Protein–RNA interactions for Protein: P31269

HOXA9, Homeobox protein Hox-A9, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9P31269 LRRC37A16P-202ENST00000586022 3725 ntBASIC6.39□□□□□ -1.39
HOXA9P31269 GSTA5-201ENST00000284562 845 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
HOXA9P31269 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
HOXA9P31269 RNA5SP242-201ENST00000364171 118 ntBASIC6.39□□□□□ -1.39
HOXA9P31269 RNU105B-201ENST00000364478 208 ntBASIC6.39□□□□□ -1.39
HOXA9P31269 PPCS-201ENST00000372556 984 ntTSL 2 BASIC6.39□□□□□ -1.39
HOXA9P31269 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
HOXA9P31269 AK3P5-201ENST00000432033 519 ntBASIC6.39□□□□□ -1.39
HOXA9P31269 AC016027.4-201ENST00000450866 277 ntBASIC6.39□□□□□ -1.39
HOXA9P31269 AC023245.1-201ENST00000468501 517 ntBASIC6.39□□□□□ -1.39
HOXA9P31269 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC6.39□□□□□ -1.39
HOXA9P31269 UBFD1P1-201ENST00000473259 814 ntBASIC6.39□□□□□ -1.39
HOXA9P31269 FTH1P8-201ENST00000498161 514 ntBASIC6.39□□□□□ -1.39
HOXA9P31269 AC027544.3-201ENST00000535082 757 ntBASIC6.39□□□□□ -1.39
HOXA9P31269 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC6.39□□□□□ -1.39
HOXA9P31269 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC6.39□□□□□ -1.39
HOXA9P31269 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC6.39□□□□□ -1.39
HOXA9P31269 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC6.39□□□□□ -1.39
HOXA9P31269 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC6.39□□□□□ -1.39
HOXA9P31269 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC6.39□□□□□ -1.39
HOXA9P31269 OR8G3P-202ENST00000641572 1255 ntBASIC6.39□□□□□ -1.39
HOXA9P31269 MIR3681HG-201ENST00000412294 2183 ntTSL 2 BASIC6.39□□□□□ -1.39
HOXA9P31269 PARP4P1-201ENST00000435945 2337 ntBASIC6.39□□□□□ -1.39
HOXA9P31269 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC6.39□□□□□ -1.39
HOXA9P31269 AC125793.1-201ENST00000565238 1493 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
HOXA9P31269 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
HOXA9P31269 LGALS17A-201ENST00000412609 2562 ntTSL 2 BASIC6.39□□□□□ -1.39
HOXA9P31269 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC6.39□□□□□ -1.39
HOXA9P31269 SPRY3-201ENST00000302805 9019 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
HOXA9P31269 DSC1-202ENST00000257198 4225 ntAPPRIS P4 TSL 2 BASIC6.39□□□□□ -1.39
HOXA9P31269 MATR3-215ENST00000510056 3040 ntTSL 5 BASIC6.39□□□□□ -1.39
HOXA9P31269 LINC01450-201ENST00000443406 3263 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
HOXA9P31269 TMTC3-201ENST00000266712 7203 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
HOXA9P31269 AL591848.4-201ENST00000567832 3472 ntBASIC6.38□□□□□ -1.39
HOXA9P31269 RNF4-214ENST00000511600 4123 ntAPPRIS P1 TSL 2 BASIC6.38□□□□□ -1.39
HOXA9P31269 OR2T5-201ENST00000641363 2525 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
HOXA9P31269 ZNF490-201ENST00000311437 4237 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
HOXA9P31269 PTPRZ1-202ENST00000449182 4627 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
HOXA9P31269 KCNAB1-212ENST00000490337 3122 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
HOXA9P31269 LINC00284-201ENST00000423211 3208 ntTSL 2 BASIC6.38□□□□□ -1.39
HOXA9P31269 BTN3A2-203ENST00000396934 3672 ntAPPRIS ALT2 TSL 2 BASIC6.38□□□□□ -1.39
HOXA9P31269 CNTN5-202ENST00000418526 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
HOXA9P31269 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC6.38□□□□□ -1.39
HOXA9P31269 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
HOXA9P31269 AC016739.1-201ENST00000405359 345 ntBASIC6.38□□□□□ -1.39
HOXA9P31269 RN7SKP161-201ENST00000411110 305 ntBASIC6.38□□□□□ -1.39
HOXA9P31269 AC245060.4-201ENST00000413293 1121 ntBASIC6.38□□□□□ -1.39
HOXA9P31269 AL354890.1-201ENST00000413730 346 ntBASIC6.38□□□□□ -1.39
HOXA9P31269 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC6.38□□□□□ -1.39
HOXA9P31269 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC6.38□□□□□ -1.39
HOXA9P31269 AL121776.1-201ENST00000429337 372 ntBASIC6.38□□□□□ -1.39
HOXA9P31269 AC009237.1-201ENST00000442127 744 ntBASIC6.38□□□□□ -1.39
HOXA9P31269 AC064862.4-201ENST00000442180 334 ntBASIC6.38□□□□□ -1.39
HOXA9P31269 RN7SL269P-201ENST00000467795 305 ntBASIC6.38□□□□□ -1.39
HOXA9P31269 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC6.38□□□□□ -1.39
HOXA9P31269 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC6.38□□□□□ -1.39
HOXA9P31269 AC124945.1-201ENST00000485133 188 ntBASIC6.38□□□□□ -1.39
HOXA9P31269 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC6.38□□□□□ -1.39
HOXA9P31269 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC6.38□□□□□ -1.39
HOXA9P31269 OR6M2P-201ENST00000529831 871 ntBASIC6.38□□□□□ -1.39
HOXA9P31269 OR5AP2-201ENST00000544374 1006 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
HOXA9P31269 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC6.38□□□□□ -1.39
HOXA9P31269 AL356801.1-201ENST00000559320 294 ntBASIC6.38□□□□□ -1.39
HOXA9P31269 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC6.38□□□□□ -1.39
HOXA9P31269 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC6.38□□□□□ -1.39
HOXA9P31269 Xist_exon4.1-201ENST00000615964 126 ntBASIC6.38□□□□□ -1.39
HOXA9P31269 AL137067.2-201ENST00000621202 131 ntBASIC6.38□□□□□ -1.39
HOXA9P31269 AC116667.2-201ENST00000641075 823 ntBASIC6.38□□□□□ -1.39
HOXA9P31269 CCDC190-202ENST00000367911 1395 ntAPPRIS P2 TSL 3 BASIC6.38□□□□□ -1.39
HOXA9P31269 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC6.38□□□□□ -1.39
HOXA9P31269 MED12L-206ENST00000474524 10744 ntAPPRIS P2 TSL 1 (best) BASIC6.38□□□□□ -1.39
HOXA9P31269 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
HOXA9P31269 AL359091.1-201ENST00000449048 1734 ntBASIC6.38□□□□□ -1.39
HOXA9P31269 SORCS1-209ENST00000612154 6862 ntTSL 5 BASIC6.38□□□□□ -1.39
HOXA9P31269 TNPO1P2-201ENST00000426249 2665 ntBASIC6.38□□□□□ -1.39
HOXA9P31269 MUC5AC-201ENST00000621226 17448 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
HOXA9P31269 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC6.38□□□□□ -1.39
HOXA9P31269 ANKRD44-201ENST00000282272 5147 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
HOXA9P31269 ZBTB21-205ENST00000398511 5608 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
HOXA9P31269 PRDM2-202ENST00000311066 7437 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
HOXA9P31269 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC6.37□□□□□ -1.39
HOXA9P31269 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
HOXA9P31269 NR5A2-203ENST00000367362 5086 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
HOXA9P31269 PYROXD1-205ENST00000538582 3639 ntTSL 2 BASIC6.37□□□□□ -1.39
HOXA9P31269 TCF4-225ENST00000564999 3590 ntAPPRIS P3 TSL 5 BASIC6.37□□□□□ -1.39
HOXA9P31269 ENPP3-203ENST00000414305 3418 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
HOXA9P31269 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC6.37□□□□□ -1.39
HOXA9P31269 GBA3-206ENST00000610628 2154 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
HOXA9P31269 ZNF585B-205ENST00000532828 6210 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
HOXA9P31269 PSG5-210ENST00000599812 1884 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
HOXA9P31269 MAGEB16-204ENST00000399989 1818 ntAPPRIS P2 TSL 5 BASIC6.37□□□□□ -1.39
HOXA9P31269 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC6.37□□□□□ -1.39
HOXA9P31269 WDR95P-201ENST00000425638 1542 ntBASIC6.37□□□□□ -1.39
HOXA9P31269 MIPOL1-201ENST00000327441 7185 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
HOXA9P31269 CFAP57-208ENST00000610710 4162 ntTSL 5 BASIC6.37□□□□□ -1.39
HOXA9P31269 GOLGA6L22-204ENST00000622895 4178 ntAPPRIS P5 TSL 5 BASIC6.37□□□□□ -1.39
HOXA9P31269 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
HOXA9P31269 MIR375-201ENST00000362103 64 ntBASIC6.37□□□□□ -1.39
HOXA9P31269 RNA5SP333-201ENST00000363466 118 ntBASIC6.37□□□□□ -1.39
HOXA9P31269 RNA5SP334-201ENST00000364825 118 ntBASIC6.37□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 98 ms