Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.09□□□□□ -1.59
UPK1BO75841 CTXN3-201ENST00000379445 1660 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
UPK1BO75841 BMP10-201ENST00000295379 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
UPK1BO75841 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC5.09□□□□□ -1.59
UPK1BO75841 QRSL1P3-201ENST00000552666 1316 ntBASIC5.09□□□□□ -1.59
UPK1BO75841 IFNA7-201ENST00000239347 737 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
UPK1BO75841 BTF3-201ENST00000335895 897 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
UPK1BO75841 AC068389.3-201ENST00000373384 529 ntTSL 4 BASIC5.09□□□□□ -1.59
UPK1BO75841 AL024497.1-201ENST00000412954 631 ntTSL 5 BASIC5.09□□□□□ -1.59
UPK1BO75841 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC5.09□□□□□ -1.59
UPK1BO75841 IFNA4-201ENST00000421715 978 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
UPK1BO75841 RPS7P14-201ENST00000426405 583 ntBASIC5.09□□□□□ -1.59
UPK1BO75841 VN1R21P-201ENST00000426703 765 ntBASIC5.09□□□□□ -1.59
UPK1BO75841 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC5.09□□□□□ -1.59
UPK1BO75841 LRRC23-208ENST00000436789 796 ntTSL 3 BASIC5.09□□□□□ -1.59
UPK1BO75841 SRP68P2-201ENST00000456184 254 ntBASIC5.09□□□□□ -1.59
UPK1BO75841 AC016822.1-201ENST00000457975 439 ntTSL 3 BASIC5.09□□□□□ -1.59
UPK1BO75841 RN7SKP198-201ENST00000459286 306 ntBASIC5.09□□□□□ -1.59
UPK1BO75841 AC021660.1-201ENST00000465006 554 ntBASIC5.09□□□□□ -1.59
UPK1BO75841 OR7E22P-201ENST00000478335 1035 ntBASIC5.09□□□□□ -1.59
UPK1BO75841 CREM-238ENST00000488741 651 ntTSL 2 BASIC5.09□□□□□ -1.59
UPK1BO75841 AC117386.2-203ENST00000489690 557 ntTSL 3 BASIC5.09□□□□□ -1.59
UPK1BO75841 AC109588.1-201ENST00000507759 726 ntTSL 3 BASIC5.09□□□□□ -1.59
UPK1BO75841 ENPP7P3-201ENST00000509123 241 ntBASIC5.09□□□□□ -1.59
UPK1BO75841 AC092336.1-201ENST00000510562 415 ntTSL 3 BASIC5.09□□□□□ -1.59
UPK1BO75841 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC5.09□□□□□ -1.59
UPK1BO75841 AC006205.2-201ENST00000538943 373 ntTSL 2 BASIC5.09□□□□□ -1.59
UPK1BO75841 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC5.09□□□□□ -1.59
UPK1BO75841 AC026956.1-201ENST00000558741 396 ntBASIC5.09□□□□□ -1.59
UPK1BO75841 USP3-AS1-204ENST00000559861 620 ntTSL 5 BASIC5.09□□□□□ -1.59
UPK1BO75841 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC5.09□□□□□ -1.59
UPK1BO75841 AC104117.5-201ENST00000606195 547 ntBASIC5.09□□□□□ -1.59
UPK1BO75841 AL591167.1-201ENST00000607321 456 ntBASIC5.09□□□□□ -1.59
UPK1BO75841 AL596325.2-201ENST00000609669 505 ntTSL 3 BASIC5.09□□□□□ -1.59
UPK1BO75841 Z95327.3-201ENST00000610385 572 ntBASIC5.09□□□□□ -1.59
UPK1BO75841 AC239809.3-218ENST00000616018 1023 ntTSL 5 BASIC5.09□□□□□ -1.59
UPK1BO75841 RNASE11-211ENST00000620912 883 ntAPPRIS P2 TSL 1 (best) BASIC5.09□□□□□ -1.59
UPK1BO75841 PGAM1P5-203ENST00000626376 313 ntTSL 5 BASIC5.09□□□□□ -1.59
UPK1BO75841 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC5.09□□□□□ -1.59
UPK1BO75841 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC5.09□□□□□ -1.59
UPK1BO75841 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC5.09□□□□□ -1.59
UPK1BO75841 PTPRD-AS1-201ENST00000430766 1959 ntTSL 2 BASIC5.09□□□□□ -1.6
UPK1BO75841 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.6
UPK1BO75841 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
UPK1BO75841 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
UPK1BO75841 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC5.08□□□□□ -1.6
UPK1BO75841 HYKK-205ENST00000566332 1422 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
UPK1BO75841 AP001642.1-201ENST00000624727 2117 ntBASIC5.08□□□□□ -1.6
UPK1BO75841 MS4A6A-213ENST00000530839 1383 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
UPK1BO75841 PLEKHA5-216ENST00000540972 1954 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
