Protein–RNA interactions for Protein: P12035

KRT3, Keratin, type II cytoskeletal 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT3P12035 CCNB1IP1P1-201ENST00000428976 839 ntBASIC6.4□□□□□ -1.38
KRT3P12035 DNAJC19P5-201ENST00000443295 316 ntBASIC6.4□□□□□ -1.38
KRT3P12035 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC6.4□□□□□ -1.38
KRT3P12035 RBMY2BP-202ENST00000451071 1156 ntBASIC6.4□□□□□ -1.38
KRT3P12035 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC6.4□□□□□ -1.38
KRT3P12035 PPP1R11P1-201ENST00000486095 376 ntBASIC6.4□□□□□ -1.38
KRT3P12035 RPL23AP40-201ENST00000487630 390 ntBASIC6.4□□□□□ -1.38
KRT3P12035 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC6.4□□□□□ -1.38
KRT3P12035 GTF2IP11-201ENST00000526931 420 ntBASIC6.4□□□□□ -1.38
KRT3P12035 OLR1-210ENST00000544577 924 ntTSL 5 BASIC6.4□□□□□ -1.38
KRT3P12035 AC023310.2-201ENST00000553844 547 ntBASIC6.4□□□□□ -1.38
KRT3P12035 AC004232.2-201ENST00000574245 821 ntBASIC6.4□□□□□ -1.38
KRT3P12035 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC6.4□□□□□ -1.38
KRT3P12035 AC138207.8-204ENST00000579588 527 ntBASIC6.4□□□□□ -1.38
KRT3P12035 SMIM12P1-201ENST00000603004 274 ntBASIC6.4□□□□□ -1.38
KRT3P12035 AC005828.7-201ENST00000607331 556 ntBASIC6.4□□□□□ -1.38
KRT3P12035 Metazoa_SRP.207-201ENST00000612254 285 ntBASIC6.4□□□□□ -1.38
KRT3P12035 AL138960.1-201ENST00000613838 513 ntBASIC6.4□□□□□ -1.38
KRT3P12035 RFPL4AP6-201ENST00000616792 846 ntBASIC6.4□□□□□ -1.38
KRT3P12035 AL109924.4-201ENST00000623089 670 ntBASIC6.4□□□□□ -1.38
KRT3P12035 AC009950.2-201ENST00000636548 183 ntBASIC6.4□□□□□ -1.38
KRT3P12035 AC099654.15-201ENST00000639802 509 ntBASIC6.4□□□□□ -1.38
KRT3P12035 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
KRT3P12035 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
KRT3P12035 AC016583.1-201ENST00000624221 2431 ntBASIC6.4□□□□□ -1.39
KRT3P12035 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC6.4□□□□□ -1.39
KRT3P12035 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
KRT3P12035 DYNC2LI1-201ENST00000260605 1399 ntAPPRIS P3 TSL 1 (best) BASIC6.4□□□□□ -1.39
KRT3P12035 AC114876.1-201ENST00000490962 1366 ntBASIC6.4□□□□□ -1.39
KRT3P12035 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC6.4□□□□□ -1.39
KRT3P12035 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
KRT3P12035 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
KRT3P12035 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
KRT3P12035 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
KRT3P12035 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
KRT3P12035 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
KRT3P12035 NCOA4P2-201ENST00000340589 1813 ntBASIC6.39□□□□□ -1.39
KRT3P12035 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
KRT3P12035 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC6.39□□□□□ -1.39
KRT3P12035 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC6.39□□□□□ -1.39
KRT3P12035 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC6.39□□□□□ -1.39
KRT3P12035 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
KRT3P12035 RNA5SP110-201ENST00000362638 115 ntBASIC6.39□□□□□ -1.39
KRT3P12035 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC6.39□□□□□ -1.39
KRT3P12035 AL359885.1-201ENST00000415786 903 ntBASIC6.39□□□□□ -1.39
KRT3P12035 AL049712.1-201ENST00000418739 872 ntTSL 3 BASIC6.39□□□□□ -1.39
KRT3P12035 AL445224.1-201ENST00000420595 737 ntTSL 5 BASIC6.39□□□□□ -1.39
KRT3P12035 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC6.39□□□□□ -1.39
KRT3P12035 AL139158.1-201ENST00000424719 340 ntBASIC6.39□□□□□ -1.39
KRT3P12035 AC108479.1-201ENST00000431142 427 ntBASIC6.39□□□□□ -1.39
KRT3P12035 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC6.39□□□□□ -1.39
KRT3P12035 GAPDHP59-201ENST00000435908 267 ntBASIC6.39□□□□□ -1.39
KRT3P12035 AC002553.3-201ENST00000453002 341 ntBASIC6.39□□□□□ -1.39
KRT3P12035 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC6.39□□□□□ -1.39
KRT3P12035 AC124945.1-201ENST00000485133 188 ntBASIC6.39□□□□□ -1.39
KRT3P12035 RABGAP1L-216ENST00000486220 772 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
KRT3P12035 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC6.39□□□□□ -1.39
KRT3P12035 AC112484.3-201ENST00000505910 329 ntBASIC6.39□□□□□ -1.39
KRT3P12035 AC111000.5-201ENST00000506559 1178 ntBASIC6.39□□□□□ -1.39
KRT3P12035 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC6.39□□□□□ -1.39
KRT3P12035 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC6.39□□□□□ -1.39
KRT3P12035 AL132989.1-201ENST00000557322 576 ntTSL 3 BASIC6.39□□□□□ -1.39
KRT3P12035 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC6.39□□□□□ -1.39
KRT3P12035 MRPS21P8-201ENST00000569196 235 ntBASIC6.39□□□□□ -1.39
KRT3P12035 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC6.39□□□□□ -1.39
KRT3P12035 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
KRT3P12035 uc_338.31-201ENST00000615595 186 ntBASIC6.39□□□□□ -1.39
KRT3P12035 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC6.39□□□□□ -1.39
KRT3P12035 AC073488.6-201ENST00000632293 754 ntBASIC6.39□□□□□ -1.39
KRT3P12035 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
KRT3P12035 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC6.39□□□□□ -1.39
KRT3P12035 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC6.39□□□□□ -1.39
KRT3P12035 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
KRT3P12035 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC6.39□□□□□ -1.39
KRT3P12035 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC6.39□□□□□ -1.39
KRT3P12035 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC6.39□□□□□ -1.39
KRT3P12035 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
KRT3P12035 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
KRT3P12035 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC6.39□□□□□ -1.39
KRT3P12035 AC022164.1-201ENST00000568767 2673 ntBASIC6.39□□□□□ -1.39
KRT3P12035 AC027575.3-201ENST00000583058 2747 ntBASIC6.39□□□□□ -1.39
KRT3P12035 AC119674.1-202ENST00000641333 1860 ntBASIC6.39□□□□□ -1.39
KRT3P12035 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC6.38□□□□□ -1.39
KRT3P12035 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
KRT3P12035 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
KRT3P12035 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC6.38□□□□□ -1.39
KRT3P12035 MATR3-203ENST00000502499 2664 ntTSL 5 BASIC6.38□□□□□ -1.39
KRT3P12035 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
KRT3P12035 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
KRT3P12035 RNA5-8SP5-201ENST00000365304 152 ntBASIC6.38□□□□□ -1.39
KRT3P12035 SNORA77.2-201ENST00000408571 112 ntBASIC6.38□□□□□ -1.39
KRT3P12035 AC130360.1-201ENST00000425489 1117 ntBASIC6.38□□□□□ -1.39
KRT3P12035 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC6.38□□□□□ -1.39
KRT3P12035 AC024601.1-201ENST00000427247 524 ntTSL 3 BASIC6.38□□□□□ -1.39
KRT3P12035 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC6.38□□□□□ -1.39
KRT3P12035 AC096632.2-201ENST00000438139 1239 ntBASIC6.38□□□□□ -1.39
KRT3P12035 SEPT14P12-201ENST00000442280 560 ntBASIC6.38□□□□□ -1.39
KRT3P12035 CCDC11P1-201ENST00000503137 1162 ntBASIC6.38□□□□□ -1.39
KRT3P12035 AC022140.1-201ENST00000511029 565 ntTSL 3 BASIC6.38□□□□□ -1.39
KRT3P12035 MAST4-IT1-201ENST00000514241 658 ntBASIC6.38□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 70.1 ms