Protein–RNA interactions for Protein: O60902

SHOX2, Short stature homeobox protein 2, humanhuman

Predicted RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2O60902 FECHP1-201ENST00000431896 1214 ntBASIC6.02□□□□□ -1.45
SHOX2O60902 AC016582.1-203ENST00000433142 502 ntTSL 3 BASIC6.02□□□□□ -1.45
SHOX2O60902 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
SHOX2O60902 SEPHS1P4-201ENST00000446112 1176 ntBASIC6.02□□□□□ -1.45
SHOX2O60902 YRDCP3-201ENST00000456507 480 ntBASIC6.02□□□□□ -1.45
SHOX2O60902 RN7SL714P-201ENST00000487050 298 ntBASIC6.02□□□□□ -1.45
SHOX2O60902 B3GNTL1P1-201ENST00000509174 289 ntBASIC6.02□□□□□ -1.45
SHOX2O60902 OR51A1P-201ENST00000511110 946 ntBASIC6.02□□□□□ -1.45
SHOX2O60902 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC6.02□□□□□ -1.45
SHOX2O60902 RNA5SP96-201ENST00000516041 107 ntBASIC6.02□□□□□ -1.45
SHOX2O60902 C8orf37-AS1-201ENST00000517437 456 ntTSL 3 BASIC6.02□□□□□ -1.45
SHOX2O60902 AC105150.1-201ENST00000518011 551 ntTSL 3 BASIC6.02□□□□□ -1.45
SHOX2O60902 CARSP2-201ENST00000520688 277 ntBASIC6.02□□□□□ -1.45
SHOX2O60902 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC6.02□□□□□ -1.45
SHOX2O60902 TMEM126B-211ENST00000534341 1273 ntTSL 2 BASIC6.02□□□□□ -1.45
SHOX2O60902 AC073896.2-202ENST00000549860 437 ntTSL 2 BASIC6.02□□□□□ -1.45
SHOX2O60902 AC084782.2-201ENST00000561934 839 ntTSL 3 BASIC6.02□□□□□ -1.45
SHOX2O60902 LINC00907-202ENST00000585639 915 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
SHOX2O60902 COX6CP7-201ENST00000597056 208 ntBASIC6.02□□□□□ -1.45
SHOX2O60902 AC010632.3-201ENST00000611377 369 ntBASIC6.02□□□□□ -1.45
SHOX2O60902 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
SHOX2O60902 DDX6-207ENST00000617381 2883 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
SHOX2O60902 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
SHOX2O60902 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
SHOX2O60902 BCORP1-203ENST00000513194 5093 ntBASIC6.02□□□□□ -1.45
SHOX2O60902 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
SHOX2O60902 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
SHOX2O60902 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
SHOX2O60902 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
SHOX2O60902 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC6.01□□□□□ -1.45
SHOX2O60902 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
SHOX2O60902 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC6.01□□□□□ -1.45
SHOX2O60902 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
SHOX2O60902 RN7SKP130-201ENST00000364924 301 ntBASIC6.01□□□□□ -1.45
SHOX2O60902 AC024937.2-201ENST00000411669 1242 ntBASIC6.01□□□□□ -1.45
SHOX2O60902 SETP22-201ENST00000412243 957 ntBASIC6.01□□□□□ -1.45
SHOX2O60902 CYTOR-207ENST00000414584 772 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
SHOX2O60902 AC000089.1-201ENST00000424559 801 ntBASIC6.01□□□□□ -1.45
SHOX2O60902 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC6.01□□□□□ -1.45
SHOX2O60902 FGF12-202ENST00000430714 603 ntTSL 2 BASIC6.01□□□□□ -1.45
SHOX2O60902 AC019211.1-201ENST00000432993 754 ntTSL 3 BASIC6.01□□□□□ -1.45
SHOX2O60902 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC6.01□□□□□ -1.45
SHOX2O60902 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC6.01□□□□□ -1.45
SHOX2O60902 LINC01449-201ENST00000440213 1220 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
SHOX2O60902 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC6.01□□□□□ -1.45
SHOX2O60902 AL512593.1-201ENST00000444758 779 ntBASIC6.01□□□□□ -1.45
SHOX2O60902 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
SHOX2O60902 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
SHOX2O60902 RN7SL868P-201ENST00000485915 303 ntBASIC6.01□□□□□ -1.45
SHOX2O60902 AC010655.2-201ENST00000493710 662 ntTSL 3 BASIC6.01□□□□□ -1.45
SHOX2O60902 VPS37A-208ENST00000521005 479 ntTSL 3 BASIC6.01□□□□□ -1.45
SHOX2O60902 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC6.01□□□□□ -1.45
SHOX2O60902 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC6.01□□□□□ -1.45
SHOX2O60902 AC026956.1-201ENST00000558741 396 ntBASIC6.01□□□□□ -1.45
SHOX2O60902 ZNF790-AS1-201ENST00000587278 653 ntTSL 5 BASIC6.01□□□□□ -1.45
SHOX2O60902 AC004805.3-201ENST00000603178 310 ntBASIC6.01□□□□□ -1.45
SHOX2O60902 AMYH02020865.1-207ENST00000617096 458 ntTSL 3 BASIC6.01□□□□□ -1.45
SHOX2O60902 AL121985.3-201ENST00000620690 523 ntBASIC6.01□□□□□ -1.45
SHOX2O60902 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
SHOX2O60902 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC6.01□□□□□ -1.45
SHOX2O60902 AC073136.1-201ENST00000449426 2884 ntBASIC6.01□□□□□ -1.45
SHOX2O60902 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
SHOX2O60902 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC6.01□□□□□ -1.45
SHOX2O60902 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC6.01□□□□□ -1.45
SHOX2O60902 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
SHOX2O60902 SLC2A3P4-201ENST00000521259 1471 ntBASIC6.01□□□□□ -1.45
SHOX2O60902 AC004014.2-201ENST00000623718 5122 ntBASIC6.01□□□□□ -1.45
SHOX2O60902 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
SHOX2O60902 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC6□□□□□ -1.45
SHOX2O60902 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
SHOX2O60902 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC6□□□□□ -1.45
SHOX2O60902 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC6□□□□□ -1.45
SHOX2O60902 RBPJP6-201ENST00000411556 1431 ntBASIC6□□□□□ -1.45
SHOX2O60902 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC6□□□□□ -1.45
SHOX2O60902 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC6□□□□□ -1.45
SHOX2O60902 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC6□□□□□ -1.45
SHOX2O60902 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC6□□□□□ -1.45
SHOX2O60902 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
SHOX2O60902 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC6□□□□□ -1.45
SHOX2O60902 RNA5SP152-201ENST00000365184 110 ntBASIC6□□□□□ -1.45
SHOX2O60902 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC6□□□□□ -1.45
SHOX2O60902 TINAG-202ENST00000370864 692 ntTSL 2 BASIC6□□□□□ -1.45
SHOX2O60902 IGKC-201ENST00000390237 523 ntAPPRIS P1 BASIC6□□□□□ -1.45
SHOX2O60902 RNU1-56P-201ENST00000391303 164 ntBASIC6□□□□□ -1.45
SHOX2O60902 TOMM6-202ENST00000398884 637 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
SHOX2O60902 SOD1P1-201ENST00000407803 440 ntBASIC6□□□□□ -1.45
SHOX2O60902 AC016769.2-201ENST00000414815 475 ntBASIC6□□□□□ -1.45
SHOX2O60902 AC002069.1-201ENST00000429649 1159 ntBASIC6□□□□□ -1.45
SHOX2O60902 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC6□□□□□ -1.45
SHOX2O60902 AC239800.1-201ENST00000442049 719 ntBASIC6□□□□□ -1.45
SHOX2O60902 AC004470.1-201ENST00000442155 382 ntTSL 5 BASIC6□□□□□ -1.45
SHOX2O60902 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC6□□□□□ -1.45
SHOX2O60902 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
SHOX2O60902 ENPP7P11-201ENST00000505915 627 ntBASIC6□□□□□ -1.45
SHOX2O60902 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC6□□□□□ -1.45
SHOX2O60902 AC116345.3-201ENST00000508255 449 ntTSL 3 BASIC6□□□□□ -1.45
SHOX2O60902 LIAS-205ENST00000509519 1005 ntTSL 2 BASIC6□□□□□ -1.45
SHOX2O60902 RN7SKP242-201ENST00000515967 289 ntBASIC6□□□□□ -1.45
SHOX2O60902 RNU4ATAC18P-201ENST00000516179 126 ntBASIC6□□□□□ -1.45
SHOX2O60902 IGKV1D-32-201ENST00000517449 318 ntBASIC6□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms