Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC5.32□□□□□ -1.56
HIST1H3AP68431 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
HIST1H3AP68431 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC5.32□□□□□ -1.56
HIST1H3AP68431 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
HIST1H3AP68431 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
HIST1H3AP68431 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.31□□□□□ -1.56
HIST1H3AP68431 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
HIST1H3AP68431 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC5.31□□□□□ -1.56
HIST1H3AP68431 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
HIST1H3AP68431 CABYR-207ENST00000486759 1664 ntAPPRIS P4 TSL 5 BASIC5.31□□□□□ -1.56
HIST1H3AP68431 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
HIST1H3AP68431 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
HIST1H3AP68431 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
HIST1H3AP68431 TMEM31-201ENST00000319560 728 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
HIST1H3AP68431 RNA5SP110-201ENST00000362638 115 ntBASIC5.31□□□□□ -1.56
HIST1H3AP68431 RNA5SP375-201ENST00000362975 119 ntBASIC5.31□□□□□ -1.56
HIST1H3AP68431 RNA5SP156-201ENST00000410250 110 ntBASIC5.31□□□□□ -1.56
HIST1H3AP68431 RPL35AP31-201ENST00000418340 337 ntBASIC5.31□□□□□ -1.56
HIST1H3AP68431 RPL7AP14-201ENST00000424041 802 ntBASIC5.31□□□□□ -1.56
HIST1H3AP68431 CCNB1IP1P1-201ENST00000428976 839 ntBASIC5.31□□□□□ -1.56
HIST1H3AP68431 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC5.31□□□□□ -1.56
HIST1H3AP68431 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC5.31□□□□□ -1.56
HIST1H3AP68431 AC002553.3-201ENST00000453002 341 ntBASIC5.31□□□□□ -1.56
HIST1H3AP68431 RN7SL362P-201ENST00000494228 267 ntBASIC5.31□□□□□ -1.56
HIST1H3AP68431 RN7SL612P-201ENST00000497704 295 ntBASIC5.31□□□□□ -1.56
HIST1H3AP68431 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC5.31□□□□□ -1.56
HIST1H3AP68431 CCDC11P1-201ENST00000503137 1162 ntBASIC5.31□□□□□ -1.56
HIST1H3AP68431 CR383658.1-201ENST00000514609 734 ntBASIC5.31□□□□□ -1.56
HIST1H3AP68431 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC5.31□□□□□ -1.56
HIST1H3AP68431 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC5.31□□□□□ -1.56
HIST1H3AP68431 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC5.31□□□□□ -1.56
HIST1H3AP68431 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC5.31□□□□□ -1.56
HIST1H3AP68431 AL359232.1-202ENST00000556874 1206 ntTSL 2 BASIC5.31□□□□□ -1.56
HIST1H3AP68431 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC5.31□□□□□ -1.56
HIST1H3AP68431 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC5.31□□□□□ -1.56
HIST1H3AP68431 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC5.31□□□□□ -1.56
HIST1H3AP68431 SMIM12P1-201ENST00000603004 274 ntBASIC5.31□□□□□ -1.56
HIST1H3AP68431 AC015574.1-202ENST00000616588 456 ntTSL 5 BASIC5.31□□□□□ -1.56
HIST1H3AP68431 AC069234.4-201ENST00000621276 412 ntBASIC5.31□□□□□ -1.56
HIST1H3AP68431 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
HIST1H3AP68431 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.31□□□□□ -1.56
HIST1H3AP68431 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
HIST1H3AP68431 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
HIST1H3AP68431 AC015799.1-201ENST00000622996 3122 ntBASIC5.31□□□□□ -1.56
HIST1H3AP68431 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
HIST1H3AP68431 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC5.31□□□□□ -1.56
HIST1H3AP68431 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
HIST1H3AP68431 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
HIST1H3AP68431 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC5.31□□□□□ -1.56
HIST1H3AP68431 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC5.31□□□□□ -1.56
HIST1H3AP68431 NSF-206ENST00000575068 2667 ntTSL 2 BASIC5.3□□□□□ -1.56
HIST1H3AP68431 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
HIST1H3AP68431 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
HIST1H3AP68431 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
HIST1H3AP68431 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
HIST1H3AP68431 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
HIST1H3AP68431 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
HIST1H3AP68431 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
HIST1H3AP68431 AC008080.4-201ENST00000420185 1589 ntTSL 2 BASIC5.3□□□□□ -1.56
HIST1H3AP68431 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
HIST1H3AP68431 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
HIST1H3AP68431 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
HIST1H3AP68431 NLRP3P1-201ENST00000622303 1785 ntBASIC5.3□□□□□ -1.56
HIST1H3AP68431 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
HIST1H3AP68431 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
HIST1H3AP68431 MATR3-203ENST00000502499 2664 ntTSL 5 BASIC5.3□□□□□ -1.56
HIST1H3AP68431 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
HIST1H3AP68431 CRP-204ENST00000368112 787 ntTSL 2 BASIC5.3□□□□□ -1.56
HIST1H3AP68431 TINAG-203ENST00000370869 782 ntTSL 3 BASIC5.3□□□□□ -1.56
HIST1H3AP68431 MYL6P5-201ENST00000412707 459 ntBASIC5.3□□□□□ -1.56
HIST1H3AP68431 AC106900.1-201ENST00000418620 456 ntTSL 5 BASIC5.3□□□□□ -1.56
HIST1H3AP68431 THEM7P-201ENST00000419556 672 ntBASIC5.3□□□□□ -1.56
HIST1H3AP68431 AL445224.1-201ENST00000420595 737 ntTSL 5 BASIC5.3□□□□□ -1.56
HIST1H3AP68431 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC5.3□□□□□ -1.56
HIST1H3AP68431 AC092865.3-201ENST00000425390 1026 ntBASIC5.3□□□□□ -1.56
HIST1H3AP68431 AC130360.1-201ENST00000425489 1117 ntBASIC5.3□□□□□ -1.56
HIST1H3AP68431 AC024601.1-201ENST00000427247 524 ntTSL 3 BASIC5.3□□□□□ -1.56
HIST1H3AP68431 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
HIST1H3AP68431 CUBNP2-201ENST00000443534 1139 ntBASIC5.3□□□□□ -1.56
HIST1H3AP68431 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC5.3□□□□□ -1.56
HIST1H3AP68431 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC5.3□□□□□ -1.56
HIST1H3AP68431 SH2D1A-203ENST00000477673 461 ntTSL 2 BASIC5.3□□□□□ -1.56
HIST1H3AP68431 AC098818.1-201ENST00000478593 252 ntBASIC5.3□□□□□ -1.56
HIST1H3AP68431 RPS27P20-201ENST00000492051 246 ntBASIC5.3□□□□□ -1.56
HIST1H3AP68431 AC106822.1-201ENST00000502647 526 ntBASIC5.3□□□□□ -1.56
HIST1H3AP68431 HMGN1P17-201ENST00000513734 295 ntBASIC5.3□□□□□ -1.56
HIST1H3AP68431 AC130365.2-201ENST00000525882 1201 ntBASIC5.3□□□□□ -1.56
HIST1H3AP68431 NPIPB14P-203ENST00000532298 987 ntBASIC5.3□□□□□ -1.56
HIST1H3AP68431 ANP32E-205ENST00000533654 908 ntTSL 2 BASIC5.3□□□□□ -1.56
HIST1H3AP68431 AC084880.3-201ENST00000535921 541 ntTSL 4 BASIC5.3□□□□□ -1.56
HIST1H3AP68431 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC5.3□□□□□ -1.56
HIST1H3AP68431 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC5.3□□□□□ -1.56
HIST1H3AP68431 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC5.3□□□□□ -1.56
HIST1H3AP68431 AL078601.3-201ENST00000573303 535 ntBASIC5.3□□□□□ -1.56
HIST1H3AP68431 STARD6-202ENST00000577499 696 ntTSL 2 BASIC5.3□□□□□ -1.56
HIST1H3AP68431 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC5.3□□□□□ -1.56
HIST1H3AP68431 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC5.3□□□□□ -1.56
HIST1H3AP68431 AC073389.3-201ENST00000609434 935 ntBASIC5.3□□□□□ -1.56
HIST1H3AP68431 AL357562.1-201ENST00000624911 609 ntBASIC5.3□□□□□ -1.56
HIST1H3AP68431 MVP-219ENST00000629059 120 ntTSL 5 BASIC5.3□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 69.5 ms