Protein–RNA interactions for Protein: P18858

LIG1, DNA ligase 1, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1P18858 RPL24P4-201ENST00000326586 421 ntBASIC7.9□□□□□ -1.14
LIG1P18858 PFKFB1-201ENST00000374992 1156 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
LIG1P18858 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC7.9□□□□□ -1.14
LIG1P18858 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
LIG1P18858 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
LIG1P18858 AC024937.2-201ENST00000411669 1242 ntBASIC7.9□□□□□ -1.14
LIG1P18858 AL139135.1-201ENST00000412675 209 ntBASIC7.9□□□□□ -1.14
LIG1P18858 NRIR-202ENST00000414795 506 ntTSL 3 BASIC7.9□□□□□ -1.14
LIG1P18858 RNF19BPX-201ENST00000426224 625 ntBASIC7.9□□□□□ -1.14
LIG1P18858 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC7.9□□□□□ -1.14
LIG1P18858 FABP5P3-201ENST00000437960 408 ntBASIC7.9□□□□□ -1.14
LIG1P18858 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC7.9□□□□□ -1.14
LIG1P18858 ST13P21-201ENST00000453250 1098 ntBASIC7.9□□□□□ -1.14
LIG1P18858 RPS26P24-201ENST00000497656 331 ntBASIC7.9□□□□□ -1.14
LIG1P18858 AC002401.2-201ENST00000511361 430 ntTSL 3 BASIC7.9□□□□□ -1.14
LIG1P18858 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC7.9□□□□□ -1.14
LIG1P18858 IGHVII-51-2-201ENST00000519778 259 ntBASIC7.9□□□□□ -1.14
LIG1P18858 NAT2-202ENST00000520116 716 ntTSL 3 BASIC7.9□□□□□ -1.14
LIG1P18858 NDUFA3P2-201ENST00000531434 232 ntBASIC7.9□□□□□ -1.14
LIG1P18858 AC079089.1-203ENST00000533300 431 ntTSL 5 BASIC7.9□□□□□ -1.14
LIG1P18858 PDCL3P1-201ENST00000534575 734 ntBASIC7.9□□□□□ -1.14
LIG1P18858 SLC25A51P2-201ENST00000535708 889 ntBASIC7.9□□□□□ -1.14
LIG1P18858 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC7.9□□□□□ -1.14
LIG1P18858 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC7.9□□□□□ -1.14
LIG1P18858 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC7.9□□□□□ -1.14
LIG1P18858 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC7.9□□□□□ -1.14
LIG1P18858 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC7.9□□□□□ -1.14
LIG1P18858 AC005208.1-202ENST00000587325 725 ntTSL 3 BASIC7.9□□□□□ -1.14
LIG1P18858 Metazoa_SRP.57-201ENST00000597717 283 ntBASIC7.9□□□□□ -1.14
LIG1P18858 U91328.4-201ENST00000608919 517 ntBASIC7.9□□□□□ -1.14
LIG1P18858 AC087565.2-201ENST00000637695 952 ntTSL 5 BASIC7.9□□□□□ -1.14
LIG1P18858 AL356585.10-201ENST00000641883 123 ntBASIC7.9□□□□□ -1.14
LIG1P18858 AC068389.1-202ENST00000526470 3564 ntTSL 2 BASIC7.9□□□□□ -1.14
LIG1P18858 TBC1D32-201ENST00000275159 4431 ntAPPRIS ALT2 TSL 5 BASIC7.9□□□□□ -1.15
LIG1P18858 MEF2C-226ENST00000625674 4343 ntAPPRIS P3 TSL 5 BASIC7.9□□□□□ -1.15
LIG1P18858 SOX5-205ENST00000451604 4261 ntTSL 1 (best) BASIC7.9□□□□□ -1.15
LIG1P18858 NPIPB5-205ENST00000424340 3801 ntAPPRIS P2 TSL 1 (best) BASIC7.9□□□□□ -1.15
LIG1P18858 ZNF337-202ENST00000376436 3613 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.15
LIG1P18858 EPB41L2-209ENST00000525193 2121 ntTSL 5 BASIC7.9□□□□□ -1.15
LIG1P18858 ATF7IP-201ENST00000261168 8878 ntAPPRIS P3 TSL 5 BASIC7.9□□□□□ -1.15
LIG1P18858 LINC01450-201ENST00000443406 3263 ntTSL 1 (best) BASIC7.9□□□□□ -1.15
LIG1P18858 OR2G6-202ENST00000641501 5840 ntAPPRIS P1 BASIC7.9□□□□□ -1.15
LIG1P18858 CIR1-201ENST00000342016 1921 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.15
LIG1P18858 WBP11P1-201ENST00000562560 1931 ntBASIC7.9□□□□□ -1.15
LIG1P18858 NUMB-204ENST00000535282 3198 ntAPPRIS ALT1 TSL 5 BASIC7.89□□□□□ -1.15
LIG1P18858 TRPM6-204ENST00000449912 8244 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
LIG1P18858 RRS1-AS1-201ENST00000499642 4366 ntTSL 2 BASIC7.89□□□□□ -1.15
LIG1P18858 PRLR-216ENST00000542609 1764 ntTSL 5 BASIC7.89□□□□□ -1.15
LIG1P18858 LINC00922-203ENST00000569736 1760 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
LIG1P18858 CMAHP-202ENST00000377993 1681 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
LIG1P18858 PLCH1-206ENST00000494598 3525 ntTSL 5 BASIC7.89□□□□□ -1.15
LIG1P18858 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
LIG1P18858 FAM160A1-203ENST00000505231 4156 ntAPPRIS P1 TSL 5 BASIC7.89□□□□□ -1.15
LIG1P18858 CA10-204ENST00000570565 2276 ntTSL 5 BASIC7.89□□□□□ -1.15
LIG1P18858 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
LIG1P18858 OR4M1-201ENST00000315957 1116 ntAPPRIS P1 BASIC7.89□□□□□ -1.15
LIG1P18858 CLEC1B-202ENST00000348658 869 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
LIG1P18858 RNU5B-4P-201ENST00000363508 111 ntBASIC7.89□□□□□ -1.15
LIG1P18858 RNA5SP512-201ENST00000364550 120 ntBASIC7.89□□□□□ -1.15
LIG1P18858 RNA5SP355-201ENST00000365317 135 ntBASIC7.89□□□□□ -1.15
LIG1P18858 RN7SKP47-201ENST00000365347 328 ntBASIC7.89□□□□□ -1.15
LIG1P18858 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC7.89□□□□□ -1.15
LIG1P18858 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC7.89□□□□□ -1.15
LIG1P18858 DNASE1L3-201ENST00000394549 1294 ntAPPRIS P3 TSL 1 (best) BASIC7.89□□□□□ -1.15
LIG1P18858 AL161742.1-201ENST00000418154 584 ntBASIC7.89□□□□□ -1.15
LIG1P18858 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC7.89□□□□□ -1.15
LIG1P18858 HMGB1P49-201ENST00000418882 569 ntBASIC7.89□□□□□ -1.15
LIG1P18858 PPIAP23-201ENST00000420099 497 ntBASIC7.89□□□□□ -1.15
LIG1P18858 AC106870.2-201ENST00000421411 691 ntTSL 3 BASIC7.89□□□□□ -1.15
LIG1P18858 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC7.89□□□□□ -1.15
LIG1P18858 AC099796.1-201ENST00000433377 683 ntTSL 3 BASIC7.89□□□□□ -1.15
LIG1P18858 RPS7P2-201ENST00000435134 607 ntBASIC7.89□□□□□ -1.15
LIG1P18858 AC009237.4-201ENST00000441078 238 ntBASIC7.89□□□□□ -1.15
LIG1P18858 AC083864.2-201ENST00000446024 482 ntTSL 3 BASIC7.89□□□□□ -1.15
LIG1P18858 AC019186.1-201ENST00000447019 545 ntTSL 3 BASIC7.89□□□□□ -1.15
LIG1P18858 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC7.89□□□□□ -1.15
LIG1P18858 RPLP0P1-201ENST00000457002 361 ntBASIC7.89□□□□□ -1.15
LIG1P18858 MYL6P4-201ENST00000477911 453 ntBASIC7.89□□□□□ -1.15
LIG1P18858 RPL7AP30-201ENST00000482859 796 ntBASIC7.89□□□□□ -1.15
LIG1P18858 AC063943.2-201ENST00000495697 534 ntBASIC7.89□□□□□ -1.15
LIG1P18858 RN7SL143P-201ENST00000496780 297 ntBASIC7.89□□□□□ -1.15
LIG1P18858 AL135933.1-201ENST00000498657 802 ntBASIC7.89□□□□□ -1.15
LIG1P18858 AK6-204ENST00000512561 587 ntTSL 5 BASIC7.89□□□□□ -1.15
LIG1P18858 RNU6-1334P-201ENST00000516032 105 ntBASIC7.89□□□□□ -1.15
LIG1P18858 MTND1P5-201ENST00000517906 940 ntBASIC7.89□□□□□ -1.15
LIG1P18858 AC010306.1-201ENST00000523223 1117 ntBASIC7.89□□□□□ -1.15
LIG1P18858 AP006587.5-201ENST00000532033 739 ntBASIC7.89□□□□□ -1.15
LIG1P18858 AP004607.5-201ENST00000532034 217 ntBASIC7.89□□□□□ -1.15
LIG1P18858 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC7.89□□□□□ -1.15
LIG1P18858 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC7.89□□□□□ -1.15
LIG1P18858 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC7.89□□□□□ -1.15
LIG1P18858 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC7.89□□□□□ -1.15
LIG1P18858 AC124283.4-201ENST00000581815 456 ntBASIC7.89□□□□□ -1.15
LIG1P18858 AC006262.2-201ENST00000599127 612 ntTSL 3 BASIC7.89□□□□□ -1.15
LIG1P18858 AC099785.1-201ENST00000605697 437 ntBASIC7.89□□□□□ -1.15
LIG1P18858 AC009283.1-201ENST00000615852 645 ntBASIC7.89□□□□□ -1.15
LIG1P18858 EDRF1-AS1-214ENST00000622798 526 ntTSL 5 BASIC7.89□□□□□ -1.15
LIG1P18858 AC016542.3-201ENST00000623520 619 ntBASIC7.89□□□□□ -1.15
LIG1P18858 ERMARD-202ENST00000366772 2003 ntTSL 5 BASIC7.89□□□□□ -1.15
LIG1P18858 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC7.89□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 82.9 ms