Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC4.33□□□□□ -1.72
CKS2P33552 LINC01151-201ENST00000521608 571 ntTSL 4 BASIC4.33□□□□□ -1.72
CKS2P33552 AC246817.2-201ENST00000523971 577 ntTSL 5 BASIC4.33□□□□□ -1.72
CKS2P33552 DEFB134-202ENST00000526438 1068 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CKS2P33552 AP001858.2-201ENST00000536213 601 ntBASIC4.33□□□□□ -1.72
CKS2P33552 UBE2N-204ENST00000549833 960 ntTSL 3 BASIC4.33□□□□□ -1.72
CKS2P33552 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC4.33□□□□□ -1.72
CKS2P33552 AC126615.2-201ENST00000553003 515 ntBASIC4.33□□□□□ -1.72
CKS2P33552 AC005519.1-201ENST00000554490 601 ntBASIC4.33□□□□□ -1.72
CKS2P33552 OTX2-203ENST00000554559 715 ntTSL 5 BASIC4.33□□□□□ -1.72
CKS2P33552 AL132989.1-201ENST00000557322 576 ntTSL 3 BASIC4.33□□□□□ -1.72
CKS2P33552 AC022898.1-202ENST00000560864 806 ntTSL 2 BASIC4.33□□□□□ -1.72
CKS2P33552 MIR4433B-201ENST00000581329 102 ntBASIC4.33□□□□□ -1.72
CKS2P33552 AC011193.2-201ENST00000582638 367 ntBASIC4.33□□□□□ -1.72
CKS2P33552 RN7SL475P-201ENST00000583379 298 ntBASIC4.33□□□□□ -1.72
CKS2P33552 AC119403.2-201ENST00000590960 598 ntBASIC4.33□□□□□ -1.72
CKS2P33552 EXOSC3P2-201ENST00000594464 497 ntBASIC4.33□□□□□ -1.72
CKS2P33552 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CKS2P33552 AL049840.6-201ENST00000604583 345 ntBASIC4.33□□□□□ -1.72
CKS2P33552 NDUFB9P1-201ENST00000604683 510 ntBASIC4.33□□□□□ -1.72
CKS2P33552 FXYD6P1-201ENST00000604857 285 ntBASIC4.33□□□□□ -1.72
CKS2P33552 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC4.33□□□□□ -1.72
CKS2P33552 AL596325.2-201ENST00000609669 505 ntTSL 3 BASIC4.33□□□□□ -1.72
CKS2P33552 uc_338.26-201ENST00000612659 160 ntBASIC4.33□□□□□ -1.72
CKS2P33552 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC4.33□□□□□ -1.72
CKS2P33552 AC027506.1-201ENST00000621395 198 ntBASIC4.33□□□□□ -1.72
CKS2P33552 AC013489.3-201ENST00000623274 517 ntBASIC4.33□□□□□ -1.72
CKS2P33552 AC022400.9-201ENST00000623633 273 ntBASIC4.33□□□□□ -1.72
CKS2P33552 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC4.33□□□□□ -1.72
CKS2P33552 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC4.33□□□□□ -1.72
CKS2P33552 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CKS2P33552 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC4.33□□□□□ -1.72
CKS2P33552 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC4.33□□□□□ -1.72
CKS2P33552 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CKS2P33552 NT5C2-201ENST00000343289 3435 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CKS2P33552 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CKS2P33552 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC4.33□□□□□ -1.72
CKS2P33552 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC4.33□□□□□ -1.72
CKS2P33552 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC4.33□□□□□ -1.72
CKS2P33552 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CKS2P33552 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
CKS2P33552 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
CKS2P33552 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CKS2P33552 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC4.32□□□□□ -1.72
CKS2P33552 AP000473.2-201ENST00000602659 1537 ntBASIC4.32□□□□□ -1.72
CKS2P33552 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC4.32□□□□□ -1.72
CKS2P33552 GTF2H3-201ENST00000228955 1472 ntTSL 2 BASIC4.32□□□□□ -1.72
CKS2P33552 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.32□□□□□ -1.72
CKS2P33552 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC4.32□□□□□ -1.72
CKS2P33552 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC4.32□□□□□ -1.72
CKS2P33552 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CKS2P33552 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC4.32□□□□□ -1.72
CKS2P33552 SDHAF3-201ENST00000360382 731 ntTSL 2 BASIC4.32□□□□□ -1.72
CKS2P33552 RN7SKP145-201ENST00000363291 303 ntBASIC4.32□□□□□ -1.72
CKS2P33552 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC4.32□□□□□ -1.72
CKS2P33552 AC019178.1-201ENST00000392337 440 ntBASIC4.32□□□□□ -1.72
CKS2P33552 SULT1C2-204ENST00000409880 1206 ntTSL 3 BASIC4.32□□□□□ -1.72
CKS2P33552 RN7SKP221-201ENST00000410420 301 ntBASIC4.32□□□□□ -1.72
CKS2P33552 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CKS2P33552 AL512363.1-201ENST00000425089 586 ntTSL 2 BASIC4.32□□□□□ -1.72
CKS2P33552 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC4.32□□□□□ -1.72
CKS2P33552 C5orf24-203ENST00000435259 851 ntAPPRIS P1 TSL 3 BASIC4.32□□□□□ -1.72
CKS2P33552 AP001048.1-201ENST00000436359 280 ntTSL 2 BASIC4.32□□□□□ -1.72
CKS2P33552 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC4.32□□□□□ -1.72
CKS2P33552 AC104233.1-201ENST00000458107 339 ntTSL 5 BASIC4.32□□□□□ -1.72
CKS2P33552 RNU1-88P-201ENST00000459274 128 ntBASIC4.32□□□□□ -1.72
CKS2P33552 RN7SL91P-201ENST00000469313 291 ntBASIC4.32□□□□□ -1.72
CKS2P33552 CLDND1-205ENST00000502288 560 ntTSL 4 BASIC4.32□□□□□ -1.72
CKS2P33552 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC4.32□□□□□ -1.72
CKS2P33552 NPM1P21-201ENST00000513394 762 ntBASIC4.32□□□□□ -1.72
CKS2P33552 CHCHD7-205ENST00000517933 580 ntAPPRIS P1 TSL 4 BASIC4.32□□□□□ -1.72
CKS2P33552 AC026979.2-201ENST00000523733 583 ntTSL 5 BASIC4.32□□□□□ -1.72
CKS2P33552 OR56A7P-201ENST00000524865 941 ntBASIC4.32□□□□□ -1.72
CKS2P33552 AL133399.1-201ENST00000527476 298 ntBASIC4.32□□□□□ -1.72
CKS2P33552 AP004609.2-201ENST00000532177 190 ntBASIC4.32□□□□□ -1.72
CKS2P33552 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC4.32□□□□□ -1.72
CKS2P33552 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC4.32□□□□□ -1.72
CKS2P33552 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC4.32□□□□□ -1.72
CKS2P33552 MIR4262-201ENST00000578394 54 ntBASIC4.32□□□□□ -1.72
CKS2P33552 AP006587.6-201ENST00000582128 1091 ntBASIC4.32□□□□□ -1.72
CKS2P33552 TPGS2-204ENST00000587129 841 ntTSL 4 BASIC4.32□□□□□ -1.72
CKS2P33552 AC012254.2-203ENST00000588705 561 ntAPPRIS P5 TSL 2 BASIC4.32□□□□□ -1.72
CKS2P33552 AC024451.4-201ENST00000602578 752 ntBASIC4.32□□□□□ -1.72
CKS2P33552 GMDS-AS1-215ENST00000606884 580 ntTSL 2 BASIC4.32□□□□□ -1.72
CKS2P33552 MIR6133-201ENST00000617057 108 ntBASIC4.32□□□□□ -1.72
CKS2P33552 AL353684.1-201ENST00000622677 1120 ntBASIC4.32□□□□□ -1.72
CKS2P33552 ATM-229ENST00000639953 587 ntTSL 5 BASIC4.32□□□□□ -1.72
CKS2P33552 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC4.32□□□□□ -1.72
CKS2P33552 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC4.32□□□□□ -1.72
CKS2P33552 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC4.32□□□□□ -1.72
CKS2P33552 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC4.32□□□□□ -1.72
CKS2P33552 GABRA2-215ENST00000540012 2588 ntTSL 5 BASIC4.32□□□□□ -1.72
CKS2P33552 ATP8B5P-203ENST00000430846 3962 ntTSL 2 BASIC4.32□□□□□ -1.72
CKS2P33552 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CKS2P33552 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC4.32□□□□□ -1.72
CKS2P33552 SMG1P4-204ENST00000523028 4131 ntBASIC4.31□□□□□ -1.72
CKS2P33552 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CKS2P33552 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC4.31□□□□□ -1.72
CKS2P33552 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CKS2P33552 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 141.9 ms