Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC8.97□□□□□ -0.97
VARS2Q5ST30 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC8.97□□□□□ -0.97
VARS2Q5ST30 GS1-279B7.1-201ENST00000562817 399 ntTSL 5 BASIC8.97□□□□□ -0.97
VARS2Q5ST30 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC8.97□□□□□ -0.97
VARS2Q5ST30 ZNF585B-207ENST00000586320 403 ntTSL 3 BASIC8.97□□□□□ -0.97
VARS2Q5ST30 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC8.97□□□□□ -0.97
VARS2Q5ST30 AC010320.1-201ENST00000599775 578 ntTSL 3 BASIC8.97□□□□□ -0.97
VARS2Q5ST30 AL592436.1-201ENST00000605135 558 ntBASIC8.97□□□□□ -0.97
VARS2Q5ST30 AC018695.5-201ENST00000605872 315 ntBASIC8.97□□□□□ -0.97
VARS2Q5ST30 TRBV10-3-201ENST00000611462 368 ntAPPRIS P1 BASIC8.97□□□□□ -0.97
VARS2Q5ST30 AC138904.2-201ENST00000614412 107 ntBASIC8.97□□□□□ -0.97
VARS2Q5ST30 AC245033.3-201ENST00000617986 224 ntBASIC8.97□□□□□ -0.97
VARS2Q5ST30 AC068722.2-201ENST00000618734 544 ntBASIC8.97□□□□□ -0.97
VARS2Q5ST30 OR1N1-202ENST00000619659 939 ntBASIC8.97□□□□□ -0.97
VARS2Q5ST30 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC8.97□□□□□ -0.97
VARS2Q5ST30 TEX46-203ENST00000622840 479 ntAPPRIS ALT2 TSL 5 BASIC8.97□□□□□ -0.97
VARS2Q5ST30 FKBP14-201ENST00000222803 4960 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
VARS2Q5ST30 MLANA-203ENST00000381477 2415 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
VARS2Q5ST30 AL353583.1-201ENST00000624195 1855 ntBASIC8.97□□□□□ -0.97
VARS2Q5ST30 PIGN-251ENST00000640876 6045 ntAPPRIS P1 TSL 5 BASIC8.97□□□□□ -0.97
VARS2Q5ST30 ZNF317-202ENST00000360385 3955 ntAPPRIS ALT2 TSL 1 (best) BASIC8.97□□□□□ -0.97
VARS2Q5ST30 PRLR-208ENST00000509140 1610 ntTSL 5 BASIC8.97□□□□□ -0.97
VARS2Q5ST30 CDK1-203ENST00000395284 1913 ntAPPRIS P2 TSL 1 (best) BASIC8.97□□□□□ -0.97
VARS2Q5ST30 MTA3-205ENST00000407270 2202 ntAPPRIS P2 TSL 1 (best) BASIC8.97□□□□□ -0.97
VARS2Q5ST30 ARMC3-201ENST00000298032 2811 ntAPPRIS P3 TSL 1 (best) BASIC8.97□□□□□ -0.97
VARS2Q5ST30 MUC20-204ENST00000445522 2842 ntAPPRIS ALT2 TSL 2 BASIC8.97□□□□□ -0.97
VARS2Q5ST30 ADGRG6-201ENST00000230173 7026 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
VARS2Q5ST30 SP110-215ENST00000540870 2032 ntTSL 2 BASIC8.97□□□□□ -0.97
VARS2Q5ST30 CLEC1A-201ENST00000315330 2685 ntAPPRIS P3 TSL 1 (best) BASIC8.97□□□□□ -0.97
VARS2Q5ST30 CYP1D1P-201ENST00000416662 1433 ntBASIC8.97□□□□□ -0.97
VARS2Q5ST30 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
VARS2Q5ST30 DOCK11-202ENST00000276204 6664 ntAPPRIS ALT1 TSL 5 BASIC8.96□□□□□ -0.97
VARS2Q5ST30 SLC36A3-201ENST00000335230 2456 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
VARS2Q5ST30 AC104051.2-201ENST00000518934 2461 ntTSL 1 (best) BASIC8.96□□□□□ -0.97
VARS2Q5ST30 NVL-203ENST00000391875 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC8.96□□□□□ -0.97
VARS2Q5ST30 HTR2A-201ENST00000378688 4835 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
VARS2Q5ST30 ITIH2-201ENST00000358415 3193 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
VARS2Q5ST30 SH3YL1-202ENST00000402632 3151 ntTSL 1 (best) BASIC8.96□□□□□ -0.97
VARS2Q5ST30 CABLES1-202ENST00000400473 1544 ntAPPRIS ALT2 TSL 2 BASIC8.96□□□□□ -0.97
VARS2Q5ST30 RAB2B-201ENST00000397762 2928 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
VARS2Q5ST30 ADAL-201ENST00000389651 1559 ntTSL 1 (best) BASIC8.96□□□□□ -0.97
VARS2Q5ST30 FHL5-203ENST00000541107 1904 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
VARS2Q5ST30 SELENON-205ENST00000630065 2994 ntTSL 1 (best) BASIC8.96□□□□□ -0.97
VARS2Q5ST30 C4orf46-202ENST00000508457 3358 ntTSL 5 BASIC8.96□□□□□ -0.97
VARS2Q5ST30 HAUS6-201ENST00000380496 3756 ntTSL 2 BASIC8.96□□□□□ -0.98
VARS2Q5ST30 OR5D18-201ENST00000333976 991 ntAPPRIS P1 BASIC8.96□□□□□ -0.98
VARS2Q5ST30 FCAR-201ENST00000345937 608 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
VARS2Q5ST30 RNA5SP301-201ENST00000362537 121 ntBASIC8.96□□□□□ -0.98
VARS2Q5ST30 RNU6-543P-201ENST00000362576 108 ntBASIC8.96□□□□□ -0.98
VARS2Q5ST30 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC8.96□□□□□ -0.98
VARS2Q5ST30 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC8.96□□□□□ -0.98
VARS2Q5ST30 MIR30C1-201ENST00000385227 89 ntBASIC8.96□□□□□ -0.98
VARS2Q5ST30 SNORD86-201ENST00000391196 86 ntBASIC8.96□□□□□ -0.98
VARS2Q5ST30 AC092642.1-201ENST00000392417 425 ntBASIC8.96□□□□□ -0.98
VARS2Q5ST30 AL356432.2-201ENST00000407841 422 ntBASIC8.96□□□□□ -0.98
VARS2Q5ST30 AL356968.2-201ENST00000412769 1257 ntBASIC8.96□□□□□ -0.98
VARS2Q5ST30 VDAC1P6-201ENST00000430062 855 ntBASIC8.96□□□□□ -0.98
VARS2Q5ST30 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC8.96□□□□□ -0.98
VARS2Q5ST30 AL049734.2-201ENST00000441066 616 ntBASIC8.96□□□□□ -0.98
VARS2Q5ST30 RPL32P28-201ENST00000443577 397 ntBASIC8.96□□□□□ -0.98
VARS2Q5ST30 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC8.96□□□□□ -0.98
VARS2Q5ST30 C1DP4-201ENST00000455429 424 ntBASIC8.96□□□□□ -0.98
VARS2Q5ST30 RPS27P12-201ENST00000464146 258 ntBASIC8.96□□□□□ -0.98
VARS2Q5ST30 RN7SL37P-201ENST00000490461 307 ntBASIC8.96□□□□□ -0.98
VARS2Q5ST30 HSPD1P18-201ENST00000504252 244 ntBASIC8.96□□□□□ -0.98
VARS2Q5ST30 AC024558.1-201ENST00000505008 528 ntBASIC8.96□□□□□ -0.98
VARS2Q5ST30 RNU6-559P-201ENST00000516151 98 ntBASIC8.96□□□□□ -0.98
VARS2Q5ST30 RNU6-764P-201ENST00000516396 105 ntBASIC8.96□□□□□ -0.98
VARS2Q5ST30 SNORA70.23-201ENST00000517218 151 ntBASIC8.96□□□□□ -0.98
VARS2Q5ST30 AC123788.1-201ENST00000526922 783 ntTSL 3 BASIC8.96□□□□□ -0.98
VARS2Q5ST30 OR4A7P-201ENST00000531463 910 ntBASIC8.96□□□□□ -0.98
VARS2Q5ST30 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC8.96□□□□□ -0.98
VARS2Q5ST30 AL163153.1-201ENST00000554223 283 ntBASIC8.96□□□□□ -0.98
VARS2Q5ST30 AC079075.2-201ENST00000557964 449 ntTSL 4 BASIC8.96□□□□□ -0.98
VARS2Q5ST30 AC020687.1-201ENST00000560439 448 ntTSL 3 BASIC8.96□□□□□ -0.98
VARS2Q5ST30 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC8.96□□□□□ -0.98
VARS2Q5ST30 TUBAP4-201ENST00000569261 416 ntBASIC8.96□□□□□ -0.98
VARS2Q5ST30 AC025198.1-201ENST00000578331 419 ntBASIC8.96□□□□□ -0.98
VARS2Q5ST30 MIR4742-201ENST00000581069 85 ntBASIC8.96□□□□□ -0.98
VARS2Q5ST30 RN7SL619P-201ENST00000581753 258 ntBASIC8.96□□□□□ -0.98
VARS2Q5ST30 RN7SL468P-201ENST00000582256 294 ntBASIC8.96□□□□□ -0.98
VARS2Q5ST30 AC007785.1-201ENST00000597989 332 ntTSL 5 BASIC8.96□□□□□ -0.98
VARS2Q5ST30 OR7E94P-202ENST00000601375 790 ntBASIC8.96□□□□□ -0.98
VARS2Q5ST30 CASC15-205ENST00000606336 1288 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
VARS2Q5ST30 TTC23L-208ENST00000610313 973 ntAPPRIS ALT2 TSL 1 (best) BASIC8.96□□□□□ -0.98
VARS2Q5ST30 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC8.96□□□□□ -0.98
VARS2Q5ST30 AL445670.1-201ENST00000618889 801 ntBASIC8.96□□□□□ -0.98
VARS2Q5ST30 U2.1-201ENST00000618978 145 ntBASIC8.96□□□□□ -0.98
VARS2Q5ST30 AL136967.1-201ENST00000625120 441 ntBASIC8.96□□□□□ -0.98
VARS2Q5ST30 AC087885.1-201ENST00000641910 848 ntBASIC8.96□□□□□ -0.98
VARS2Q5ST30 SPATA31E3P-201ENST00000613133 4214 ntBASIC8.96□□□□□ -0.98
VARS2Q5ST30 ANKUB1-201ENST00000446160 2419 ntAPPRIS P1 TSL 5 BASIC8.96□□□□□ -0.98
VARS2Q5ST30 ZSCAN31-202ENST00000396838 3176 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
VARS2Q5ST30 KATNAL2-201ENST00000245121 2833 ntAPPRIS P2 TSL 1 (best) BASIC8.96□□□□□ -0.98
VARS2Q5ST30 DOCK8-209ENST00000469391 6386 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
VARS2Q5ST30 LINC00486-201ENST00000414054 1794 ntTSL 4 BASIC8.96□□□□□ -0.98
VARS2Q5ST30 KIF13A-204ENST00000378826 5747 ntAPPRIS ALT2 TSL 1 (best) BASIC8.96□□□□□ -0.98
VARS2Q5ST30 RDH11-201ENST00000381346 2588 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
VARS2Q5ST30 RBBP5-202ENST00000367164 4290 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
VARS2Q5ST30 OPTN-204ENST00000378752 3488 ntAPPRIS ALT1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Retrieved 100 of 98,524 protein–RNA pairs in 91.3 ms