Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 AL162739.1-201ENST00000450606 307 ntBASIC6.31□□□□□ -1.4
PCDH9Q9HC56 RN7SL352P-201ENST00000466002 277 ntBASIC6.31□□□□□ -1.4
PCDH9Q9HC56 EIF4E2P2-201ENST00000492033 736 ntBASIC6.31□□□□□ -1.4
PCDH9Q9HC56 TPM3P3-201ENST00000521343 354 ntBASIC6.31□□□□□ -1.4
PCDH9Q9HC56 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC6.31□□□□□ -1.4
PCDH9Q9HC56 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC6.31□□□□□ -1.4
PCDH9Q9HC56 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC6.31□□□□□ -1.4
PCDH9Q9HC56 AC010531.5-201ENST00000602779 450 ntTSL 3 BASIC6.31□□□□□ -1.4
PCDH9Q9HC56 RPSAP75-201ENST00000605848 301 ntBASIC6.31□□□□□ -1.4
PCDH9Q9HC56 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC6.31□□□□□ -1.4
PCDH9Q9HC56 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC6.31□□□□□ -1.4
PCDH9Q9HC56 AP005212.4-201ENST00000614206 710 ntBASIC6.31□□□□□ -1.4
PCDH9Q9HC56 TEX41-293ENST00000630451 690 ntTSL 5 BASIC6.31□□□□□ -1.4
PCDH9Q9HC56 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC6.31□□□□□ -1.4
PCDH9Q9HC56 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC6.31□□□□□ -1.4
PCDH9Q9HC56 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC6.31□□□□□ -1.4
PCDH9Q9HC56 GDA-209ENST00000545168 5362 ntTSL 2 BASIC6.31□□□□□ -1.4
PCDH9Q9HC56 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
PCDH9Q9HC56 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC6.3□□□□□ -1.4
PCDH9Q9HC56 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
PCDH9Q9HC56 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
PCDH9Q9HC56 TAF12-202ENST00000373824 1334 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
PCDH9Q9HC56 ERMARD-202ENST00000366772 2003 ntTSL 5 BASIC6.3□□□□□ -1.4
PCDH9Q9HC56 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
PCDH9Q9HC56 DDX6-207ENST00000617381 2883 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
PCDH9Q9HC56 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
PCDH9Q9HC56 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC6.3□□□□□ -1.4
PCDH9Q9HC56 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
PCDH9Q9HC56 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
PCDH9Q9HC56 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
PCDH9Q9HC56 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
PCDH9Q9HC56 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC6.3□□□□□ -1.4
PCDH9Q9HC56 MIR188-201ENST00000385034 86 ntBASIC6.3□□□□□ -1.4
PCDH9Q9HC56 AL359885.1-201ENST00000415786 903 ntBASIC6.3□□□□□ -1.4
PCDH9Q9HC56 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC6.3□□□□□ -1.4
PCDH9Q9HC56 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC6.3□□□□□ -1.4
PCDH9Q9HC56 AC021876.1-201ENST00000425959 359 ntBASIC6.3□□□□□ -1.4
PCDH9Q9HC56 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC6.3□□□□□ -1.4
PCDH9Q9HC56 AC008073.2-201ENST00000428344 792 ntTSL 5 BASIC6.3□□□□□ -1.4
PCDH9Q9HC56 RPL12P16-201ENST00000431098 498 ntBASIC6.3□□□□□ -1.4
PCDH9Q9HC56 AL137001.1-201ENST00000450212 199 ntTSL 3 BASIC6.3□□□□□ -1.4
PCDH9Q9HC56 SEC22A-207ENST00000481965 673 ntTSL 3 BASIC6.3□□□□□ -1.4
PCDH9Q9HC56 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC6.3□□□□□ -1.4
PCDH9Q9HC56 AC113367.2-201ENST00000505749 160 ntBASIC6.3□□□□□ -1.4
PCDH9Q9HC56 AC095052.1-201ENST00000509955 863 ntBASIC6.3□□□□□ -1.4
PCDH9Q9HC56 SNX18P25-201ENST00000510539 758 ntBASIC6.3□□□□□ -1.4
PCDH9Q9HC56 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC6.3□□□□□ -1.4
PCDH9Q9HC56 ZNF519P4-201ENST00000514008 125 ntBASIC6.3□□□□□ -1.4
PCDH9Q9HC56 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC6.3□□□□□ -1.4
PCDH9Q9HC56 NATP-201ENST00000523491 878 ntBASIC6.3□□□□□ -1.4
PCDH9Q9HC56 NPIPB14P-203ENST00000532298 987 ntBASIC6.3□□□□□ -1.4
PCDH9Q9HC56 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC6.3□□□□□ -1.4
PCDH9Q9HC56 AL355838.1-201ENST00000554814 559 ntTSL 4 BASIC6.3□□□□□ -1.4
PCDH9Q9HC56 HNRNPCP1-201ENST00000556181 766 ntBASIC6.3□□□□□ -1.4
PCDH9Q9HC56 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC6.3□□□□□ -1.4
PCDH9Q9HC56 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC6.3□□□□□ -1.4
PCDH9Q9HC56 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC6.3□□□□□ -1.4
PCDH9Q9HC56 AC008555.7-201ENST00000605008 583 ntBASIC6.3□□□□□ -1.4
PCDH9Q9HC56 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC6.3□□□□□ -1.4
PCDH9Q9HC56 AL135999.3-201ENST00000610501 812 ntBASIC6.3□□□□□ -1.4
PCDH9Q9HC56 MIR6889-201ENST00000613185 59 ntBASIC6.3□□□□□ -1.4
PCDH9Q9HC56 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC6.3□□□□□ -1.4
PCDH9Q9HC56 TTC33-206ENST00000636863 1149 ntTSL 5 BASIC6.3□□□□□ -1.4
PCDH9Q9HC56 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
PCDH9Q9HC56 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
PCDH9Q9HC56 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
PCDH9Q9HC56 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC6.3□□□□□ -1.4
PCDH9Q9HC56 AC016583.1-201ENST00000624221 2431 ntBASIC6.3□□□□□ -1.4
PCDH9Q9HC56 SMG1-201ENST00000330588 1588 ntTSL 5 BASIC6.3□□□□□ -1.4
PCDH9Q9HC56 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC6.3□□□□□ -1.4
PCDH9Q9HC56 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC6.3□□□□□ -1.4
PCDH9Q9HC56 ST7-203ENST00000393443 2360 ntTSL 2 BASIC6.3□□□□□ -1.4
PCDH9Q9HC56 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC6.3□□□□□ -1.4
PCDH9Q9HC56 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC6.3□□□□□ -1.4
PCDH9Q9HC56 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
PCDH9Q9HC56 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
PCDH9Q9HC56 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
PCDH9Q9HC56 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC6.29□□□□□ -1.4
PCDH9Q9HC56 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC6.29□□□□□ -1.4
PCDH9Q9HC56 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
PCDH9Q9HC56 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC6.29□□□□□ -1.4
PCDH9Q9HC56 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC6.29□□□□□ -1.4
PCDH9Q9HC56 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
PCDH9Q9HC56 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
PCDH9Q9HC56 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC6.29□□□□□ -1.4
PCDH9Q9HC56 SNORA77.2-201ENST00000408571 112 ntBASIC6.29□□□□□ -1.4
PCDH9Q9HC56 RPL7AP14-201ENST00000424041 802 ntBASIC6.29□□□□□ -1.4
PCDH9Q9HC56 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC6.29□□□□□ -1.4
PCDH9Q9HC56 MRPS21P3-201ENST00000436696 262 ntBASIC6.29□□□□□ -1.4
PCDH9Q9HC56 AL136455.1-201ENST00000441083 1240 ntBASIC6.29□□□□□ -1.4
PCDH9Q9HC56 DNAJC19P5-201ENST00000443295 316 ntBASIC6.29□□□□□ -1.4
PCDH9Q9HC56 RSL24D1P2-201ENST00000445584 366 ntBASIC6.29□□□□□ -1.4
PCDH9Q9HC56 AP000402.1-201ENST00000446404 540 ntTSL 3 BASIC6.29□□□□□ -1.4
PCDH9Q9HC56 AP002856.1-201ENST00000447864 562 ntTSL 4 BASIC6.29□□□□□ -1.4
PCDH9Q9HC56 AL451063.1-201ENST00000450164 1133 ntBASIC6.29□□□□□ -1.4
PCDH9Q9HC56 HIGD1AP16-201ENST00000450986 258 ntBASIC6.29□□□□□ -1.4
PCDH9Q9HC56 AL136982.3-201ENST00000454709 688 ntTSL 3 BASIC6.29□□□□□ -1.4
PCDH9Q9HC56 snoU13.29-201ENST00000459370 104 ntBASIC6.29□□□□□ -1.4
PCDH9Q9HC56 SYPL1-205ENST00000470347 1193 ntTSL 3 BASIC6.29□□□□□ -1.4
PCDH9Q9HC56 RPL5P16-201ENST00000471467 790 ntBASIC6.29□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms