Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC7.31□□□□□ -1.24
RFX7Q2KHR2 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
RFX7Q2KHR2 ITGA1-201ENST00000282588 10757 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
RFX7Q2KHR2 LUZP1-203ENST00000418342 8421 ntAPPRIS P1 TSL 5 BASIC7.31□□□□□ -1.24
RFX7Q2KHR2 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC7.31□□□□□ -1.24
RFX7Q2KHR2 MDM4-216ENST00000616250 9597 ntTSL 5 BASIC7.31□□□□□ -1.24
RFX7Q2KHR2 AL359976.1-201ENST00000418655 3528 ntBASIC7.31□□□□□ -1.24
RFX7Q2KHR2 GNL2P1-201ENST00000451274 2190 ntBASIC7.31□□□□□ -1.24
RFX7Q2KHR2 AC007402.1-201ENST00000440698 3939 ntTSL 2 BASIC7.31□□□□□ -1.24
RFX7Q2KHR2 IBTK-201ENST00000306270 6054 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
RFX7Q2KHR2 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC7.31□□□□□ -1.24
RFX7Q2KHR2 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
RFX7Q2KHR2 AL121768.1-201ENST00000613917 2544 ntBASIC7.31□□□□□ -1.24
RFX7Q2KHR2 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC7.31□□□□□ -1.24
RFX7Q2KHR2 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
RFX7Q2KHR2 LCOR-201ENST00000286067 4542 ntBASIC7.31□□□□□ -1.24
RFX7Q2KHR2 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC7.31□□□□□ -1.24
RFX7Q2KHR2 UNC13B-210ENST00000636694 8012 ntTSL 5 BASIC7.31□□□□□ -1.24
RFX7Q2KHR2 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC7.31□□□□□ -1.24
RFX7Q2KHR2 RNA5SP510-201ENST00000364697 99 ntBASIC7.31□□□□□ -1.24
RFX7Q2KHR2 AC015923.1-201ENST00000435892 305 ntTSL 2 BASIC7.31□□□□□ -1.24
RFX7Q2KHR2 VN1R110P-201ENST00000438988 971 ntBASIC7.31□□□□□ -1.24
RFX7Q2KHR2 RN7SL174P-201ENST00000475578 289 ntBASIC7.31□□□□□ -1.24
RFX7Q2KHR2 RPL23AP40-201ENST00000487630 390 ntBASIC7.31□□□□□ -1.24
RFX7Q2KHR2 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC7.31□□□□□ -1.24
RFX7Q2KHR2 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
RFX7Q2KHR2 MTATP6P1-201ENST00000514057 681 ntBASIC7.31□□□□□ -1.24
RFX7Q2KHR2 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC7.31□□□□□ -1.24
RFX7Q2KHR2 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC7.31□□□□□ -1.24
RFX7Q2KHR2 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC7.31□□□□□ -1.24
RFX7Q2KHR2 AC096708.4-201ENST00000620563 552 ntBASIC7.31□□□□□ -1.24
RFX7Q2KHR2 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC7.31□□□□□ -1.24
RFX7Q2KHR2 MIR4302-201ENST00000638058 60 ntBASIC7.31□□□□□ -1.24
RFX7Q2KHR2 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
RFX7Q2KHR2 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
RFX7Q2KHR2 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC7.31□□□□□ -1.24
RFX7Q2KHR2 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC7.3□□□□□ -1.24
RFX7Q2KHR2 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
RFX7Q2KHR2 USP9X-201ENST00000324545 12401 ntTSL 5 BASIC7.3□□□□□ -1.24
RFX7Q2KHR2 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
RFX7Q2KHR2 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
RFX7Q2KHR2 AC010329.1-201ENST00000593903 8328 ntBASIC7.3□□□□□ -1.24
RFX7Q2KHR2 AC119674.1-202ENST00000641333 1860 ntBASIC7.3□□□□□ -1.24
RFX7Q2KHR2 SLF1-201ENST00000265140 5905 ntAPPRIS P1 TSL 2 BASIC7.3□□□□□ -1.24
RFX7Q2KHR2 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
RFX7Q2KHR2 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC7.3□□□□□ -1.24
RFX7Q2KHR2 ZNF254-207ENST00000613065 4244 ntTSL 3 BASIC7.3□□□□□ -1.24
RFX7Q2KHR2 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC7.3□□□□□ -1.24
RFX7Q2KHR2 SNORA70.9-201ENST00000384370 135 ntBASIC7.3□□□□□ -1.24
RFX7Q2KHR2 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC7.3□□□□□ -1.24
RFX7Q2KHR2 MYL6P5-201ENST00000412707 459 ntBASIC7.3□□□□□ -1.24
RFX7Q2KHR2 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC7.3□□□□□ -1.24
RFX7Q2KHR2 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC7.3□□□□□ -1.24
RFX7Q2KHR2 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC7.3□□□□□ -1.24
RFX7Q2KHR2 AL445466.1-201ENST00000448432 357 ntBASIC7.3□□□□□ -1.24
RFX7Q2KHR2 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC7.3□□□□□ -1.24
RFX7Q2KHR2 AC104164.1-201ENST00000460282 590 ntBASIC7.3□□□□□ -1.24
RFX7Q2KHR2 RN7SL352P-201ENST00000466002 277 ntBASIC7.3□□□□□ -1.24
RFX7Q2KHR2 PPIAP19-201ENST00000486414 492 ntBASIC7.3□□□□□ -1.24
RFX7Q2KHR2 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC7.3□□□□□ -1.24
RFX7Q2KHR2 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC7.3□□□□□ -1.24
RFX7Q2KHR2 AC106872.4-201ENST00000510050 523 ntBASIC7.3□□□□□ -1.24
RFX7Q2KHR2 TPM3P3-201ENST00000521343 354 ntBASIC7.3□□□□□ -1.24
RFX7Q2KHR2 AC027544.3-201ENST00000535082 757 ntBASIC7.3□□□□□ -1.24
RFX7Q2KHR2 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC7.3□□□□□ -1.24
RFX7Q2KHR2 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC7.3□□□□□ -1.24
RFX7Q2KHR2 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC7.3□□□□□ -1.24
RFX7Q2KHR2 RNA5SP440-201ENST00000612665 119 ntBASIC7.3□□□□□ -1.24
RFX7Q2KHR2 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC7.3□□□□□ -1.24
RFX7Q2KHR2 UBA3-213ENST00000631029 123 ntTSL 5 BASIC7.3□□□□□ -1.24
RFX7Q2KHR2 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC7.3□□□□□ -1.24
RFX7Q2KHR2 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC7.3□□□□□ -1.24
RFX7Q2KHR2 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
RFX7Q2KHR2 CHD6-203ENST00000373233 10818 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
RFX7Q2KHR2 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
RFX7Q2KHR2 CTNNA2-202ENST00000361291 3071 ntTSL 5 BASIC7.29□□□□□ -1.24
RFX7Q2KHR2 AC004690.2-201ENST00000472838 1754 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
RFX7Q2KHR2 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
RFX7Q2KHR2 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
RFX7Q2KHR2 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC7.29□□□□□ -1.24
RFX7Q2KHR2 PAQR5-201ENST00000340965 4943 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
RFX7Q2KHR2 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
RFX7Q2KHR2 AMPD1-203ENST00000520113 2375 ntAPPRIS P3 TSL 1 (best) BASIC7.29□□□□□ -1.24
RFX7Q2KHR2 ETFBKMT-201ENST00000357721 6128 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
RFX7Q2KHR2 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
RFX7Q2KHR2 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC7.29□□□□□ -1.24
RFX7Q2KHR2 ARL6-204ENST00000463745 4231 ntAPPRIS P1 TSL 2 BASIC7.29□□□□□ -1.24
RFX7Q2KHR2 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
RFX7Q2KHR2 AL355377.1-201ENST00000621125 1653 ntBASIC7.29□□□□□ -1.24
RFX7Q2KHR2 AL357568.1-201ENST00000421530 1963 ntTSL 2 BASIC7.29□□□□□ -1.24
RFX7Q2KHR2 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
RFX7Q2KHR2 FLRT3-201ENST00000341420 3971 ntAPPRIS P1 TSL 2 BASIC7.29□□□□□ -1.24
RFX7Q2KHR2 AXDND1-201ENST00000367618 3642 ntAPPRIS P2 TSL 1 (best) BASIC7.29□□□□□ -1.24
RFX7Q2KHR2 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC7.29□□□□□ -1.24
RFX7Q2KHR2 ST8SIA5-203ENST00000538168 13761 ntTSL 2 BASIC7.29□□□□□ -1.24
RFX7Q2KHR2 OR10R3P-201ENST00000361688 942 ntBASIC7.29□□□□□ -1.24
RFX7Q2KHR2 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
RFX7Q2KHR2 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC7.29□□□□□ -1.24
RFX7Q2KHR2 RPS14P4-201ENST00000415880 418 ntBASIC7.29□□□□□ -1.24
RFX7Q2KHR2 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC7.29□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 70.1 ms