Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC5.7□□□□□ -1.5
CDH11P55287 AC022872.1-201ENST00000568391 781 ntTSL 2 BASIC5.7□□□□□ -1.5
CDH11P55287 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC5.7□□□□□ -1.5
CDH11P55287 AP000919.1-201ENST00000582850 985 ntBASIC5.7□□□□□ -1.5
CDH11P55287 LINC01841-201ENST00000586698 573 ntTSL 4 BASIC5.7□□□□□ -1.5
CDH11P55287 TTN-AS1-226ENST00000588716 604 ntTSL 5 BASIC5.7□□□□□ -1.5
CDH11P55287 AC003991.1-201ENST00000594469 484 ntTSL 5 BASIC5.7□□□□□ -1.5
CDH11P55287 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC5.7□□□□□ -1.5
CDH11P55287 AC097467.3-216ENST00000599555 1293 ntTSL 5 BASIC5.7□□□□□ -1.5
CDH11P55287 AL138960.1-201ENST00000613838 513 ntBASIC5.7□□□□□ -1.5
CDH11P55287 5S_rRNA.29-201ENST00000641250 107 ntBASIC5.7□□□□□ -1.5
CDH11P55287 OR56A4-203ENST00000641279 1209 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
CDH11P55287 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CDH11P55287 NAT2-201ENST00000286479 1322 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CDH11P55287 CCNT2P1-201ENST00000423082 1315 ntBASIC5.7□□□□□ -1.5
CDH11P55287 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CDH11P55287 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
CDH11P55287 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
CDH11P55287 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CDH11P55287 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC5.69□□□□□ -1.5
CDH11P55287 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC5.69□□□□□ -1.5
CDH11P55287 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CDH11P55287 AC092724.1-201ENST00000624623 3397 ntBASIC5.69□□□□□ -1.5
CDH11P55287 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC5.69□□□□□ -1.5
CDH11P55287 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC5.69□□□□□ -1.5
CDH11P55287 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
CDH11P55287 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC5.69□□□□□ -1.5
CDH11P55287 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
CDH11P55287 AL442071.1-201ENST00000289890 558 ntTSL 3 BASIC5.69□□□□□ -1.5
CDH11P55287 TINAG-203ENST00000370869 782 ntTSL 3 BASIC5.69□□□□□ -1.5
CDH11P55287 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC5.69□□□□□ -1.5
CDH11P55287 SULT1C2-204ENST00000409880 1206 ntTSL 3 BASIC5.69□□□□□ -1.5
CDH11P55287 RN7SKP151-201ENST00000410230 316 ntBASIC5.69□□□□□ -1.5
CDH11P55287 RN7SKP86-201ENST00000410454 332 ntBASIC5.69□□□□□ -1.5
CDH11P55287 PVALB-204ENST00000417718 569 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CDH11P55287 LINC01363-202ENST00000428030 930 ntTSL 3 BASIC5.69□□□□□ -1.5
CDH11P55287 PRH1-201ENST00000428168 603 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
CDH11P55287 NPM1P48-201ENST00000436002 853 ntBASIC5.69□□□□□ -1.5
CDH11P55287 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC5.69□□□□□ -1.5
CDH11P55287 AL139220.2-214ENST00000437643 614 ntTSL 3 BASIC5.69□□□□□ -1.5
CDH11P55287 VPS25P1-201ENST00000455691 508 ntBASIC5.69□□□□□ -1.5
CDH11P55287 AC245088.1-201ENST00000486508 384 ntTSL 3 BASIC5.69□□□□□ -1.5
CDH11P55287 RPL24-206ENST00000495401 478 ntTSL 2 BASIC5.69□□□□□ -1.5
CDH11P55287 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC5.69□□□□□ -1.5
CDH11P55287 AC007207.2-201ENST00000543206 542 ntTSL 3 BASIC5.69□□□□□ -1.5
CDH11P55287 OLR1-209ENST00000543993 822 ntTSL 2 BASIC5.69□□□□□ -1.5
CDH11P55287 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC5.69□□□□□ -1.5
CDH11P55287 AC135626.1-201ENST00000556983 435 ntBASIC5.69□□□□□ -1.5
CDH11P55287 SEPT4-AS1-202ENST00000580589 653 ntTSL 3 BASIC5.69□□□□□ -1.5
CDH11P55287 MIR4271-201ENST00000582451 67 ntBASIC5.69□□□□□ -1.5
CDH11P55287 AC009303.3-201ENST00000591103 736 ntBASIC5.69□□□□□ -1.5
CDH11P55287 AC063977.7-201ENST00000594454 337 ntBASIC5.69□□□□□ -1.5
CDH11P55287 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC5.69□□□□□ -1.5
CDH11P55287 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC5.69□□□□□ -1.5
CDH11P55287 AP000654.1-201ENST00000602510 1192 ntTSL 5 BASIC5.69□□□□□ -1.5
CDH11P55287 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC5.69□□□□□ -1.5
CDH11P55287 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC5.69□□□□□ -1.5
CDH11P55287 SMR3B-204ENST00000614072 783 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CDH11P55287 MIR6085-201ENST00000618314 110 ntBASIC5.69□□□□□ -1.5
CDH11P55287 AC010325.3-201ENST00000641084 394 ntBASIC5.69□□□□□ -1.5
CDH11P55287 AC096921.2-201ENST00000561507 1916 ntBASIC5.69□□□□□ -1.5
CDH11P55287 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.69□□□□□ -1.5
CDH11P55287 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC5.69□□□□□ -1.5
CDH11P55287 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
CDH11P55287 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC5.69□□□□□ -1.5
CDH11P55287 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC5.69□□□□□ -1.5
CDH11P55287 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
CDH11P55287 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC5.69□□□□□ -1.5
CDH11P55287 GIF-201ENST00000257248 1518 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CDH11P55287 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CDH11P55287 DYNC2LI1-201ENST00000260605 1399 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
CDH11P55287 MTCO1P22-201ENST00000604619 1360 ntBASIC5.68□□□□□ -1.5
CDH11P55287 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
CDH11P55287 DCN-218ENST00000551354 2924 ntTSL 3 BASIC5.68□□□□□ -1.5
CDH11P55287 ENTPD1-AS1-212ENST00000458228 3274 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CDH11P55287 CXCL8-201ENST00000307407 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.68□□□□□ -1.5
CDH11P55287 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
CDH11P55287 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
CDH11P55287 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CDH11P55287 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CDH11P55287 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CDH11P55287 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC5.68□□□□□ -1.5
CDH11P55287 AL121768.1-201ENST00000613917 2544 ntBASIC5.68□□□□□ -1.5
CDH11P55287 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
CDH11P55287 RNU1-65P-201ENST00000363919 148 ntBASIC5.68□□□□□ -1.5
CDH11P55287 RN7SKP186-201ENST00000365371 303 ntBASIC5.68□□□□□ -1.5
CDH11P55287 AC015977.1-201ENST00000418887 292 ntBASIC5.68□□□□□ -1.5
CDH11P55287 BTBD7P2-201ENST00000441962 620 ntBASIC5.68□□□□□ -1.5
CDH11P55287 AL020997.1-201ENST00000446554 349 ntBASIC5.68□□□□□ -1.5
CDH11P55287 AC136489.1-203ENST00000450246 736 ntTSL 5 BASIC5.68□□□□□ -1.5
CDH11P55287 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC5.68□□□□□ -1.5
CDH11P55287 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC5.68□□□□□ -1.5
CDH11P55287 H3F3AP5-201ENST00000475267 429 ntBASIC5.68□□□□□ -1.5
CDH11P55287 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC5.68□□□□□ -1.5
CDH11P55287 OR7E22P-201ENST00000478335 1035 ntBASIC5.68□□□□□ -1.5
CDH11P55287 CR383656.1-201ENST00000484916 377 ntBASIC5.68□□□□□ -1.5
CDH11P55287 AL035690.1-201ENST00000490892 383 ntBASIC5.68□□□□□ -1.5
CDH11P55287 SNX24-205ENST00000506996 588 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CDH11P55287 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC5.68□□□□□ -1.5
CDH11P55287 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC5.68□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 93.6 ms