Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 AC018845.1-201ENST00000564193 744 ntTSL 2 BASIC5.99□□□□□ -1.45
CDH13P55290 OOSP1P2-201ENST00000579644 351 ntBASIC5.99□□□□□ -1.45
CDH13P55290 MIR212-201ENST00000586026 110 ntBASIC5.99□□□□□ -1.45
CDH13P55290 AC012593.1-208ENST00000587791 696 ntTSL 5 BASIC5.99□□□□□ -1.45
CDH13P55290 AC009303.3-201ENST00000591103 736 ntBASIC5.99□□□□□ -1.45
CDH13P55290 BNIP3P7-201ENST00000605641 516 ntBASIC5.99□□□□□ -1.45
CDH13P55290 AC007100.1-201ENST00000606382 478 ntTSL 5 BASIC5.99□□□□□ -1.45
CDH13P55290 AC079298.3-201ENST00000624941 977 ntTSL 3 BASIC5.99□□□□□ -1.45
CDH13P55290 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC5.99□□□□□ -1.45
CDH13P55290 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC5.99□□□□□ -1.45
CDH13P55290 AP000432.2-201ENST00000624164 2048 ntBASIC5.99□□□□□ -1.45
CDH13P55290 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
CDH13P55290 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
CDH13P55290 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC5.99□□□□□ -1.45
CDH13P55290 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
CDH13P55290 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
CDH13P55290 STK3-216ENST00000523601 3107 ntTSL 2 BASIC5.99□□□□□ -1.45
CDH13P55290 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
CDH13P55290 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC5.98□□□□□ -1.45
CDH13P55290 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
CDH13P55290 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC5.98□□□□□ -1.45
CDH13P55290 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
CDH13P55290 AL035665.1-201ENST00000428495 1669 ntTSL 3 BASIC5.98□□□□□ -1.45
CDH13P55290 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
CDH13P55290 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC5.98□□□□□ -1.45
CDH13P55290 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
CDH13P55290 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
CDH13P55290 AC217777.1-201ENST00000570034 1471 ntBASIC5.98□□□□□ -1.45
CDH13P55290 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
CDH13P55290 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
CDH13P55290 OFD1P15Y-201ENST00000411536 1392 ntBASIC5.98□□□□□ -1.45
CDH13P55290 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
CDH13P55290 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
CDH13P55290 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC5.98□□□□□ -1.45
CDH13P55290 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC5.98□□□□□ -1.45
CDH13P55290 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC5.98□□□□□ -1.45
CDH13P55290 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
CDH13P55290 RPL11P4-201ENST00000332269 436 ntBASIC5.98□□□□□ -1.45
CDH13P55290 RNA5SP346-201ENST00000363541 121 ntBASIC5.98□□□□□ -1.45
CDH13P55290 RNA5SP77-201ENST00000365394 120 ntBASIC5.98□□□□□ -1.45
CDH13P55290 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
CDH13P55290 MTND2P12-201ENST00000417560 1252 ntBASIC5.98□□□□□ -1.45
CDH13P55290 AC092651.1-201ENST00000426110 312 ntBASIC5.98□□□□□ -1.45
CDH13P55290 AL365220.1-201ENST00000432923 399 ntBASIC5.98□□□□□ -1.45
CDH13P55290 AL136460.1-201ENST00000442389 473 ntTSL 3 BASIC5.98□□□□□ -1.45
CDH13P55290 AC073072.2-201ENST00000447425 348 ntBASIC5.98□□□□□ -1.45
CDH13P55290 MRPS33-203ENST00000467334 622 ntTSL 2 BASIC5.98□□□□□ -1.45
CDH13P55290 PFN2-209ENST00000481275 560 ntTSL 4 BASIC5.98□□□□□ -1.45
CDH13P55290 RN7SL502P-201ENST00000481857 290 ntBASIC5.98□□□□□ -1.45
CDH13P55290 AC117386.2-203ENST00000489690 557 ntTSL 3 BASIC5.98□□□□□ -1.45
CDH13P55290 EIF4E2P2-201ENST00000492033 736 ntBASIC5.98□□□□□ -1.45
CDH13P55290 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC5.98□□□□□ -1.45
CDH13P55290 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC5.98□□□□□ -1.45
CDH13P55290 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC5.98□□□□□ -1.45
CDH13P55290 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
CDH13P55290 MEG8-217ENST00000556637 924 ntTSL 5 BASIC5.98□□□□□ -1.45
CDH13P55290 AC093524.1-201ENST00000564266 1094 ntBASIC5.98□□□□□ -1.45
CDH13P55290 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC5.98□□□□□ -1.45
CDH13P55290 AC025283.1-201ENST00000572039 734 ntBASIC5.98□□□□□ -1.45
CDH13P55290 AC063977.7-201ENST00000594454 337 ntBASIC5.98□□□□□ -1.45
CDH13P55290 SNORA74.4-201ENST00000607595 199 ntBASIC5.98□□□□□ -1.45
CDH13P55290 U91328.4-201ENST00000608919 517 ntBASIC5.98□□□□□ -1.45
CDH13P55290 RN7SL261P-201ENST00000613441 282 ntBASIC5.98□□□□□ -1.45
CDH13P55290 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC5.98□□□□□ -1.45
CDH13P55290 AL391597.1-201ENST00000618707 694 ntBASIC5.98□□□□□ -1.45
CDH13P55290 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC5.98□□□□□ -1.45
CDH13P55290 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC5.98□□□□□ -1.45
CDH13P55290 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
CDH13P55290 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
CDH13P55290 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC5.98□□□□□ -1.45
CDH13P55290 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC5.98□□□□□ -1.45
CDH13P55290 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC5.98□□□□□ -1.45
CDH13P55290 NSF-206ENST00000575068 2667 ntTSL 2 BASIC5.98□□□□□ -1.45
CDH13P55290 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
CDH13P55290 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
CDH13P55290 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
CDH13P55290 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC5.97□□□□□ -1.45
CDH13P55290 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
CDH13P55290 MSL3P1-202ENST00000440028 1468 ntBASIC5.97□□□□□ -1.45
CDH13P55290 AC114876.1-201ENST00000490962 1366 ntBASIC5.97□□□□□ -1.45
CDH13P55290 AC011346.1-201ENST00000638059 1359 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
CDH13P55290 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
CDH13P55290 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
CDH13P55290 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
CDH13P55290 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
CDH13P55290 OR5B21-201ENST00000360374 931 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
CDH13P55290 ST3GAL3-212ENST00000372362 468 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
CDH13P55290 TRGV3-201ENST00000390346 537 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
CDH13P55290 YWHAZP4-201ENST00000392459 708 ntBASIC5.97□□□□□ -1.45
CDH13P55290 NPM1P38-201ENST00000403835 865 ntBASIC5.97□□□□□ -1.45
CDH13P55290 AL096800.1-201ENST00000405326 893 ntBASIC5.97□□□□□ -1.45
CDH13P55290 XIST-201ENST00000416330 750 ntTSL 2 BASIC5.97□□□□□ -1.45
CDH13P55290 AL360013.1-201ENST00000419031 858 ntBASIC5.97□□□□□ -1.45
CDH13P55290 RPL12P43-201ENST00000420608 499 ntBASIC5.97□□□□□ -1.45
CDH13P55290 AK3P5-201ENST00000432033 519 ntBASIC5.97□□□□□ -1.45
CDH13P55290 IGLV3-4-201ENST00000432300 244 ntBASIC5.97□□□□□ -1.45
CDH13P55290 AC016582.1-203ENST00000433142 502 ntTSL 3 BASIC5.97□□□□□ -1.45
CDH13P55290 AC092601.1-201ENST00000444526 383 ntBASIC5.97□□□□□ -1.45
CDH13P55290 POU5F1P5-201ENST00000445059 658 ntBASIC5.97□□□□□ -1.45
CDH13P55290 AC147651.1-201ENST00000453149 572 ntTSL 2 BASIC5.97□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms