Protein–RNA interactions for Protein: Q96NR3

PTCHD1, Patched domain-containing protein 1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1Q96NR3 KCND3-AS1-201ENST00000419258 383 ntTSL 3 BASIC6.7□□□□□ -1.34
PTCHD1Q96NR3 AC106870.2-201ENST00000421411 691 ntTSL 3 BASIC6.7□□□□□ -1.34
PTCHD1Q96NR3 OR4F29-201ENST00000426406 995 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
PTCHD1Q96NR3 RPS4XP16-201ENST00000427198 791 ntBASIC6.7□□□□□ -1.34
PTCHD1Q96NR3 AC098826.1-201ENST00000433943 471 ntBASIC6.7□□□□□ -1.34
PTCHD1Q96NR3 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC6.7□□□□□ -1.34
PTCHD1Q96NR3 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC6.7□□□□□ -1.34
PTCHD1Q96NR3 AC244505.3-201ENST00000454598 187 ntBASIC6.7□□□□□ -1.34
PTCHD1Q96NR3 NECAP1P2-201ENST00000455668 727 ntBASIC6.7□□□□□ -1.34
PTCHD1Q96NR3 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC6.7□□□□□ -1.34
PTCHD1Q96NR3 OR4F3-201ENST00000456475 995 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
PTCHD1Q96NR3 AC067817.2-201ENST00000459965 387 ntTSL 3 BASIC6.7□□□□□ -1.34
PTCHD1Q96NR3 MBNL1-213ENST00000465907 945 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
PTCHD1Q96NR3 AL591122.1-201ENST00000487348 492 ntBASIC6.7□□□□□ -1.34
PTCHD1Q96NR3 AC023050.1-201ENST00000498198 304 ntBASIC6.7□□□□□ -1.34
PTCHD1Q96NR3 AC105391.1-201ENST00000503155 1045 ntBASIC6.7□□□□□ -1.34
PTCHD1Q96NR3 TECRP2-201ENST00000503270 928 ntBASIC6.7□□□□□ -1.34
PTCHD1Q96NR3 LINC01182-201ENST00000503532 582 ntTSL 4 BASIC6.7□□□□□ -1.34
PTCHD1Q96NR3 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC6.7□□□□□ -1.34
PTCHD1Q96NR3 MTND3P5-201ENST00000512798 333 ntBASIC6.7□□□□□ -1.34
PTCHD1Q96NR3 AP001803.1-201ENST00000525668 147 ntBASIC6.7□□□□□ -1.34
PTCHD1Q96NR3 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC6.7□□□□□ -1.34
PTCHD1Q96NR3 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC6.7□□□□□ -1.34
PTCHD1Q96NR3 AC079089.1-203ENST00000533300 431 ntTSL 5 BASIC6.7□□□□□ -1.34
PTCHD1Q96NR3 LRTOMT-217ENST00000539587 428 ntTSL 2 BASIC6.7□□□□□ -1.34
PTCHD1Q96NR3 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC6.7□□□□□ -1.34
PTCHD1Q96NR3 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
PTCHD1Q96NR3 AC021979.2-201ENST00000553644 209 ntTSL 5 BASIC6.7□□□□□ -1.34
PTCHD1Q96NR3 MIR9-3HG-211ENST00000561037 779 ntTSL 5 BASIC6.7□□□□□ -1.34
PTCHD1Q96NR3 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC6.7□□□□□ -1.34
PTCHD1Q96NR3 AC022069.1-201ENST00000582910 658 ntBASIC6.7□□□□□ -1.34
PTCHD1Q96NR3 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC6.7□□□□□ -1.34
PTCHD1Q96NR3 ZNF677-211ENST00000601828 719 ntTSL 2 BASIC6.7□□□□□ -1.34
PTCHD1Q96NR3 SUMO2P14-201ENST00000604488 293 ntBASIC6.7□□□□□ -1.34
PTCHD1Q96NR3 AC122710.3-201ENST00000606566 541 ntBASIC6.7□□□□□ -1.34
PTCHD1Q96NR3 AC104184.1-201ENST00000607513 721 ntBASIC6.7□□□□□ -1.34
PTCHD1Q96NR3 LRMDA-216ENST00000611306 393 ntAPPRIS ALT2 TSL 5 BASIC6.7□□□□□ -1.34
PTCHD1Q96NR3 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC6.7□□□□□ -1.34
PTCHD1Q96NR3 Z69908.1-201ENST00000622603 247 ntBASIC6.7□□□□□ -1.34
PTCHD1Q96NR3 RMDN2-AS1-210ENST00000630021 1053 ntTSL 5 BASIC6.7□□□□□ -1.34
PTCHD1Q96NR3 AC026108.1-201ENST00000635444 547 ntBASIC6.7□□□□□ -1.34
PTCHD1Q96NR3 AL353572.3-201ENST00000636536 670 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
PTCHD1Q96NR3 AL392088.2-201ENST00000637607 285 ntBASIC6.7□□□□□ -1.34
PTCHD1Q96NR3 AL139254.2-202ENST00000641937 1156 ntBASIC6.7□□□□□ -1.34
PTCHD1Q96NR3 AGXT2-201ENST00000231420 2364 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
PTCHD1Q96NR3 GPATCH2-202ENST00000366935 5851 ntAPPRIS P1 TSL 2 BASIC6.7□□□□□ -1.34
PTCHD1Q96NR3 AL356361.1-201ENST00000400943 1459 ntBASIC6.7□□□□□ -1.34
PTCHD1Q96NR3 SEC23IP-208ENST00000543134 1461 ntTSL 5 BASIC6.7□□□□□ -1.34
PTCHD1Q96NR3 CR382285.2-201ENST00000624662 1495 ntBASIC6.7□□□□□ -1.34
PTCHD1Q96NR3 AL022068.1-201ENST00000636202 1875 ntTSL 5 BASIC6.7□□□□□ -1.34
PTCHD1Q96NR3 ERICH3-202ENST00000420661 2068 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
PTCHD1Q96NR3 MKL2-201ENST00000318282 8608 ntAPPRIS P3 TSL 5 BASIC6.7□□□□□ -1.34
PTCHD1Q96NR3 OR7C1-205ENST00000642030 11778 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
PTCHD1Q96NR3 AC006600.2-201ENST00000624834 2506 ntBASIC6.7□□□□□ -1.34
PTCHD1Q96NR3 FOXJ3-203ENST00000372571 4468 ntTSL 2 BASIC6.7□□□□□ -1.34
PTCHD1Q96NR3 SALL4P7-201ENST00000555779 3120 ntBASIC6.7□□□□□ -1.34
PTCHD1Q96NR3 MRPS17P1-201ENST00000596009 3130 ntBASIC6.7□□□□□ -1.34
PTCHD1Q96NR3 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC6.69□□□□□ -1.34
PTCHD1Q96NR3 OR4C1P-202ENST00000641065 1569 ntBASIC6.69□□□□□ -1.34
PTCHD1Q96NR3 POF1B-202ENST00000373145 1972 ntAPPRIS ALT2 TSL 1 (best) BASIC6.69□□□□□ -1.34
PTCHD1Q96NR3 LRRC31-201ENST00000264676 2355 ntAPPRIS ALT2 TSL 2 BASIC6.69□□□□□ -1.34
PTCHD1Q96NR3 ASAH1-267ENST00000637991 2399 ntTSL 5 BASIC6.69□□□□□ -1.34
PTCHD1Q96NR3 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC6.69□□□□□ -1.34
PTCHD1Q96NR3 MAP4K4-221ENST00000634702 3800 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
PTCHD1Q96NR3 TMC5-208ENST00000564959 2434 ntTSL 2 BASIC6.69□□□□□ -1.34
PTCHD1Q96NR3 AL034417.4-202ENST00000642135 2236 ntBASIC6.69□□□□□ -1.34
PTCHD1Q96NR3 DYDC2-201ENST00000256039 1842 ntAPPRIS P3 TSL 2 BASIC6.69□□□□□ -1.34
PTCHD1Q96NR3 ANKRD17-203ENST00000509867 8105 ntAPPRIS ALT2 TSL 1 (best) BASIC6.69□□□□□ -1.34
PTCHD1Q96NR3 EEF1A1P28-201ENST00000450915 1403 ntBASIC6.69□□□□□ -1.34
PTCHD1Q96NR3 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
PTCHD1Q96NR3 AC005702.3-201ENST00000585345 1447 ntBASIC6.69□□□□□ -1.34
PTCHD1Q96NR3 MAPK10-207ENST00000395166 3085 ntAPPRIS P2 TSL 2 BASIC6.69□□□□□ -1.34
PTCHD1Q96NR3 NXF2B-204ENST00000618302 2884 ntAPPRIS P1 TSL 2 BASIC6.69□□□□□ -1.34
PTCHD1Q96NR3 LINC02347-201ENST00000397346 2458 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
PTCHD1Q96NR3 KLHL2-202ENST00000421009 2452 ntTSL 5 BASIC6.69□□□□□ -1.34
PTCHD1Q96NR3 FBXO7-202ENST00000397426 1888 ntTSL 2 BASIC6.69□□□□□ -1.34
PTCHD1Q96NR3 ZMYND11-215ENST00000558098 1859 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
PTCHD1Q96NR3 AL450423.1-201ENST00000615176 1857 ntTSL 2 BASIC6.69□□□□□ -1.34
PTCHD1Q96NR3 RNF213-220ENST00000582970 21055 ntAPPRIS P2 TSL 1 (best) BASIC6.69□□□□□ -1.34
PTCHD1Q96NR3 PPHLN1-207ENST00000432191 3377 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
PTCHD1Q96NR3 SEC61G-201ENST00000352861 462 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
PTCHD1Q96NR3 RNA5SP302-201ENST00000364896 100 ntBASIC6.69□□□□□ -1.34
PTCHD1Q96NR3 MIR431-201ENST00000385266 114 ntBASIC6.69□□□□□ -1.34
PTCHD1Q96NR3 RPL5P5-201ENST00000392009 893 ntBASIC6.69□□□□□ -1.34
PTCHD1Q96NR3 RPL10P10-201ENST00000403509 664 ntBASIC6.69□□□□□ -1.34
PTCHD1Q96NR3 AL445213.1-201ENST00000412589 747 ntBASIC6.69□□□□□ -1.34
PTCHD1Q96NR3 BTF3P8-201ENST00000414577 526 ntBASIC6.69□□□□□ -1.34
PTCHD1Q96NR3 VDAC1P10-201ENST00000416715 891 ntBASIC6.69□□□□□ -1.34
PTCHD1Q96NR3 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC6.69□□□□□ -1.34
PTCHD1Q96NR3 RPL5P34-201ENST00000426545 891 ntBASIC6.69□□□□□ -1.34
PTCHD1Q96NR3 AC005189.1-201ENST00000431286 310 ntBASIC6.69□□□□□ -1.34
PTCHD1Q96NR3 FTLP17-201ENST00000432567 525 ntBASIC6.69□□□□□ -1.34
PTCHD1Q96NR3 AL035691.1-201ENST00000434562 595 ntTSL 3 BASIC6.69□□□□□ -1.34
PTCHD1Q96NR3 AL354983.1-201ENST00000434580 906 ntBASIC6.69□□□□□ -1.34
PTCHD1Q96NR3 LINC01762-205ENST00000437308 539 ntTSL 3 BASIC6.69□□□□□ -1.34
PTCHD1Q96NR3 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC6.69□□□□□ -1.34
PTCHD1Q96NR3 RPS7P4-201ENST00000444127 582 ntBASIC6.69□□□□□ -1.34
PTCHD1Q96NR3 AC083864.2-201ENST00000446024 482 ntTSL 3 BASIC6.69□□□□□ -1.34
PTCHD1Q96NR3 AC108463.2-201ENST00000451230 412 ntTSL 5 BASIC6.69□□□□□ -1.34
PTCHD1Q96NR3 LINC01839-201ENST00000451348 727 ntTSL 3 BASIC6.69□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms