Protein–RNA interactions for Protein: P20908

COL5A1, Collagen alpha-1(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1P20908 AC008629.2-201ENST00000503783 483 ntBASIC5.77□□□□□ -1.49
COL5A1P20908 BX510359.5-201ENST00000515651 304 ntBASIC5.77□□□□□ -1.49
COL5A1P20908 OR56A7P-201ENST00000524865 941 ntBASIC5.77□□□□□ -1.49
COL5A1P20908 HAUS8P1-201ENST00000549005 542 ntBASIC5.77□□□□□ -1.49
COL5A1P20908 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC5.77□□□□□ -1.49
COL5A1P20908 LINC02310-201ENST00000556762 572 ntTSL 4 BASIC5.77□□□□□ -1.49
COL5A1P20908 MIR3691-201ENST00000578066 90 ntBASIC5.77□□□□□ -1.49
COL5A1P20908 Z98949.1-210ENST00000597548 766 ntTSL 5 BASIC5.77□□□□□ -1.49
COL5A1P20908 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC5.77□□□□□ -1.49
COL5A1P20908 MIR7155-201ENST00000615925 56 ntBASIC5.77□□□□□ -1.49
COL5A1P20908 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC5.77□□□□□ -1.49
COL5A1P20908 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC5.77□□□□□ -1.49
COL5A1P20908 AC003992.1-201ENST00000635364 557 ntBASIC5.77□□□□□ -1.49
COL5A1P20908 MIR3681HG-201ENST00000412294 2183 ntTSL 2 BASIC5.77□□□□□ -1.49
COL5A1P20908 OR7C1-205ENST00000642030 11778 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
COL5A1P20908 TENM4-201ENST00000278550 14000 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
COL5A1P20908 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC5.77□□□□□ -1.49
COL5A1P20908 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
COL5A1P20908 OAS2-201ENST00000342315 3613 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
COL5A1P20908 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC5.77□□□□□ -1.49
COL5A1P20908 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC5.77□□□□□ -1.49
COL5A1P20908 PABPC1P6-201ENST00000445594 1829 ntBASIC5.77□□□□□ -1.49
COL5A1P20908 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC5.77□□□□□ -1.49
COL5A1P20908 RPGRIP1L-202ENST00000379925 5297 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
COL5A1P20908 CACNB4-225ENST00000636442 4232 ntTSL 5 BASIC5.77□□□□□ -1.49
COL5A1P20908 FBXL21-201ENST00000297158 1305 ntBASIC5.77□□□□□ -1.49
COL5A1P20908 AC235565.1-201ENST00000456962 1325 ntBASIC5.77□□□□□ -1.49
COL5A1P20908 AC117409.1-201ENST00000470499 1310 ntBASIC5.77□□□□□ -1.49
COL5A1P20908 GGCX-201ENST00000233838 7569 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
COL5A1P20908 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC5.77□□□□□ -1.49
COL5A1P20908 CTNND1-220ENST00000529526 6099 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
COL5A1P20908 FOXJ3-203ENST00000372571 4468 ntTSL 2 BASIC5.77□□□□□ -1.49
COL5A1P20908 C14orf166-201ENST00000261700 7075 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
COL5A1P20908 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
COL5A1P20908 NEUROD4-201ENST00000242994 3953 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
COL5A1P20908 AP001541.1-201ENST00000623322 1904 ntBASIC5.77□□□□□ -1.49
COL5A1P20908 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC5.77□□□□□ -1.49
COL5A1P20908 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC5.76□□□□□ -1.49
COL5A1P20908 CCNT1-201ENST00000261900 6973 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
COL5A1P20908 NEDD9-216ENST00000620854 4086 ntTSL 5 BASIC5.76□□□□□ -1.49
COL5A1P20908 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
COL5A1P20908 HSDL2-201ENST00000398803 2983 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
COL5A1P20908 AC015977.1-201ENST00000418887 292 ntBASIC5.76□□□□□ -1.49
COL5A1P20908 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
COL5A1P20908 RPL21P133-201ENST00000443666 476 ntBASIC5.76□□□□□ -1.49
COL5A1P20908 RPS27AP3-201ENST00000453803 454 ntBASIC5.76□□□□□ -1.49
COL5A1P20908 RPS17P15-201ENST00000475609 349 ntBASIC5.76□□□□□ -1.49
COL5A1P20908 AL035690.1-201ENST00000490892 383 ntBASIC5.76□□□□□ -1.49
COL5A1P20908 AC083795.1-201ENST00000491760 320 ntBASIC5.76□□□□□ -1.49
COL5A1P20908 RN7SL57P-201ENST00000493687 290 ntBASIC5.76□□□□□ -1.49
COL5A1P20908 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC5.76□□□□□ -1.49
COL5A1P20908 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC5.76□□□□□ -1.49
COL5A1P20908 AC119403.2-201ENST00000590960 598 ntBASIC5.76□□□□□ -1.49
COL5A1P20908 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
COL5A1P20908 FO393422.1-201ENST00000603908 708 ntBASIC5.76□□□□□ -1.49
COL5A1P20908 AC012557.1-201ENST00000607115 611 ntBASIC5.76□□□□□ -1.49
COL5A1P20908 AL445649.1-201ENST00000615941 691 ntBASIC5.76□□□□□ -1.49
COL5A1P20908 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC5.76□□□□□ -1.49
COL5A1P20908 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC5.76□□□□□ -1.49
COL5A1P20908 ATM-229ENST00000639953 587 ntTSL 5 BASIC5.76□□□□□ -1.49
COL5A1P20908 FBXO40-201ENST00000338040 5929 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
COL5A1P20908 NLGN4X-202ENST00000381092 3750 ntAPPRIS P2 TSL 2 BASIC5.76□□□□□ -1.49
COL5A1P20908 CTNND1-207ENST00000426142 5800 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
COL5A1P20908 FSHR-202ENST00000406846 2784 ntAPPRIS P4 TSL 1 (best) BASIC5.76□□□□□ -1.49
COL5A1P20908 NFIA-201ENST00000357977 3200 ntTSL 2 BASIC5.76□□□□□ -1.49
COL5A1P20908 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC5.76□□□□□ -1.49
COL5A1P20908 AC096921.2-201ENST00000561507 1916 ntBASIC5.76□□□□□ -1.49
COL5A1P20908 ERLIN2-201ENST00000276461 6073 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
COL5A1P20908 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
COL5A1P20908 ZNF106-201ENST00000263805 10460 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
COL5A1P20908 ZNF793-201ENST00000445217 6712 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
COL5A1P20908 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
COL5A1P20908 AC068189.1-201ENST00000501164 2632 ntTSL 2 BASIC5.76□□□□□ -1.49
COL5A1P20908 GON4L-201ENST00000271883 7138 ntAPPRIS P3 TSL 5 BASIC5.76□□□□□ -1.49
COL5A1P20908 ZBTB21-204ENST00000398505 6846 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
COL5A1P20908 PSG5-210ENST00000599812 1884 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
COL5A1P20908 SCUBE3-201ENST00000274938 7356 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
COL5A1P20908 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
COL5A1P20908 FAM186A-201ENST00000327337 7127 ntAPPRIS P2 TSL 5 BASIC5.76□□□□□ -1.49
COL5A1P20908 SNORA11-201ENST00000408789 128 ntBASIC5.76□□□□□ -1.49
COL5A1P20908 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC5.76□□□□□ -1.49
COL5A1P20908 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC5.76□□□□□ -1.49
COL5A1P20908 AL606490.8-201ENST00000441624 319 ntBASIC5.76□□□□□ -1.49
COL5A1P20908 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC5.76□□□□□ -1.49
COL5A1P20908 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC5.76□□□□□ -1.49
COL5A1P20908 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC5.76□□□□□ -1.49
COL5A1P20908 AC244502.2-201ENST00000543361 851 ntBASIC5.76□□□□□ -1.49
COL5A1P20908 TCEANC-205ENST00000544987 1146 ntTSL 5 BASIC5.76□□□□□ -1.49
COL5A1P20908 AC114488.3-201ENST00000581333 480 ntTSL 4 BASIC5.76□□□□□ -1.49
COL5A1P20908 Mico1.1-201ENST00000611698 204 ntBASIC5.76□□□□□ -1.49
COL5A1P20908 MIR193BHG-214ENST00000641765 509 ntBASIC5.76□□□□□ -1.49
COL5A1P20908 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC5.76□□□□□ -1.49
COL5A1P20908 OR2T7-201ENST00000641057 3463 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
COL5A1P20908 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
COL5A1P20908 NBPF25P-202ENST00000619932 3827 ntTSL 2 BASIC5.75□□□□□ -1.49
COL5A1P20908 DTNA-225ENST00000595022 6016 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
COL5A1P20908 ZNF484-204ENST00000395506 4031 ntTSL 3 BASIC5.75□□□□□ -1.49
COL5A1P20908 LINC01920-201ENST00000441356 2528 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
COL5A1P20908 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
COL5A1P20908 BRD7P6-201ENST00000431406 1860 ntBASIC5.75□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms