Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
CLDN20P56880 HNRNPA1P18-201ENST00000433537 927 ntBASIC5.75□□□□□ -1.49
CLDN20P56880 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC5.75□□□□□ -1.49
CLDN20P56880 REG1CP-206ENST00000447469 496 ntBASIC5.75□□□□□ -1.49
CLDN20P56880 EEF1B2P3-201ENST00000447718 678 ntBASIC5.75□□□□□ -1.49
CLDN20P56880 XXYLT1-AS2-202ENST00000447975 784 ntTSL 2 BASIC5.75□□□□□ -1.49
CLDN20P56880 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC5.75□□□□□ -1.49
CLDN20P56880 RN7SL552P-201ENST00000462094 276 ntBASIC5.75□□□□□ -1.49
CLDN20P56880 TRBV8-1-201ENST00000481590 279 ntBASIC5.75□□□□□ -1.49
CLDN20P56880 RWDD4P1-201ENST00000488019 565 ntBASIC5.75□□□□□ -1.49
CLDN20P56880 AC090058.1-201ENST00000498788 435 ntBASIC5.75□□□□□ -1.49
CLDN20P56880 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC5.75□□□□□ -1.49
CLDN20P56880 C5orf64-204ENST00000507461 535 ntTSL 4 BASIC5.75□□□□□ -1.49
CLDN20P56880 RNA5SP206-201ENST00000516703 121 ntBASIC5.75□□□□□ -1.49
CLDN20P56880 ODF1-202ENST00000518835 368 ntTSL 3 BASIC5.75□□□□□ -1.49
CLDN20P56880 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC5.75□□□□□ -1.49
CLDN20P56880 AC069208.1-201ENST00000540811 676 ntTSL 4 BASIC5.75□□□□□ -1.49
CLDN20P56880 OLR1-209ENST00000543993 822 ntTSL 2 BASIC5.75□□□□□ -1.49
CLDN20P56880 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC5.75□□□□□ -1.49
CLDN20P56880 AC010326.3-201ENST00000597780 679 ntTSL 5 BASIC5.75□□□□□ -1.49
CLDN20P56880 AC093388.1-201ENST00000609166 430 ntBASIC5.75□□□□□ -1.49
CLDN20P56880 AL359091.2-201ENST00000609303 556 ntBASIC5.75□□□□□ -1.49
CLDN20P56880 AC073575.2-201ENST00000614212 627 ntBASIC5.75□□□□□ -1.49
CLDN20P56880 AC015574.1-202ENST00000616588 456 ntTSL 5 BASIC5.75□□□□□ -1.49
CLDN20P56880 AL109620.1-201ENST00000618738 1197 ntBASIC5.75□□□□□ -1.49
CLDN20P56880 AC020923.1-201ENST00000624021 917 ntBASIC5.75□□□□□ -1.49
CLDN20P56880 AL132640.3-201ENST00000630473 177 ntBASIC5.75□□□□□ -1.49
CLDN20P56880 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC5.75□□□□□ -1.49
CLDN20P56880 SH3BGRL-201ENST00000373212 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CLDN20P56880 MATR3-215ENST00000510056 3040 ntTSL 5 BASIC5.75□□□□□ -1.49
CLDN20P56880 ZNF214-204ENST00000536068 2562 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CLDN20P56880 AC025470.1-201ENST00000510053 2032 ntBASIC5.75□□□□□ -1.49
CLDN20P56880 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC5.75□□□□□ -1.49
CLDN20P56880 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC5.75□□□□□ -1.49
CLDN20P56880 ACPP-202ENST00000351273 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
CLDN20P56880 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
CLDN20P56880 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC5.75□□□□□ -1.49
CLDN20P56880 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
CLDN20P56880 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC5.75□□□□□ -1.49
CLDN20P56880 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC5.75□□□□□ -1.49
CLDN20P56880 AC125238.2-201ENST00000430003 1440 ntBASIC5.74□□□□□ -1.49
CLDN20P56880 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
CLDN20P56880 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CLDN20P56880 AC083837.1-201ENST00000565297 2994 ntBASIC5.74□□□□□ -1.49
CLDN20P56880 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CLDN20P56880 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC5.74□□□□□ -1.49
CLDN20P56880 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
CLDN20P56880 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC5.74□□□□□ -1.49
CLDN20P56880 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CLDN20P56880 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
CLDN20P56880 AC232271.1-201ENST00000602455 2715 ntBASIC5.74□□□□□ -1.49
CLDN20P56880 CYLD-210ENST00000566206 3104 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CLDN20P56880 RNA5SP232-201ENST00000364144 119 ntBASIC5.74□□□□□ -1.49
CLDN20P56880 AL157702.1-201ENST00000398764 426 ntBASIC5.74□□□□□ -1.49
CLDN20P56880 RN7SKP86-201ENST00000410454 332 ntBASIC5.74□□□□□ -1.49
CLDN20P56880 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC5.74□□□□□ -1.49
CLDN20P56880 AL161793.1-201ENST00000435021 445 ntTSL 3 BASIC5.74□□□□□ -1.49
CLDN20P56880 EMC3-AS1-205ENST00000438698 534 ntBASIC5.74□□□□□ -1.49
CLDN20P56880 CXCR2P1-202ENST00000443392 1074 ntBASIC5.74□□□□□ -1.49
CLDN20P56880 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC5.74□□□□□ -1.49
CLDN20P56880 CCNJP2-201ENST00000457810 1163 ntBASIC5.74□□□□□ -1.49
CLDN20P56880 OR7E22P-201ENST00000478335 1035 ntBASIC5.74□□□□□ -1.49
CLDN20P56880 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC5.74□□□□□ -1.49
CLDN20P56880 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC5.74□□□□□ -1.49
CLDN20P56880 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC5.74□□□□□ -1.49
CLDN20P56880 AC113367.2-201ENST00000505749 160 ntBASIC5.74□□□□□ -1.49
CLDN20P56880 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC5.74□□□□□ -1.49
CLDN20P56880 AC131182.1-201ENST00000509184 657 ntTSL 3 BASIC5.74□□□□□ -1.49
CLDN20P56880 AC093599.1-201ENST00000515232 562 ntTSL 4 BASIC5.74□□□□□ -1.49
CLDN20P56880 RNU6-943P-201ENST00000516960 98 ntBASIC5.74□□□□□ -1.49
CLDN20P56880 LACTB2-AS1-203ENST00000518553 817 ntTSL 5 BASIC5.74□□□□□ -1.49
CLDN20P56880 AC026688.1-201ENST00000520639 1168 ntBASIC5.74□□□□□ -1.49
CLDN20P56880 AC027117.1-201ENST00000520646 667 ntTSL 5 BASIC5.74□□□□□ -1.49
CLDN20P56880 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC5.74□□□□□ -1.49
CLDN20P56880 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC5.74□□□□□ -1.49
CLDN20P56880 MAGOHB-204ENST00000539554 666 ntTSL 3 BASIC5.74□□□□□ -1.49
CLDN20P56880 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC5.74□□□□□ -1.49
CLDN20P56880 DCN-209ENST00000546745 1026 ntTSL 3 BASIC5.74□□□□□ -1.49
CLDN20P56880 AL132989.1-201ENST00000557322 576 ntTSL 3 BASIC5.74□□□□□ -1.49
CLDN20P56880 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC5.74□□□□□ -1.49
CLDN20P56880 AL731537.2-201ENST00000561565 951 ntBASIC5.74□□□□□ -1.49
CLDN20P56880 AC005632.2-201ENST00000564271 828 ntBASIC5.74□□□□□ -1.49
CLDN20P56880 RN7SL230P-201ENST00000580835 303 ntBASIC5.74□□□□□ -1.49
CLDN20P56880 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC5.74□□□□□ -1.49
CLDN20P56880 AC020915.3-201ENST00000595301 550 ntTSL 5 BASIC5.74□□□□□ -1.49
CLDN20P56880 AC024589.2-201ENST00000605642 1294 ntBASIC5.74□□□□□ -1.49
CLDN20P56880 OSTC-205ENST00000613215 876 ntTSL 2 BASIC5.74□□□□□ -1.49
CLDN20P56880 AC104307.1-201ENST00000616142 196 ntBASIC5.74□□□□□ -1.49
CLDN20P56880 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC5.74□□□□□ -1.49
CLDN20P56880 DYNC2LI1-201ENST00000260605 1399 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
CLDN20P56880 NLRP3P1-201ENST00000622303 1785 ntBASIC5.74□□□□□ -1.49
CLDN20P56880 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
CLDN20P56880 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC5.74□□□□□ -1.49
CLDN20P56880 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
CLDN20P56880 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CLDN20P56880 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC5.74□□□□□ -1.49
CLDN20P56880 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CLDN20P56880 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CLDN20P56880 AC087516.1-201ENST00000561236 2428 ntBASIC5.74□□□□□ -1.49
CLDN20P56880 LINC01931-201ENST00000295052 1832 ntTSL 2 BASIC5.74□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 64.8 ms