Protein–RNA interactions for Protein: P02538

KRT6A, Keratin, type II cytoskeletal 6A, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6AP02538 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC5.95□□□□□ -1.46
KRT6AP02538 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
KRT6AP02538 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
KRT6AP02538 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC5.95□□□□□ -1.46
KRT6AP02538 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
KRT6AP02538 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC5.94□□□□□ -1.46
KRT6AP02538 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
KRT6AP02538 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
KRT6AP02538 AC092070.2-203ENST00000598377 3644 ntBASIC5.94□□□□□ -1.46
KRT6AP02538 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
KRT6AP02538 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC5.94□□□□□ -1.46
KRT6AP02538 ZNF101P1-201ENST00000435701 1720 ntBASIC5.94□□□□□ -1.46
KRT6AP02538 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
KRT6AP02538 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.94□□□□□ -1.46
KRT6AP02538 SELE-204ENST00000367776 3576 ntTSL 5 BASIC5.94□□□□□ -1.46
KRT6AP02538 SELE-205ENST00000367777 3576 ntTSL 5 BASIC5.94□□□□□ -1.46
KRT6AP02538 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.94□□□□□ -1.46
KRT6AP02538 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC5.94□□□□□ -1.46
KRT6AP02538 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.94□□□□□ -1.46
KRT6AP02538 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
KRT6AP02538 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
KRT6AP02538 SNORD1C-201ENST00000363315 78 ntBASIC5.94□□□□□ -1.46
KRT6AP02538 RNA5SP346-201ENST00000363541 121 ntBASIC5.94□□□□□ -1.46
KRT6AP02538 TRAV35-201ENST00000390462 330 ntBASIC5.94□□□□□ -1.46
KRT6AP02538 YWHAZP4-201ENST00000392459 708 ntBASIC5.94□□□□□ -1.46
KRT6AP02538 AL138828.1-204ENST00000413745 898 ntTSL 5 BASIC5.94□□□□□ -1.46
KRT6AP02538 AC017078.1-201ENST00000416146 368 ntBASIC5.94□□□□□ -1.46
KRT6AP02538 AP006748.1-201ENST00000418874 346 ntTSL 3 BASIC5.94□□□□□ -1.46
KRT6AP02538 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
KRT6AP02538 AL365220.1-201ENST00000432923 399 ntBASIC5.94□□□□□ -1.46
KRT6AP02538 CXCR2P1-202ENST00000443392 1074 ntBASIC5.94□□□□□ -1.46
KRT6AP02538 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
KRT6AP02538 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC5.94□□□□□ -1.46
KRT6AP02538 Y_RNA.710-201ENST00000516975 110 ntBASIC5.94□□□□□ -1.46
KRT6AP02538 TPM3P3-201ENST00000521343 354 ntBASIC5.94□□□□□ -1.46
KRT6AP02538 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC5.94□□□□□ -1.46
KRT6AP02538 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC5.94□□□□□ -1.46
KRT6AP02538 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC5.94□□□□□ -1.46
KRT6AP02538 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC5.94□□□□□ -1.46
KRT6AP02538 TXNP4-201ENST00000575018 310 ntBASIC5.94□□□□□ -1.46
KRT6AP02538 MIR132-201ENST00000591554 101 ntBASIC5.94□□□□□ -1.46
KRT6AP02538 AL589740.1-209ENST00000607032 1056 ntTSL 3 BASIC5.94□□□□□ -1.46
KRT6AP02538 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC5.94□□□□□ -1.46
KRT6AP02538 AL353684.1-201ENST00000622677 1120 ntBASIC5.94□□□□□ -1.46
KRT6AP02538 AL161457.2-202ENST00000629161 743 ntTSL 5 BASIC5.94□□□□□ -1.46
KRT6AP02538 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC5.94□□□□□ -1.46
KRT6AP02538 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC5.94□□□□□ -1.46
KRT6AP02538 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC5.94□□□□□ -1.46
KRT6AP02538 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC5.94□□□□□ -1.46
KRT6AP02538 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
KRT6AP02538 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
KRT6AP02538 PLN-201ENST00000357525 2001 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
KRT6AP02538 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC5.94□□□□□ -1.46
KRT6AP02538 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
KRT6AP02538 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC5.94□□□□□ -1.46
KRT6AP02538 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC5.94□□□□□ -1.46
KRT6AP02538 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC5.94□□□□□ -1.46
KRT6AP02538 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
KRT6AP02538 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
KRT6AP02538 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
KRT6AP02538 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC5.93□□□□□ -1.46
KRT6AP02538 LIPF-201ENST00000238983 1376 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
KRT6AP02538 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.93□□□□□ -1.46
KRT6AP02538 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
KRT6AP02538 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
KRT6AP02538 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
KRT6AP02538 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
KRT6AP02538 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC5.93□□□□□ -1.46
KRT6AP02538 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
KRT6AP02538 OR5B21-201ENST00000360374 931 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
KRT6AP02538 GNG5P2-201ENST00000372054 207 ntBASIC5.93□□□□□ -1.46
KRT6AP02538 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
KRT6AP02538 PRELID1P1-201ENST00000403549 660 ntBASIC5.93□□□□□ -1.46
KRT6AP02538 RN7SKP144-201ENST00000411108 279 ntBASIC5.93□□□□□ -1.46
KRT6AP02538 AC005162.1-201ENST00000416513 389 ntTSL 5 BASIC5.93□□□□□ -1.46
KRT6AP02538 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC5.93□□□□□ -1.46
KRT6AP02538 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC5.93□□□□□ -1.46
KRT6AP02538 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC5.93□□□□□ -1.46
KRT6AP02538 AC005008.2-201ENST00000431501 715 ntTSL 3 BASIC5.93□□□□□ -1.46
KRT6AP02538 IGLV3-4-201ENST00000432300 244 ntBASIC5.93□□□□□ -1.46
KRT6AP02538 AL022324.2-201ENST00000434827 780 ntBASIC5.93□□□□□ -1.46
KRT6AP02538 MAGI2-AS3-210ENST00000448636 798 ntTSL 5 BASIC5.93□□□□□ -1.46
KRT6AP02538 HIGD1AP16-201ENST00000450986 258 ntBASIC5.93□□□□□ -1.46
KRT6AP02538 AC147651.1-201ENST00000453149 572 ntTSL 2 BASIC5.93□□□□□ -1.46
KRT6AP02538 AL133351.3-201ENST00000454998 193 ntBASIC5.93□□□□□ -1.46
KRT6AP02538 RN7SL104P-201ENST00000498686 293 ntBASIC5.93□□□□□ -1.46
KRT6AP02538 AC093535.1-203ENST00000512500 730 ntTSL 3 BASIC5.93□□□□□ -1.46
KRT6AP02538 AC108063.1-201ENST00000513586 414 ntTSL 3 BASIC5.93□□□□□ -1.46
KRT6AP02538 RNA5SP206-201ENST00000516703 121 ntBASIC5.93□□□□□ -1.46
KRT6AP02538 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
KRT6AP02538 CRYAB-205ENST00000526180 1017 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
KRT6AP02538 AC008056.2-201ENST00000553812 551 ntTSL 5 BASIC5.93□□□□□ -1.46
KRT6AP02538 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC5.93□□□□□ -1.46
KRT6AP02538 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC5.93□□□□□ -1.46
KRT6AP02538 AC008555.7-201ENST00000605008 583 ntBASIC5.93□□□□□ -1.46
KRT6AP02538 AL591167.1-201ENST00000607321 456 ntBASIC5.93□□□□□ -1.46
KRT6AP02538 AL589935.2-201ENST00000616471 1231 ntBASIC5.93□□□□□ -1.46
KRT6AP02538 TEX41-279ENST00000629149 609 ntTSL 5 BASIC5.93□□□□□ -1.46
KRT6AP02538 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
KRT6AP02538 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC5.93□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 156.7 ms