Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 AC004381.1-201ENST00000565498 351 ntTSL 5 BASIC6.76□□□□□ -1.33
COL6A2P12110 AC109446.2-201ENST00000567872 497 ntBASIC6.76□□□□□ -1.33
COL6A2P12110 AP005131.5-201ENST00000585817 498 ntTSL 3 BASIC6.76□□□□□ -1.33
COL6A2P12110 AC067852.5-201ENST00000589299 310 ntBASIC6.76□□□□□ -1.33
COL6A2P12110 AC020914.7-201ENST00000594477 545 ntBASIC6.76□□□□□ -1.33
COL6A2P12110 AC010620.1-201ENST00000601088 1102 ntBASIC6.76□□□□□ -1.33
COL6A2P12110 AC004908.1-201ENST00000606572 541 ntBASIC6.76□□□□□ -1.33
COL6A2P12110 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC6.76□□□□□ -1.33
COL6A2P12110 AC245100.7-201ENST00000609678 442 ntBASIC6.76□□□□□ -1.33
COL6A2P12110 PART1_2.1-201ENST00000612397 250 ntBASIC6.76□□□□□ -1.33
COL6A2P12110 AL161420.1-201ENST00000619393 264 ntBASIC6.76□□□□□ -1.33
COL6A2P12110 AP002782.1-201ENST00000623107 614 ntBASIC6.76□□□□□ -1.33
COL6A2P12110 ZRANB2-AS2-220ENST00000623721 1133 ntTSL 5 BASIC6.76□□□□□ -1.33
COL6A2P12110 AC110079.2-202ENST00000629093 698 ntTSL 3 BASIC6.76□□□□□ -1.33
COL6A2P12110 MIR3974-201ENST00000637126 96 ntBASIC6.76□□□□□ -1.33
COL6A2P12110 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
COL6A2P12110 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
COL6A2P12110 ZMYM4-201ENST00000314607 6994 ntAPPRIS P1 TSL 2 BASIC6.76□□□□□ -1.33
COL6A2P12110 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
COL6A2P12110 AC022306.1-201ENST00000560489 1562 ntBASIC6.76□□□□□ -1.33
COL6A2P12110 AL078595.2-201ENST00000605309 1780 ntBASIC6.76□□□□□ -1.33
COL6A2P12110 AC010168.2-201ENST00000562691 5428 ntBASIC6.76□□□□□ -1.33
COL6A2P12110 ALG10-201ENST00000266483 3128 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
COL6A2P12110 MAT2B-201ENST00000280969 2226 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
COL6A2P12110 AP002800.1-201ENST00000624982 2225 ntBASIC6.76□□□□□ -1.33
COL6A2P12110 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
COL6A2P12110 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
COL6A2P12110 AC102941.1-201ENST00000567616 1537 ntBASIC6.76□□□□□ -1.33
COL6A2P12110 DMD-211ENST00000378707 7410 ntTSL 5 BASIC6.76□□□□□ -1.33
COL6A2P12110 MFSD8-213ENST00000641134 1327 ntBASIC6.76□□□□□ -1.33
COL6A2P12110 ESRRG-212ENST00000463665 3359 ntTSL 2 BASIC6.75□□□□□ -1.33
COL6A2P12110 N4BP2-201ENST00000261435 9744 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
COL6A2P12110 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC6.75□□□□□ -1.33
COL6A2P12110 DTNA-201ENST00000269192 1964 ntTSL 2 BASIC6.75□□□□□ -1.33
COL6A2P12110 AC119674.1-202ENST00000641333 1860 ntBASIC6.75□□□□□ -1.33
COL6A2P12110 AC126474.2-201ENST00000623268 1750 ntBASIC6.75□□□□□ -1.33
COL6A2P12110 KIF1B-204ENST00000377086 10669 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
COL6A2P12110 ADK-201ENST00000286621 1169 ntAPPRIS P4 TSL 1 (best) BASIC6.75□□□□□ -1.33
COL6A2P12110 CCL20-202ENST00000409189 839 ntAPPRIS ALT1 TSL 1 (best) BASIC6.75□□□□□ -1.33
COL6A2P12110 RN7SKP188-201ENST00000410789 317 ntBASIC6.75□□□□□ -1.33
COL6A2P12110 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC6.75□□□□□ -1.33
COL6A2P12110 AL034345.2-202ENST00000416948 830 ntTSL 2 BASIC6.75□□□□□ -1.33
COL6A2P12110 AC008173.1-201ENST00000418901 264 ntBASIC6.75□□□□□ -1.33
COL6A2P12110 MTND2P18-201ENST00000419962 1030 ntBASIC6.75□□□□□ -1.33
COL6A2P12110 PMS2P3-203ENST00000422064 567 ntTSL 5 BASIC6.75□□□□□ -1.33
COL6A2P12110 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC6.75□□□□□ -1.33
COL6A2P12110 AL513303.1-201ENST00000432452 591 ntTSL 2 BASIC6.75□□□□□ -1.33
COL6A2P12110 MTCO3P5-201ENST00000433620 714 ntBASIC6.75□□□□□ -1.33
COL6A2P12110 GTF2A1-202ENST00000434192 1199 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
COL6A2P12110 ANXA2P2-201ENST00000435128 1020 ntBASIC6.75□□□□□ -1.33
COL6A2P12110 FGF13-AS1-201ENST00000438238 849 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
COL6A2P12110 AL354714.5-201ENST00000450131 590 ntBASIC6.75□□□□□ -1.33
COL6A2P12110 AC114755.1-201ENST00000453101 868 ntBASIC6.75□□□□□ -1.33
COL6A2P12110 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC6.75□□□□□ -1.33
COL6A2P12110 AL139156.3-201ENST00000454802 394 ntBASIC6.75□□□□□ -1.33
COL6A2P12110 UCK2-206ENST00000470820 1083 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
COL6A2P12110 AC074386.1-206ENST00000487102 761 ntBASIC6.75□□□□□ -1.33
COL6A2P12110 ZNF138-207ENST00000494380 842 ntTSL 2 BASIC6.75□□□□□ -1.33
COL6A2P12110 RN7SL143P-201ENST00000496780 297 ntBASIC6.75□□□□□ -1.33
COL6A2P12110 ENPP7P3-201ENST00000509123 241 ntBASIC6.75□□□□□ -1.33
COL6A2P12110 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC6.75□□□□□ -1.33
COL6A2P12110 AP003438.1-201ENST00000518704 435 ntTSL 3 BASIC6.75□□□□□ -1.33
COL6A2P12110 TPT1-AS1-206ENST00000519454 709 ntTSL 5 BASIC6.75□□□□□ -1.33
COL6A2P12110 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC6.75□□□□□ -1.33
COL6A2P12110 AC104009.1-201ENST00000528009 635 ntTSL 3 BASIC6.75□□□□□ -1.33
COL6A2P12110 REG4-204ENST00000530654 612 ntTSL 5 BASIC6.75□□□□□ -1.33
COL6A2P12110 AL356057.1-201ENST00000533798 831 ntBASIC6.75□□□□□ -1.33
COL6A2P12110 AP003717.3-201ENST00000544832 1180 ntBASIC6.75□□□□□ -1.33
COL6A2P12110 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC6.75□□□□□ -1.33
COL6A2P12110 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC6.75□□□□□ -1.33
COL6A2P12110 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC6.75□□□□□ -1.33
COL6A2P12110 ZNF971P-201ENST00000562068 1249 ntBASIC6.75□□□□□ -1.33
COL6A2P12110 AC068418.1-201ENST00000582990 404 ntTSL 3 BASIC6.75□□□□□ -1.33
COL6A2P12110 CBX3P2-202ENST00000583365 535 ntBASIC6.75□□□□□ -1.33
COL6A2P12110 AC010503.3-201ENST00000594355 540 ntBASIC6.75□□□□□ -1.33
COL6A2P12110 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC6.75□□□□□ -1.33
COL6A2P12110 AC010519.1-201ENST00000599924 344 ntTSL 5 BASIC6.75□□□□□ -1.33
COL6A2P12110 AC073137.1-201ENST00000605636 634 ntBASIC6.75□□□□□ -1.33
COL6A2P12110 AC092140.2-201ENST00000618027 521 ntBASIC6.75□□□□□ -1.33
COL6A2P12110 AC022079.2-201ENST00000619739 566 ntBASIC6.75□□□□□ -1.33
COL6A2P12110 LINC00251-201ENST00000627569 1055 ntTSL 3 BASIC6.75□□□□□ -1.33
COL6A2P12110 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC6.75□□□□□ -1.33
COL6A2P12110 ABLIM1-202ENST00000369252 7690 ntTSL 5 BASIC6.75□□□□□ -1.33
COL6A2P12110 LINC02197-201ENST00000502659 2767 ntTSL 2 BASIC6.75□□□□□ -1.33
COL6A2P12110 CEACAM1-207ENST00000403444 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
COL6A2P12110 LRRC37A12P-201ENST00000454917 1801 ntBASIC6.75□□□□□ -1.33
COL6A2P12110 MAPK10-287ENST00000641217 3037 ntBASIC6.75□□□□□ -1.33
COL6A2P12110 PHYHIPL-201ENST00000373878 3569 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
COL6A2P12110 C2CD6-203ENST00000439802 1639 ntAPPRIS ALT2 TSL 2 BASIC6.75□□□□□ -1.33
COL6A2P12110 ZC3H8-208ENST00000615791 1527 ntAPPRIS ALT2 TSL 5 BASIC6.75□□□□□ -1.33
COL6A2P12110 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
COL6A2P12110 IL5RA-209ENST00000446632 2514 ntAPPRIS P4 TSL 5 BASIC6.75□□□□□ -1.33
COL6A2P12110 AIG1-209ENST00000629020 3636 ntTSL 2 BASIC6.75□□□□□ -1.33
COL6A2P12110 SUCLA2P2-201ENST00000417269 1309 ntBASIC6.75□□□□□ -1.33
COL6A2P12110 ZNF542P-202ENST00000467807 3209 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
COL6A2P12110 AC007012.2-201ENST00000623206 1676 ntBASIC6.74□□□□□ -1.33
COL6A2P12110 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
COL6A2P12110 HRG-201ENST00000232003 2015 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
COL6A2P12110 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
COL6A2P12110 PDE1C-203ENST00000396184 8852 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms