Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 LINC01919-201ENST00000578610 568 ntTSL 5 BASIC7.52□□□□□ -1.21
MRE11P49959 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC7.52□□□□□ -1.21
MRE11P49959 ZNF675-204ENST00000599168 592 ntTSL 2 BASIC7.52□□□□□ -1.21
MRE11P49959 WBP1LP12-201ENST00000604449 331 ntBASIC7.52□□□□□ -1.21
MRE11P49959 AL035410.2-201ENST00000604963 864 ntBASIC7.52□□□□□ -1.21
MRE11P49959 AC084824.5-201ENST00000612009 413 ntBASIC7.52□□□□□ -1.21
MRE11P49959 AC004241.2-201ENST00000614562 444 ntBASIC7.52□□□□□ -1.21
MRE11P49959 AC078909.2-201ENST00000620584 398 ntBASIC7.52□□□□□ -1.21
MRE11P49959 AP001043.1-201ENST00000626259 773 ntTSL 5 BASIC7.52□□□□□ -1.21
MRE11P49959 OR6C71P-202ENST00000641886 1107 ntBASIC7.52□□□□□ -1.21
MRE11P49959 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
MRE11P49959 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
MRE11P49959 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC7.52□□□□□ -1.21
MRE11P49959 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC7.52□□□□□ -1.21
MRE11P49959 GPR155-206ENST00000614352 7321 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
MRE11P49959 TDRD1-201ENST00000251864 4510 ntAPPRIS P2 TSL 1 (best) BASIC7.52□□□□□ -1.21
MRE11P49959 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC7.52□□□□□ -1.21
MRE11P49959 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC7.52□□□□□ -1.21
MRE11P49959 ZNF214-204ENST00000536068 2562 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
MRE11P49959 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
MRE11P49959 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC7.52□□□□□ -1.21
MRE11P49959 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
MRE11P49959 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
MRE11P49959 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC7.51□□□□□ -1.21
MRE11P49959 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
MRE11P49959 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
MRE11P49959 SLC25A30-204ENST00000519676 3670 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
MRE11P49959 AL512283.1-201ENST00000606756 1384 ntBASIC7.51□□□□□ -1.21
MRE11P49959 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC7.51□□□□□ -1.21
MRE11P49959 PAIP1-202ENST00000338972 1814 ntAPPRIS P3 TSL 5 BASIC7.51□□□□□ -1.21
MRE11P49959 RNA5SP114-201ENST00000363780 113 ntBASIC7.51□□□□□ -1.21
MRE11P49959 RSL24D1P1-201ENST00000404972 493 ntBASIC7.51□□□□□ -1.21
MRE11P49959 AL049697.3-201ENST00000406493 982 ntBASIC7.51□□□□□ -1.21
MRE11P49959 AL445465.1-208ENST00000419709 506 ntTSL 3 BASIC7.51□□□□□ -1.21
MRE11P49959 AL158070.1-201ENST00000421614 631 ntTSL 2 BASIC7.51□□□□□ -1.21
MRE11P49959 RNASE9-203ENST00000429244 1084 ntAPPRIS P3 TSL 1 (best) BASIC7.51□□□□□ -1.21
MRE11P49959 GK-IT1-201ENST00000441146 397 ntTSL 5 BASIC7.51□□□□□ -1.21
MRE11P49959 AL022237.1-201ENST00000446663 358 ntBASIC7.51□□□□□ -1.21
MRE11P49959 AC010878.1-201ENST00000456500 1047 ntBASIC7.51□□□□□ -1.21
MRE11P49959 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC7.51□□□□□ -1.21
MRE11P49959 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC7.51□□□□□ -1.21
MRE11P49959 RN7SL83P-201ENST00000468131 297 ntBASIC7.51□□□□□ -1.21
MRE11P49959 RPS4XP14-201ENST00000493072 781 ntBASIC7.51□□□□□ -1.21
MRE11P49959 PFN2-213ENST00000494827 793 ntTSL 4 BASIC7.51□□□□□ -1.21
MRE11P49959 AC112206.2-201ENST00000503106 557 ntTSL 4 BASIC7.51□□□□□ -1.21
MRE11P49959 AC104825.1-201ENST00000503186 685 ntTSL 3 BASIC7.51□□□□□ -1.21
MRE11P49959 AC106872.4-201ENST00000510050 523 ntBASIC7.51□□□□□ -1.21
MRE11P49959 AC093535.1-203ENST00000512500 730 ntTSL 3 BASIC7.51□□□□□ -1.21
MRE11P49959 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC7.51□□□□□ -1.21
MRE11P49959 H2AFV-208ENST00000521529 439 ntTSL 5 BASIC7.51□□□□□ -1.21