UPK1BO75841 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.08□□□□□ -1.6
UPK1BO75841 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
UPK1BO75841 RNA5SP211-201ENST00000365516 117 ntBASIC5.08□□□□□ -1.6
UPK1BO75841 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
UPK1BO75841 TINAG-202ENST00000370864 692 ntTSL 2 BASIC5.08□□□□□ -1.6
UPK1BO75841 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC5.08□□□□□ -1.6
UPK1BO75841 U3.52-201ENST00000384034 216 ntBASIC5.08□□□□□ -1.6
UPK1BO75841 RNA5SP241-201ENST00000391326 114 ntBASIC5.08□□□□□ -1.6
UPK1BO75841 A2ML1-AS2-201ENST00000394240 386 ntTSL 5 BASIC5.08□□□□□ -1.6
UPK1BO75841 PDCL3P5-201ENST00000398028 722 ntBASIC5.08□□□□□ -1.6
UPK1BO75841 AC096921.1-201ENST00000411661 375 ntBASIC5.08□□□□□ -1.6
UPK1BO75841 AL391811.1-201ENST00000416908 423 ntTSL 3 BASIC5.08□□□□□ -1.6
UPK1BO75841 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC5.08□□□□□ -1.6
UPK1BO75841 ETDB-202ENST00000426364 388 ntAPPRIS P1 TSL 3 BASIC5.08□□□□□ -1.6
UPK1BO75841 ETDA-201ENST00000427686 607 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
UPK1BO75841 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC5.08□□□□□ -1.6
UPK1BO75841 CCNB1IP1P1-201ENST00000428976 839 ntBASIC5.08□□□□□ -1.6
UPK1BO75841 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC5.08□□□□□ -1.6
UPK1BO75841 FAF2P1-201ENST00000429974 1298 ntBASIC5.08□□□□□ -1.6
UPK1BO75841 LINC00869-202ENST00000430442 1065 ntTSL 5 BASIC5.08□□□□□ -1.6
UPK1BO75841 AL139231.1-201ENST00000431001 312 ntTSL 3 BASIC5.08□□□□□ -1.6
UPK1BO75841 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
UPK1BO75841 PSMD8P1-201ENST00000436275 769 ntBASIC5.08□□□□□ -1.6
UPK1BO75841 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC5.08□□□□□ -1.6
UPK1BO75841 PPIAP10-201ENST00000438675 458 ntBASIC5.08□□□□□ -1.6
UPK1BO75841 AC092568.1-201ENST00000440950 1284 ntBASIC5.08□□□□□ -1.6
UPK1BO75841 LINC01781-202ENST00000443104 591 ntTSL 2 BASIC5.08□□□□□ -1.6
UPK1BO75841 AC073909.1-201ENST00000447112 999 ntBASIC5.08□□□□□ -1.6
UPK1BO75841 LIX1L-AS1-206ENST00000447686 846 ntTSL 2 BASIC5.08□□□□□ -1.6
UPK1BO75841 AC092421.1-201ENST00000448148 418 ntBASIC5.08□□□□□ -1.6
UPK1BO75841 ETDA-202ENST00000454551 388 ntAPPRIS P1 TSL 3 BASIC5.08□□□□□ -1.6
UPK1BO75841 AC245028.2-201ENST00000458673 253 ntBASIC5.08□□□□□ -1.6
UPK1BO75841 RN7SL643P-201ENST00000471845 291 ntBASIC5.08□□□□□ -1.6
UPK1BO75841 RN7SL326P-201ENST00000477493 296 ntBASIC5.08□□□□□ -1.6
UPK1BO75841 AC107029.1-201ENST00000484675 465 ntTSL 2 BASIC5.08□□□□□ -1.6
UPK1BO75841 MYL12BP2-201ENST00000503948 512 ntBASIC5.08□□□□□ -1.6
UPK1BO75841 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC5.08□□□□□ -1.6
UPK1BO75841 PTPN20-219ENST00000508602 742 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
UPK1BO75841 PTPN20-221ENST00000509599 945 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
UPK1BO75841 PTPN20-223ENST00000509900 693 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
UPK1BO75841 SPINK13-202ENST00000511106 661 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
UPK1BO75841 PTPN20-228ENST00000513266 818 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
UPK1BO75841 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC5.08□□□□□ -1.6
UPK1BO75841 MIR2117-201ENST00000516780 80 ntBASIC5.08□□□□□ -1.6
UPK1BO75841 IGHVII-51-2-201ENST00000519778 259 ntBASIC5.08□□□□□ -1.6
UPK1BO75841 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC5.08□□□□□ -1.6
UPK1BO75841 OR7E158P-201ENST00000524483 910 ntBASIC5.08□□□□□ -1.6
UPK1BO75841 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC5.08□□□□□ -1.6
UPK1BO75841 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC5.08□□□□□ -1.6
UPK1BO75841 AC023968.1-201ENST00000560719 475 ntBASIC5.08□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms