Protein–RNA interactions for Protein: P49662

CASP4, Caspase-4, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4P49662 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC6.55□□□□□ -1.36
CASP4P49662 MAGEB16-204ENST00000399989 1818 ntAPPRIS P2 TSL 5 BASIC6.55□□□□□ -1.36
CASP4P49662 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
CASP4P49662 FGF13-201ENST00000305414 1939 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
CASP4P49662 USP40-202ENST00000409945 1946 ntTSL 2 BASIC6.54□□□□□ -1.36
CASP4P49662 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC6.54□□□□□ -1.36
CASP4P49662 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
CASP4P49662 LINC01013-205ENST00000458028 1345 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
CASP4P49662 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC6.54□□□□□ -1.36
CASP4P49662 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC6.54□□□□□ -1.36
CASP4P49662 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC6.54□□□□□ -1.36
CASP4P49662 ING3-204ENST00000431467 1447 ntTSL 2 BASIC6.54□□□□□ -1.36
CASP4P49662 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC6.54□□□□□ -1.36
CASP4P49662 RPS26P38-201ENST00000414476 348 ntBASIC6.54□□□□□ -1.36
CASP4P49662 MTND4LP17-201ENST00000414607 293 ntBASIC6.54□□□□□ -1.36
CASP4P49662 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC6.54□□□□□ -1.36
CASP4P49662 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
CASP4P49662 RN7SL269P-201ENST00000467795 305 ntBASIC6.54□□□□□ -1.36
CASP4P49662 AC108941.2-201ENST00000506796 716 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
CASP4P49662 LDHAP1-201ENST00000509421 992 ntBASIC6.54□□□□□ -1.36
CASP4P49662 LINC01151-201ENST00000521608 571 ntTSL 4 BASIC6.54□□□□□ -1.36
CASP4P49662 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC6.54□□□□□ -1.36
CASP4P49662 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC6.54□□□□□ -1.36
CASP4P49662 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC6.54□□□□□ -1.36
CASP4P49662 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC6.54□□□□□ -1.36
CASP4P49662 AC092266.1-201ENST00000610958 165 ntBASIC6.54□□□□□ -1.36
CASP4P49662 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC6.54□□□□□ -1.36
CASP4P49662 AC073592.6-201ENST00000624271 415 ntBASIC6.54□□□□□ -1.36
CASP4P49662 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC6.54□□□□□ -1.36
CASP4P49662 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC6.54□□□□□ -1.36
CASP4P49662 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
CASP4P49662 OR7A10-202ENST00000641129 1847 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
CASP4P49662 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC6.54□□□□□ -1.36
CASP4P49662 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
CASP4P49662 AL161756.3-201ENST00000641216 2071 ntBASIC6.54□□□□□ -1.36
CASP4P49662 AL161901.1-201ENST00000624954 3425 ntBASIC6.54□□□□□ -1.36
CASP4P49662 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
CASP4P49662 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC6.54□□□□□ -1.36
CASP4P49662 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC6.53□□□□□ -1.36
CASP4P49662 ZNF610-202ENST00000327920 1855 ntAPPRIS P3 TSL 2 BASIC6.53□□□□□ -1.36
CASP4P49662 MBNL3-206ENST00000394311 11263 ntTSL 2 BASIC6.53□□□□□ -1.36
CASP4P49662 DNHD1-212ENST00000527990 14298 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
CASP4P49662 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
CASP4P49662 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC6.53□□□□□ -1.36
CASP4P49662 AL096800.1-201ENST00000405326 893 ntBASIC6.53□□□□□ -1.36
CASP4P49662 SNRPEP6-201ENST00000407465 277 ntBASIC6.53□□□□□ -1.36
CASP4P49662 AL354890.1-201ENST00000413730 346 ntBASIC6.53□□□□□ -1.36
CASP4P49662 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC6.53□□□□□ -1.36
CASP4P49662 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC6.53□□□□□ -1.36
CASP4P49662 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC6.53□□□□□ -1.36
CASP4P49662 RPS12P17-201ENST00000438591 377 ntBASIC6.53□□□□□ -1.36
CASP4P49662 AMYP1-201ENST00000440059 1023 ntBASIC6.53□□□□□ -1.36
CASP4P49662 AC098847.1-201ENST00000473094 348 ntBASIC6.53□□□□□ -1.36
CASP4P49662 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC6.53□□□□□ -1.36
CASP4P49662 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC6.53□□□□□ -1.36
CASP4P49662 TOMM22P4-201ENST00000511318 336 ntBASIC6.53□□□□□ -1.36
CASP4P49662 RN7SKP288-201ENST00000516227 268 ntBASIC6.53□□□□□ -1.36
CASP4P49662 RNA5SP340-201ENST00000517132 107 ntBASIC6.53□□□□□ -1.36
CASP4P49662 BCAS2P1-201ENST00000528022 632 ntBASIC6.53□□□□□ -1.36
CASP4P49662 MED21-206ENST00000546323 575 ntTSL 3 BASIC6.53□□□□□ -1.36
CASP4P49662 COPZ1-205ENST00000548753 778 ntTSL 3 BASIC6.53□□□□□ -1.36
CASP4P49662 COPZ1-218ENST00000553231 551 ntTSL 5 BASIC6.53□□□□□ -1.36
CASP4P49662 AL049779.3-201ENST00000557141 606 ntBASIC6.53□□□□□ -1.36
CASP4P49662 AC004034.1-201ENST00000573260 510 ntTSL 3 BASIC6.53□□□□□ -1.36
CASP4P49662 AL589935.1-201ENST00000602418 488 ntTSL 4 BASIC6.53□□□□□ -1.36
CASP4P49662 AL136228.1-201ENST00000622221 319 ntBASIC6.53□□□□□ -1.36
CASP4P49662 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC6.53□□□□□ -1.36
CASP4P49662 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC6.53□□□□□ -1.36
CASP4P49662 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
CASP4P49662 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
CASP4P49662 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
CASP4P49662 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC6.53□□□□□ -1.36
CASP4P49662 HSPD1P9-201ENST00000420325 1636 ntBASIC6.53□□□□□ -1.36
CASP4P49662 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC6.53□□□□□ -1.36
CASP4P49662 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC6.53□□□□□ -1.36
CASP4P49662 LINC01602-201ENST00000522992 2109 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
CASP4P49662 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC6.53□□□□□ -1.36
CASP4P49662 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC6.53□□□□□ -1.36
CASP4P49662 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC6.53□□□□□ -1.36
CASP4P49662 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC6.53□□□□□ -1.36
CASP4P49662 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC6.53□□□□□ -1.36
CASP4P49662 FAM240A-201ENST00000444264 1826 ntAPPRIS P2 TSL 2 BASIC6.53□□□□□ -1.36
CASP4P49662 FAM240A-202ENST00000640551 1826 ntAPPRIS ALT2 TSL 2 BASIC6.53□□□□□ -1.36
CASP4P49662 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
CASP4P49662 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC6.52□□□□□ -1.36
CASP4P49662 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC6.52□□□□□ -1.36
CASP4P49662 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC6.52□□□□□ -1.36
CASP4P49662 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
CASP4P49662 CFAP61-201ENST00000245957 4082 ntAPPRIS P2 TSL 1 (best) BASIC6.52□□□□□ -1.37
CASP4P49662 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
CASP4P49662 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
CASP4P49662 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
CASP4P49662 IFIT1P1-201ENST00000400497 1449 ntBASIC6.52□□□□□ -1.37
CASP4P49662 AC093225.1-201ENST00000506867 1408 ntBASIC6.52□□□□□ -1.37
CASP4P49662 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
CASP4P49662 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC6.52□□□□□ -1.37
CASP4P49662 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC6.52□□□□□ -1.37
CASP4P49662 UQCC1-208ENST00000397554 3638 ntTSL 2 BASIC6.52□□□□□ -1.37
CASP4P49662 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC6.52□□□□□ -1.37
CASP4P49662 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC6.52□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 88.8 ms