MRE11P49959 IGLVV-66-201ENST00000523818 341 ntBASIC7.51□□□□□ -1.21
MRE11P49959 AP003049.1-201ENST00000529418 457 ntBASIC7.51□□□□□ -1.21
MRE11P49959 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC7.51□□□□□ -1.21
MRE11P49959 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC7.51□□□□□ -1.21
MRE11P49959 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC7.51□□□□□ -1.21
MRE11P49959 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC7.51□□□□□ -1.21
MRE11P49959 AL162511.1-201ENST00000556542 879 ntTSL 4 BASIC7.51□□□□□ -1.21
MRE11P49959 AL359232.1-202ENST00000556874 1206 ntTSL 2 BASIC7.51□□□□□ -1.21
MRE11P49959 CAPN3-210ENST00000561817 915 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
MRE11P49959 OR4H6P-201ENST00000563771 921 ntBASIC7.51□□□□□ -1.21
MRE11P49959 AC099511.1-201ENST00000564561 590 ntTSL 2 BASIC7.51□□□□□ -1.21
MRE11P49959 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC7.51□□□□□ -1.21
MRE11P49959 AC090227.1-201ENST00000590532 936 ntAPPRIS P1 TSL 5 BASIC7.51□□□□□ -1.21
MRE11P49959 AC020914.7-201ENST00000594477 545 ntBASIC7.51□□□□□ -1.21
MRE11P49959 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC7.51□□□□□ -1.21
MRE11P49959 AL445649.1-201ENST00000615941 691 ntBASIC7.51□□□□□ -1.21
MRE11P49959 AP005212.3-201ENST00000619964 528 ntBASIC7.51□□□□□ -1.21
MRE11P49959 AC244517.6-202ENST00000623884 566 ntAPPRIS P1 TSL 4 BASIC7.51□□□□□ -1.21
MRE11P49959 METTL15-211ENST00000634762 718 ntTSL 5 BASIC7.51□□□□□ -1.21
MRE11P49959 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC7.51□□□□□ -1.21
MRE11P49959 5S_rRNA.29-201ENST00000641250 107 ntBASIC7.51□□□□□ -1.21
MRE11P49959 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC7.51□□□□□ -1.21
MRE11P49959 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC7.51□□□□□ -1.21
MRE11P49959 AC079753.1-201ENST00000623243 3868 ntBASIC7.51□□□□□ -1.21
MRE11P49959 AC068446.1-201ENST00000556425 1549 ntBASIC7.51□□□□□ -1.21
MRE11P49959 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC7.51□□□□□ -1.21
MRE11P49959 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC7.51□□□□□ -1.21
MRE11P49959 AC010894.3-202ENST00000412835 1405 ntTSL 2 BASIC7.51□□□□□ -1.21
MRE11P49959 GPATCH2L-201ENST00000261530 14007 ntTSL 2 BASIC7.51□□□□□ -1.21
MRE11P49959 CNIH1-201ENST00000216416 4793 ntAPPRIS P2 TSL 1 (best) BASIC7.51□□□□□ -1.21
MRE11P49959 SAMD3-203ENST00000437477 2028 ntAPPRIS P1 TSL 5 BASIC7.51□□□□□ -1.21
MRE11P49959 ADAL-201ENST00000389651 1559 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
MRE11P49959 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC7.5□□□□□ -1.21
MRE11P49959 GTF2H3-201ENST00000228955 1472 ntTSL 2 BASIC7.5□□□□□ -1.21
MRE11P49959 BBOX1-205ENST00000529202 1725 ntAPPRIS P1 TSL 5 BASIC7.5□□□□□ -1.21
MRE11P49959 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC7.5□□□□□ -1.21
MRE11P49959 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
MRE11P49959 CDY19P-201ENST00000411668 1613 ntBASIC7.5□□□□□ -1.21
MRE11P49959 HOXD8-202ENST00000429017 1608 ntTSL 2 BASIC7.5□□□□□ -1.21
MRE11P49959 CDY18P-201ENST00000438294 1609 ntBASIC7.5□□□□□ -1.21
MRE11P49959 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC7.5□□□□□ -1.21
MRE11P49959 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC7.5□□□□□ -1.21
MRE11P49959 LACRT-201ENST00000257867 551 ntAPPRIS P2 TSL 1 (best) BASIC7.5□□□□□ -1.21
MRE11P49959 RNA5SP443-201ENST00000363083 132 ntBASIC7.5□□□□□ -1.21
MRE11P49959 SNORA70.3-201ENST00000365075 132 ntBASIC7.5□□□□□ -1.21
MRE11P49959 AL353133.1-201ENST00000407695 401 ntBASIC7.5□□□□□ -1.21
MRE11P49959 AL663061.1-201ENST00000416625 580 ntBASIC7.5□□□□□ -1.21
MRE11P49959 RPL18AP14-201ENST00000417685 526 ntBASIC7.5□□□□□ -1.21
MRE11P49959 CYCSP52-201ENST00000422857 310 ntBASIC7.5□□□□□ -1.21
MRE11P49959 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC7.5□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms