Protein–RNA interactions for Protein: P36406

TRIM23, E3 ubiquitin-protein ligase TRIM23, humanhuman

Predictions only

Length 574 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23P36406 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC6.13□□□□□ -1.43
TRIM23P36406 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC6.13□□□□□ -1.43
TRIM23P36406 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
TRIM23P36406 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
TRIM23P36406 USP40-202ENST00000409945 1946 ntTSL 2 BASIC6.13□□□□□ -1.43
TRIM23P36406 ZNF254-207ENST00000613065 4244 ntTSL 3 BASIC6.13□□□□□ -1.43
TRIM23P36406 RIOK2-202ENST00000508447 2149 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
TRIM23P36406 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
TRIM23P36406 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
TRIM23P36406 NPHP3-AS1-202ENST00000504440 2507 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
TRIM23P36406 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
TRIM23P36406 ANKRD12-201ENST00000262126 11288 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
TRIM23P36406 CEP112-201ENST00000317442 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
TRIM23P36406 SNORA43.1-201ENST00000364863 140 ntBASIC6.12□□□□□ -1.43
TRIM23P36406 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
TRIM23P36406 ZNF484-202ENST00000375495 2867 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
TRIM23P36406 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC6.12□□□□□ -1.43
TRIM23P36406 MIR130B-202ENST00000385018 82 ntBASIC6.12□□□□□ -1.43
TRIM23P36406 RNU11-6P-201ENST00000391127 133 ntBASIC6.12□□□□□ -1.43
TRIM23P36406 NPM1P37-201ENST00000403105 874 ntBASIC6.12□□□□□ -1.43
TRIM23P36406 LINC01114-201ENST00000421071 482 ntTSL 3 BASIC6.12□□□□□ -1.43
TRIM23P36406 AC115283.1-201ENST00000427353 400 ntBASIC6.12□□□□□ -1.43
TRIM23P36406 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC6.12□□□□□ -1.43
TRIM23P36406 AC009237.1-201ENST00000442127 744 ntBASIC6.12□□□□□ -1.43
TRIM23P36406 OR13K1P-201ENST00000444577 975 ntBASIC6.12□□□□□ -1.43
TRIM23P36406 LINC02083-201ENST00000462835 515 ntTSL 3 BASIC6.12□□□□□ -1.43
TRIM23P36406 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC6.12□□□□□ -1.43
TRIM23P36406 AC022325.1-201ENST00000502748 2199 ntBASIC6.12□□□□□ -1.43
TRIM23P36406 UGT2B24P-201ENST00000514441 1597 ntBASIC6.12□□□□□ -1.43
TRIM23P36406 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC6.12□□□□□ -1.43
TRIM23P36406 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
TRIM23P36406 LINC02307-201ENST00000553827 257 ntTSL 3 BASIC6.12□□□□□ -1.43
TRIM23P36406 AC090826.1-203ENST00000569235 490 ntBASIC6.12□□□□□ -1.43
TRIM23P36406 AC010401.2-201ENST00000575137 4934 ntBASIC6.12□□□□□ -1.43
TRIM23P36406 MIR3189-201ENST00000578735 73 ntBASIC6.12□□□□□ -1.43
TRIM23P36406 AC005726.4-201ENST00000582858 458 ntBASIC6.12□□□□□ -1.43
TRIM23P36406 MIR4310-201ENST00000582950 57 ntBASIC6.12□□□□□ -1.43
TRIM23P36406 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC6.12□□□□□ -1.43
TRIM23P36406 AC027229.1-201ENST00000583887 253 ntBASIC6.12□□□□□ -1.43
TRIM23P36406 AC108865.2-201ENST00000606881 432 ntBASIC6.12□□□□□ -1.43
TRIM23P36406 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC6.12□□□□□ -1.43
TRIM23P36406 AC004801.6-201ENST00000616571 978 ntBASIC6.12□□□□□ -1.43
TRIM23P36406 AC024884.1-201ENST00000620583 399 ntBASIC6.12□□□□□ -1.43
TRIM23P36406 AC010809.3-201ENST00000621310 641 ntBASIC6.12□□□□□ -1.43
TRIM23P36406 AC005261.6-201ENST00000623072 1387 ntBASIC6.12□□□□□ -1.43
TRIM23P36406 AC022726.2-201ENST00000634673 547 ntBASIC6.12□□□□□ -1.43
TRIM23P36406 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
TRIM23P36406 DGKB-202ENST00000402815 5595 ntAPPRIS ALT1 TSL 5 BASIC6.12□□□□□ -1.43
TRIM23P36406 IARS-213ENST00000627121 4587 ntTSL 5 BASIC6.12□□□□□ -1.43
TRIM23P36406 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC6.12□□□□□ -1.43
TRIM23P36406 ODF2-205ENST00000393527 3653 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
TRIM23P36406 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
TRIM23P36406 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC6.12□□□□□ -1.43
TRIM23P36406 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC6.12□□□□□ -1.43
TRIM23P36406 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
TRIM23P36406 LINC01606-203ENST00000519160 2292 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
TRIM23P36406 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC6.11□□□□□ -1.43
TRIM23P36406 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC6.11□□□□□ -1.43
TRIM23P36406 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
TRIM23P36406 BPIFC-201ENST00000300399 1980 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
TRIM23P36406 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
TRIM23P36406 PSG5-210ENST00000599812 1884 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
TRIM23P36406 AL449283.1-201ENST00000602631 3403 ntBASIC6.11□□□□□ -1.43
TRIM23P36406 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
TRIM23P36406 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
TRIM23P36406 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC6.11□□□□□ -1.43
TRIM23P36406 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC6.11□□□□□ -1.43
TRIM23P36406 MBNL2-202ENST00000345429 4669 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
TRIM23P36406 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC6.11□□□□□ -1.43
TRIM23P36406 ZMYM2-210ENST00000610343 10200 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
TRIM23P36406 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC6.11□□□□□ -1.43
TRIM23P36406 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
TRIM23P36406 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
TRIM23P36406 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
TRIM23P36406 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
TRIM23P36406 AC090616.2-201ENST00000358484 431 ntTSL 3 BASIC6.11□□□□□ -1.43
TRIM23P36406 RNU1-134P-201ENST00000362935 165 ntBASIC6.11□□□□□ -1.43
TRIM23P36406 RN7SKP15-201ENST00000364742 309 ntBASIC6.11□□□□□ -1.43
TRIM23P36406 NACAP7-201ENST00000407371 609 ntBASIC6.11□□□□□ -1.43
TRIM23P36406 RNA5SP156-201ENST00000410250 110 ntBASIC6.11□□□□□ -1.43
TRIM23P36406 AL353626.3-201ENST00000413399 657 ntBASIC6.11□□□□□ -1.43
TRIM23P36406 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC6.11□□□□□ -1.43
TRIM23P36406 PMCHL1-203ENST00000423301 697 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
TRIM23P36406 AC008073.2-201ENST00000428344 792 ntTSL 5 BASIC6.11□□□□□ -1.43
TRIM23P36406 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
TRIM23P36406 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
TRIM23P36406 ATP6V1E1P1-201ENST00000439215 681 ntBASIC6.11□□□□□ -1.43
TRIM23P36406 SEPT14P12-201ENST00000442280 560 ntBASIC6.11□□□□□ -1.43
TRIM23P36406 TRIM60P16-201ENST00000444048 694 ntBASIC6.11□□□□□ -1.43
TRIM23P36406 AC144530.1-201ENST00000452862 555 ntBASIC6.11□□□□□ -1.43
TRIM23P36406 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC6.11□□□□□ -1.43
TRIM23P36406 AC025524.2-206ENST00000517953 439 ntTSL 3 BASIC6.11□□□□□ -1.43
TRIM23P36406 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC6.11□□□□□ -1.43
TRIM23P36406 AC021269.1-201ENST00000526860 705 ntBASIC6.11□□□□□ -1.43
TRIM23P36406 OR6M2P-201ENST00000529831 871 ntBASIC6.11□□□□□ -1.43
TRIM23P36406 AC016993.1-201ENST00000547033 1258 ntTSL 3 BASIC6.11□□□□□ -1.43
TRIM23P36406 BICD1-206ENST00000551086 423 ntTSL 3 BASIC6.11□□□□□ -1.43
TRIM23P36406 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC6.11□□□□□ -1.43
TRIM23P36406 LINC00871-204ENST00000556886 866 ntTSL 3 BASIC6.11□□□□□ -1.43
TRIM23P36406 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC6.11□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 135.1 ms