Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC5.46□□□□□ -1.54
H3F3AP84243 AL592429.1-201ENST00000403909 1473 ntBASIC5.45□□□□□ -1.54
H3F3AP84243 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
H3F3AP84243 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
H3F3AP84243 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
H3F3AP84243 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
H3F3AP84243 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
H3F3AP84243 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
H3F3AP84243 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
H3F3AP84243 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC5.45□□□□□ -1.54
H3F3AP84243 PSMA3-201ENST00000216455 970 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
H3F3AP84243 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
H3F3AP84243 RNU1-134P-201ENST00000362935 165 ntBASIC5.45□□□□□ -1.54
H3F3AP84243 CRP-204ENST00000368112 787 ntTSL 2 BASIC5.45□□□□□ -1.54
H3F3AP84243 CYP2AC1P-201ENST00000407830 1173 ntBASIC5.45□□□□□ -1.54
H3F3AP84243 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC5.45□□□□□ -1.54
H3F3AP84243 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC5.45□□□□□ -1.54
H3F3AP84243 PNKDP1-201ENST00000435914 430 ntBASIC5.45□□□□□ -1.54
H3F3AP84243 AC023141.3-201ENST00000436698 278 ntBASIC5.45□□□□□ -1.54
H3F3AP84243 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC5.45□□□□□ -1.54
H3F3AP84243 RAB28P2-201ENST00000454299 641 ntBASIC5.45□□□□□ -1.54
H3F3AP84243 AC104339.1-201ENST00000465478 348 ntBASIC5.45□□□□□ -1.54
H3F3AP84243 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC5.45□□□□□ -1.54
H3F3AP84243 AC104078.2-201ENST00000504344 541 ntTSL 5 BASIC5.45□□□□□ -1.54
H3F3AP84243 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC5.45□□□□□ -1.54
H3F3AP84243 AC084121.1-201ENST00000533882 835 ntBASIC5.45□□□□□ -1.54
H3F3AP84243 OLR1-210ENST00000544577 924 ntTSL 5 BASIC5.45□□□□□ -1.54
H3F3AP84243 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC5.45□□□□□ -1.54
H3F3AP84243 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
H3F3AP84243 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC5.45□□□□□ -1.54
H3F3AP84243 AC145285.4-201ENST00000568183 540 ntTSL 3 BASIC5.45□□□□□ -1.54
H3F3AP84243 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
H3F3AP84243 MIR4502-201ENST00000580432 81 ntBASIC5.45□□□□□ -1.54
H3F3AP84243 GLYATL1P2-202ENST00000588046 902 ntBASIC5.45□□□□□ -1.54
H3F3AP84243 AC068768.2-201ENST00000602352 343 ntBASIC5.45□□□□□ -1.54
H3F3AP84243 AL589935.1-201ENST00000602418 488 ntTSL 4 BASIC5.45□□□□□ -1.54
H3F3AP84243 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC5.45□□□□□ -1.54
H3F3AP84243 AL512652.1-201ENST00000619006 500 ntBASIC5.45□□□□□ -1.54
H3F3AP84243 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC5.45□□□□□ -1.54
H3F3AP84243 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
H3F3AP84243 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC5.45□□□□□ -1.54
H3F3AP84243 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC5.45□□□□□ -1.54
H3F3AP84243 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
H3F3AP84243 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
H3F3AP84243 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
H3F3AP84243 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
H3F3AP84243 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
H3F3AP84243 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
H3F3AP84243 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
H3F3AP84243 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
H3F3AP84243 MSL3P1-202ENST00000440028 1468 ntBASIC5.45□□□□□ -1.54
H3F3AP84243 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC5.45□□□□□ -1.54
H3F3AP84243 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
H3F3AP84243 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
H3F3AP84243 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
H3F3AP84243 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC5.44□□□□□ -1.54
H3F3AP84243 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC5.44□□□□□ -1.54
H3F3AP84243 RBMY1HP-201ENST00000382759 1389 ntBASIC5.44□□□□□ -1.54
H3F3AP84243 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
H3F3AP84243 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC5.44□□□□□ -1.54
H3F3AP84243 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC5.44□□□□□ -1.54
H3F3AP84243 AC016583.1-201ENST00000624221 2431 ntBASIC5.44□□□□□ -1.54
H3F3AP84243 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC5.44□□□□□ -1.54
H3F3AP84243 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC5.44□□□□□ -1.54
H3F3AP84243 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC5.44□□□□□ -1.54
H3F3AP84243 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC5.44□□□□□ -1.54
H3F3AP84243 TRAPPC2-203ENST00000380579 2776 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
H3F3AP84243 RNU11-201ENST00000387069 134 ntBASIC5.44□□□□□ -1.54
H3F3AP84243 AC245096.1-201ENST00000413104 546 ntBASIC5.44□□□□□ -1.54
H3F3AP84243 GAS5-202ENST00000414075 413 ntTSL 2 BASIC5.44□□□□□ -1.54
H3F3AP84243 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC5.44□□□□□ -1.54
H3F3AP84243 RPL12P12-201ENST00000424633 501 ntBASIC5.44□□□□□ -1.54
H3F3AP84243 AC021876.1-201ENST00000425959 359 ntBASIC5.44□□□□□ -1.54
H3F3AP84243 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC5.44□□□□□ -1.54
H3F3AP84243 AC016027.5-201ENST00000427227 210 ntBASIC5.44□□□□□ -1.54
H3F3AP84243 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC5.44□□□□□ -1.54
H3F3AP84243 AL445307.1-201ENST00000446476 602 ntTSL 3 BASIC5.44□□□□□ -1.54
H3F3AP84243 CTSLP6-201ENST00000458273 1002 ntBASIC5.44□□□□□ -1.54
H3F3AP84243 RN7SL352P-201ENST00000466002 277 ntBASIC5.44□□□□□ -1.54
H3F3AP84243 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC5.44□□□□□ -1.54
H3F3AP84243 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC5.44□□□□□ -1.54
H3F3AP84243 AC093815.1-201ENST00000508637 280 ntBASIC5.44□□□□□ -1.54
H3F3AP84243 RNA5SP473-201ENST00000516402 125 ntBASIC5.44□□□□□ -1.54
H3F3AP84243 IGKV3D-25-201ENST00000519599 235 ntBASIC5.44□□□□□ -1.54
H3F3AP84243 TPM3P3-201ENST00000521343 354 ntBASIC5.44□□□□□ -1.54
H3F3AP84243 OR5D2P-201ENST00000524390 911 ntBASIC5.44□□□□□ -1.54
H3F3AP84243 FAU-203ENST00000525297 355 ntTSL 5 BASIC5.44□□□□□ -1.54
H3F3AP84243 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC5.44□□□□□ -1.54
H3F3AP84243 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC5.44□□□□□ -1.54
H3F3AP84243 RERG-AS1-201ENST00000541243 337 ntTSL 2 BASIC5.44□□□□□ -1.54
H3F3AP84243 AC078864.1-201ENST00000547538 512 ntTSL 4 BASIC5.44□□□□□ -1.54
H3F3AP84243 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC5.44□□□□□ -1.54
H3F3AP84243 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC5.44□□□□□ -1.54
H3F3AP84243 AL360012.1-201ENST00000602813 131 ntBASIC5.44□□□□□ -1.54
H3F3AP84243 AL645933.2-201ENST00000606743 1207 ntBASIC5.44□□□□□ -1.54
H3F3AP84243 AC018690.1-201ENST00000608144 626 ntBASIC5.44□□□□□ -1.54
H3F3AP84243 AP001437.1-201ENST00000608783 456 ntBASIC5.44□□□□□ -1.54
H3F3AP84243 AC097641.3-201ENST00000613523 464 ntBASIC5.44□□□□□ -1.54
H3F3AP84243 RFPL4AP6-201ENST00000616792 846 ntBASIC5.44□□□□□ -1.54
H3F3AP84243 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC5.44□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 86.9 ms