC6.25□□□□□ -1.41
TM9SF3Q9HD45 CYCSP52-201ENST00000422857 310 ntBASIC6.25□□□□□ -1.41
TM9SF3Q9HD45 AC130360.1-201ENST00000425489 1117 ntBASIC6.25□□□□□ -1.41
TM9SF3Q9HD45 AC245884.2-201ENST00000426257 404 ntBASIC6.25□□□□□ -1.41
TM9SF3Q9HD45 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC6.25□□□□□ -1.41
TM9SF3Q9HD45 AC112184.1-201ENST00000505179 312 ntBASIC6.25□□□□□ -1.41
TM9SF3Q9HD45 AC108866.1-204ENST00000508362 558 ntTSL 4 BASIC6.25□□□□□ -1.41
TM9SF3Q9HD45 AC130365.2-201ENST00000525882 1201 ntBASIC6.25□□□□□ -1.41
TM9SF3Q9HD45 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC6.25□□□□□ -1.41
TM9SF3Q9HD45 PWRN1-210ENST00000568045 1299 ntTSL 2 BASIC6.25□□□□□ -1.41
TM9SF3Q9HD45 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC6.25□□□□□ -1.41
TM9SF3Q9HD45 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC6.25□□□□□ -1.41
TM9SF3Q9HD45 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC6.25□□□□□ -1.41
TM9SF3Q9HD45 AP000894.4-201ENST00000610185 483 ntBASIC6.25□□□□□ -1.41
TM9SF3Q9HD45 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC6.25□□□□□ -1.41
TM9SF3Q9HD45 RFPL4AP6-201ENST00000616792 846 ntBASIC6.25□□□□□ -1.41
TM9SF3Q9HD45 AL512652.1-201ENST00000619006 500 ntBASIC6.25□□□□□ -1.41
TM9SF3Q9HD45 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC6.25□□□□□ -1.41
TM9SF3Q9HD45 AC062022.1-201ENST00000451026 1684 ntBASIC6.25□□□□□ -1.41
TM9SF3Q9HD45 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
TM9SF3Q9HD45 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC6.25□□□□□ -1.41
TM9SF3Q9HD45 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
TM9SF3Q9HD45 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC6.25□□□□□ -1.41
TM9SF3Q9HD45 GPATCH2L-201ENST00000261530 14007 ntTSL 2 BASIC6.25□□□□□ -1.41
TM9SF3Q9HD45 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
TM9SF3Q9HD45 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
TM9SF3Q9HD45 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC6.24□□□□□ -1.41
TM9SF3Q9HD45 Z95114.1-201ENST00000624264 14574 ntBASIC6.24□□□□□ -1.41
TM9SF3Q9HD45 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC6.24□□□□□ -1.41
TM9SF3Q9HD45 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
TM9SF3Q9HD45 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
TM9SF3Q9HD45 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
TM9SF3Q9HD45 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
TM9SF3Q9HD45 LINC01751-201ENST00000569178 1770 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
TM9SF3Q9HD45 KRT39-201ENST00000355612 1696 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
TM9SF3Q9HD45 TCF12-205ENST00000537840 1598 ntTSL 2 BASIC6.24□□□□□ -1.41
TM9SF3Q9HD45 CASC19-238ENST00000641523 1558 ntBASIC6.24□□□□□ -1.41
TM9SF3Q9HD45 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC6.24□□□□□ -1.41
TM9SF3Q9HD45 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
TM9SF3Q9HD45 SSX5-201ENST00000311798 1384 ntAPPRIS P4 TSL 5 BASIC6.24□□□□□ -1.41
TM9SF3Q9HD45 IMMTP1-201ENST00000435590 2219 ntBASIC6.24□□□□□ -1.41
TM9SF3Q9HD45 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
TM9SF3Q9HD45 RN7SKP69-201ENST00000365390 305 ntBASIC6.24□□□□□ -1.41
TM9SF3Q9HD45 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC6.24□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 68.6 ms