Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 RNA5SP230-201ENST00000517039 122 ntBASIC5.24□□□□□ -1.57
AP3S1Q92572 IGKV1OR22-1-201ENST00000521497 360 ntBASIC5.24□□□□□ -1.57
AP3S1Q92572 AC107952.1-201ENST00000524200 376 ntBASIC5.24□□□□□ -1.57
AP3S1Q92572 MIR4800-201ENST00000537353 80 ntBASIC5.24□□□□□ -1.57
AP3S1Q92572 WBP2NL-210ENST00000543212 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
AP3S1Q92572 KLRD1-210ENST00000543777 789 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
AP3S1Q92572 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC5.24□□□□□ -1.57
AP3S1Q92572 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC5.24□□□□□ -1.57
AP3S1Q92572 AC026956.1-201ENST00000558741 396 ntBASIC5.24□□□□□ -1.57
AP3S1Q92572 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC5.24□□□□□ -1.57
AP3S1Q92572 AL132640.2-202ENST00000559732 614 ntBASIC5.24□□□□□ -1.57
AP3S1Q92572 AC025040.1-201ENST00000560375 1284 ntTSL 2 BASIC5.24□□□□□ -1.57
AP3S1Q92572 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC5.24□□□□□ -1.57
AP3S1Q92572 MIR4660-201ENST00000583549 74 ntBASIC5.24□□□□□ -1.57
AP3S1Q92572 AC119403.2-201ENST00000590960 598 ntBASIC5.24□□□□□ -1.57
AP3S1Q92572 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
AP3S1Q92572 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC5.24□□□□□ -1.57
AP3S1Q92572 AC008555.7-201ENST00000605008 583 ntBASIC5.24□□□□□ -1.57
AP3S1Q92572 AC114477.1-201ENST00000605097 605 ntBASIC5.24□□□□□ -1.57
AP3S1Q92572 AC092944.2-201ENST00000605443 889 ntBASIC5.24□□□□□ -1.57
AP3S1Q92572 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC5.24□□□□□ -1.57
AP3S1Q92572 GMDS-AS1-215ENST00000606884 580 ntTSL 2 BASIC5.24□□□□□ -1.57
AP3S1Q92572 AC010998.3-201ENST00000613871 631 ntBASIC5.24□□□□□ -1.57
AP3S1Q92572 BX005040.2-201ENST00000620504 370 ntBASIC5.24□□□□□ -1.57
AP3S1Q92572 METTL15-210ENST00000634721 1182 ntTSL 5 BASIC5.24□□□□□ -1.57
AP3S1Q92572 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
AP3S1Q92572 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
AP3S1Q92572 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC5.24□□□□□ -1.57
AP3S1Q92572 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
AP3S1Q92572 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC5.24□□□□□ -1.57
AP3S1Q92572 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC5.24□□□□□ -1.57
AP3S1Q92572 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
AP3S1Q92572 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.24□□□□□ -1.57
AP3S1Q92572 TMOD2-203ENST00000539962 3000 ntTSL 2 BASIC5.23□□□□□ -1.57
AP3S1Q92572 EEF1A1P28-201ENST00000450915 1403 ntBASIC5.23□□□□□ -1.57
AP3S1Q92572 ABCC13-202ENST00000463099 3842 ntBASIC5.23□□□□□ -1.57
AP3S1Q92572 AC010266.2-201ENST00000564741 3255 ntBASIC5.23□□□□□ -1.57
AP3S1Q92572 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC5.23□□□□□ -1.57
AP3S1Q92572 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
AP3S1Q92572 TEX11-202ENST00000374320 2224 ntTSL 2 BASIC5.23□□□□□ -1.57
AP3S1Q92572 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
AP3S1Q92572 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
AP3S1Q92572 RNU1-49P-201ENST00000363468 159 ntBASIC5.23□□□□□ -1.57
AP3S1Q92572 RNA5SP279-201ENST00000365513 117 ntBASIC5.23□□□□□ -1.57
AP3S1Q92572 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
AP3S1Q92572 TPT1-204ENST00000379060 764 ntTSL 5 BASIC5.23□□□□□ -1.57
AP3S1Q92572 HOPX-204ENST00000381260 1141 ntTSL 3 BASIC5.23□□□□□ -1.57
AP3S1Q92572 TOMM6-202ENST00000398884 637 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
AP3S1Q92572 SNX18P13-201ENST00000412442 529 ntBASIC5.23□□□□□ -1.57
AP3S1Q92572 AL606804.1-201ENST00000435333 538 ntTSL 3 BASIC5.23□□□□□ -1.57
AP3S1Q92572 AL445623.1-201ENST00000440888 237 ntTSL 3 BASIC5.23□□□□□ -1.57
AP3S1Q92572 AL020997.1-201ENST00000446554 349 ntBASIC5.23□□□□□ -1.57
AP3S1Q92572 AL445228.1-201ENST00000449525 333 ntTSL 3 BASIC5.23□□□□□ -1.57
AP3S1Q92572 LINC02503-201ENST00000510505 812 ntTSL 2 BASIC5.23□□□□□ -1.57
AP3S1Q92572 GAPDHP62-201ENST00000515313 990 ntBASIC5.23□□□□□ -1.57
AP3S1Q92572 AC105150.1-201ENST00000518011 551 ntTSL 3 BASIC5.23□□□□□ -1.57
AP3S1Q92572 AP001858.2-201ENST00000536213 601 ntBASIC5.23□□□□□ -1.57
AP3S1Q92572 AL359219.2-201ENST00000555184 348 ntBASIC5.23□□□□□ -1.57
AP3S1Q92572 AC026770.1-201ENST00000558994 581 ntTSL 4 BASIC5.23□□□□□ -1.57
AP3S1Q92572 LINC01917-201ENST00000565170 1037 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
AP3S1Q92572 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC5.23□□□□□ -1.57
AP3S1Q92572 AC107993.1-201ENST00000591343 684 ntBASIC5.23□□□□□ -1.57
AP3S1Q92572 RPS11-205ENST00000599561 430 ntTSL 5 BASIC5.23□□□□□ -1.57
AP3S1Q92572 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
AP3S1Q92572 NANOGP3-201ENST00000605855 286 ntBASIC5.23□□□□□ -1.57
AP3S1Q92572 OR51C1P-201ENST00000608504 942 ntBASIC5.23□□□□□ -1.57
AP3S1Q92572 AL162574.1-201ENST00000615702 950 ntBASIC5.23□□□□□ -1.57
AP3S1Q92572 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC5.23□□□□□ -1.57
AP3S1Q92572 HBG1-202ENST00000632727 369 ntTSL 3 BASIC5.23□□□□□ -1.57
AP3S1Q92572 MAPK10-328ENST00000641553 4009 ntBASIC5.23□□□□□ -1.57
AP3S1Q92572 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
AP3S1Q92572 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
AP3S1Q92572 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC5.23□□□□□ -1.57
AP3S1Q92572 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
AP3S1Q92572 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC5.23□□□□□ -1.57
AP3S1Q92572 AC093849.1-201ENST00000563631 2209 ntBASIC5.23□□□□□ -1.57
AP3S1Q92572 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC5.23□□□□□ -1.57
AP3S1Q92572 UQCRC2-202ENST00000561553 1415 ntTSL 5 BASIC5.23□□□□□ -1.57
AP3S1Q92572 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
AP3S1Q92572 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
AP3S1Q92572 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
AP3S1Q92572 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
AP3S1Q92572 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC5.22□□□□□ -1.57
AP3S1Q92572 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC5.22□□□□□ -1.57
AP3S1Q92572 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
AP3S1Q92572 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
AP3S1Q92572 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.22□□□□□ -1.57
AP3S1Q92572 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
AP3S1Q92572 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.22□□□□□ -1.57
AP3S1Q92572 AC095038.1-201ENST00000429248 1591 ntBASIC5.22□□□□□ -1.57
AP3S1Q92572 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
AP3S1Q92572 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
AP3S1Q92572 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.22□□□□□ -1.57
AP3S1Q92572 VNN3-201ENST00000275223 1260 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
AP3S1Q92572 C5orf63-201ENST00000296662 966 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
AP3S1Q92572 FAM183A-201ENST00000335282 488 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
AP3S1Q92572 RNA5SP375-201ENST00000362975 119 ntBASIC5.22□□□□□ -1.57
AP3S1Q92572 RNA5SP140-201ENST00000364524 92 ntBASIC5.22□□□□□ -1.57
AP3S1Q92572 LYZL1-201ENST00000375500 815 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
AP3S1Q92572 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 68.7 ms