Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 RPS27AP3-201ENST00000453803 454 ntBASIC7.01□□□□□ -1.29
HPS3Q969F9 RBMY2HP-201ENST00000457961 720 ntBASIC7.01□□□□□ -1.29
HPS3Q969F9 AC090543.1-201ENST00000492168 485 ntBASIC7.01□□□□□ -1.29
HPS3Q969F9 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC7.01□□□□□ -1.29
HPS3Q969F9 CAB39P1-201ENST00000502277 460 ntBASIC7.01□□□□□ -1.29
HPS3Q969F9 GBA3-201ENST00000503442 1232 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
HPS3Q969F9 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC7.01□□□□□ -1.29
HPS3Q969F9 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC7.01□□□□□ -1.29
HPS3Q969F9 NACAP5-201ENST00000509863 636 ntBASIC7.01□□□□□ -1.29
HPS3Q969F9 AC106800.3-201ENST00000511389 308 ntBASIC7.01□□□□□ -1.29
HPS3Q969F9 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC7.01□□□□□ -1.29
HPS3Q969F9 UBE2N-204ENST00000549833 960 ntTSL 3 BASIC7.01□□□□□ -1.29
HPS3Q969F9 COPZ1-218ENST00000553231 551 ntTSL 5 BASIC7.01□□□□□ -1.29
HPS3Q969F9 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
HPS3Q969F9 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC7.01□□□□□ -1.29
HPS3Q969F9 AC023968.1-201ENST00000560719 475 ntBASIC7.01□□□□□ -1.29
HPS3Q969F9 AC009120.3-201ENST00000563335 499 ntBASIC7.01□□□□□ -1.29
HPS3Q969F9 MIR3157-201ENST00000578688 85 ntBASIC7.01□□□□□ -1.29
HPS3Q969F9 MIR3189-201ENST00000578735 73 ntBASIC7.01□□□□□ -1.29
HPS3Q969F9 AC027229.1-201ENST00000583887 253 ntBASIC7.01□□□□□ -1.29
HPS3Q969F9 AC005180.2-201ENST00000585620 562 ntTSL 3 BASIC7.01□□□□□ -1.29
HPS3Q969F9 AC091769.2-201ENST00000605385 479 ntTSL 4 BASIC7.01□□□□□ -1.29
HPS3Q969F9 AC007100.1-201ENST00000606382 478 ntTSL 5 BASIC7.01□□□□□ -1.29
HPS3Q969F9 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC7.01□□□□□ -1.29
HPS3Q969F9 AL359742.1-201ENST00000622497 540 ntBASIC7.01□□□□□ -1.29
HPS3Q969F9 AL161457.2-202ENST00000629161 743 ntTSL 5 BASIC7.01□□□□□ -1.29
HPS3Q969F9 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC7.01□□□□□ -1.29
HPS3Q969F9 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC7.01□□□□□ -1.29
HPS3Q969F9 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC7.01□□□□□ -1.29
HPS3Q969F9 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC7.01□□□□□ -1.29
HPS3Q969F9 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC7.01□□□□□ -1.29
HPS3Q969F9 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC7.01□□□□□ -1.29
HPS3Q969F9 ZNF101P1-201ENST00000435701 1720 ntBASIC7.01□□□□□ -1.29
HPS3Q969F9 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
HPS3Q969F9 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC7.01□□□□□ -1.29
HPS3Q969F9 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC7.01□□□□□ -1.29
HPS3Q969F9 AC124312.1-201ENST00000551312 1325 ntAPPRIS P5 TSL 5 BASIC7.01□□□□□ -1.29
HPS3Q969F9 LINC02318-201ENST00000553785 1334 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
HPS3Q969F9 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC7.01□□□□□ -1.29
HPS3Q969F9 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC7□□□□□ -1.29
HPS3Q969F9 PRDM2-202ENST00000311066 7437 ntAPPRIS ALT2 TSL 5 BASIC7□□□□□ -1.29
HPS3Q969F9 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC7□□□□□ -1.29
HPS3Q969F9 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
HPS3Q969F9 AC006511.3-201ENST00000624929 1783 ntBASIC7□□□□□ -1.29
HPS3Q969F9 CD200R1-201ENST00000295863 1692 ntTSL 2 BASIC7□□□□□ -1.29
HPS3Q969F9 DHRS9-205ENST00000432060 1652 ntTSL 2 BASIC7□□□□□ -1.29
HPS3Q969F9 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC7□□□□□ -1.29
HPS3Q969F9 SULF1-201ENST00000260128 5710 ntAPPRIS P1 TSL 5 BASIC7□□□□□ -1.29
HPS3Q969F9 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC7□□□□□ -1.29
HPS3Q969F9 KIF1B-204ENST00000377086 10669 ntTSL 1 (best) BASIC7□□□□□ -1.29
HPS3Q969F9 ALG10-201ENST00000266483 3128 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
HPS3Q969F9 NAT1-209ENST00000541942 1948 ntAPPRIS P1 TSL 3 BASIC7□□□□□ -1.29
HPS3Q969F9 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
HPS3Q969F9 RERGL-201ENST00000229002 1147 ntTSL 1 (best) BASIC7□□□□□ -1.29
HPS3Q969F9 RPS29-201ENST00000245458 296 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
HPS3Q969F9 PSMD10-206ENST00000372296 878 ntTSL 5 BASIC7□□□□□ -1.29
HPS3Q969F9 IGHV6-1-201ENST00000390593 415 ntAPPRIS P1 BASIC7□□□□□ -1.29
HPS3Q969F9 RNU6-1176P-201ENST00000390955 107 ntBASIC7□□□□□ -1.29
HPS3Q969F9 LINC01058-201ENST00000420694 448 ntTSL 5 BASIC7□□□□□ -1.29
HPS3Q969F9 LINC01031-201ENST00000420807 779 ntTSL 3 BASIC7□□□□□ -1.29
HPS3Q969F9 AL121902.1-201ENST00000426963 459 ntTSL 2 BASIC7□□□□□ -1.29
HPS3Q969F9 MTCO1P45-201ENST00000431457 267 ntBASIC7□□□□□ -1.29
HPS3Q969F9 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC7□□□□□ -1.29
HPS3Q969F9 E2F3-IT1-201ENST00000433182 400 ntTSL 3 BASIC7□□□□□ -1.29
HPS3Q969F9 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC7□□□□□ -1.29
HPS3Q969F9 BBIP1-205ENST00000436562 383 ntAPPRIS P1 TSL 3 BASIC7□□□□□ -1.29
HPS3Q969F9 LINC02384-202ENST00000441255 567 ntTSL 4 BASIC7□□□□□ -1.29
HPS3Q969F9 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC7□□□□□ -1.29
HPS3Q969F9 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC7□□□□□ -1.29
HPS3Q969F9 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC7□□□□□ -1.29
HPS3Q969F9 AC015908.1-201ENST00000478739 476 ntBASIC7□□□□□ -1.29
HPS3Q969F9 SSR3-208ENST00000496050 579 ntTSL 4 BASIC7□□□□□ -1.29
HPS3Q969F9 AC008957.1-203ENST00000508745 589 ntTSL 3 BASIC7□□□□□ -1.29
HPS3Q969F9 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC7□□□□□ -1.29
HPS3Q969F9 HMGB1P47-201ENST00000511281 589 ntBASIC7□□□□□ -1.29
HPS3Q969F9 AC138517.1-201ENST00000515724 568 ntBASIC7□□□□□ -1.29
HPS3Q969F9 IGHV1-14-201ENST00000523391 241 ntBASIC7□□□□□ -1.29
HPS3Q969F9 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC7□□□□□ -1.29
HPS3Q969F9 AC008055.1-201ENST00000547032 609 ntBASIC7□□□□□ -1.29
HPS3Q969F9 AC027176.2-201ENST00000559166 746 ntBASIC7□□□□□ -1.29
HPS3Q969F9 MIMT1-201ENST00000597105 1050 ntBASIC7□□□□□ -1.29
HPS3Q969F9 BNIP3P39-201ENST00000601077 554 ntBASIC7□□□□□ -1.29
HPS3Q969F9 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC7□□□□□ -1.29
HPS3Q969F9 HMGB1P51-201ENST00000605166 638 ntBASIC7□□□□□ -1.29
HPS3Q969F9 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC7□□□□□ -1.29
HPS3Q969F9 AC004836.1-201ENST00000623032 634 ntBASIC7□□□□□ -1.29
HPS3Q969F9 OR7E91P-202ENST00000642062 1198 ntBASIC7□□□□□ -1.29
HPS3Q969F9 POLR1A-201ENST00000263857 12749 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
HPS3Q969F9 PUM2-201ENST00000319801 6002 ntTSL 1 (best) BASIC7□□□□□ -1.29
HPS3Q969F9 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
HPS3Q969F9 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC7□□□□□ -1.29
HPS3Q969F9 ADAM7-204ENST00000520720 1870 ntTSL 1 (best) BASIC7□□□□□ -1.29
HPS3Q969F9 CYLD-210ENST00000566206 3104 ntTSL 1 (best) BASIC7□□□□□ -1.29
HPS3Q969F9 AL136984.1-201ENST00000607611 1893 ntBASIC7□□□□□ -1.29
HPS3Q969F9 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC7□□□□□ -1.29
HPS3Q969F9 AP001541.1-201ENST00000623322 1904 ntBASIC6.99□□□□□ -1.29
HPS3Q969F9 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
HPS3Q969F9 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
HPS3Q969F9 RBMS2-202ENST00000542360 1484 ntTSL 2 BASIC6.99□□□□□ -1.29
HPS3Q969F9 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC6.99□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 88 ms