Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC5.64□□□□□ -1.51
ZIC3O60481 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
ZIC3O60481 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC5.64□□□□□ -1.51
ZIC3O60481 OR11H13P-201ENST00000359695 979 ntBASIC5.64□□□□□ -1.51
ZIC3O60481 RNU6-618P-201ENST00000363518 112 ntBASIC5.64□□□□□ -1.51
ZIC3O60481 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
ZIC3O60481 CXADRP1-201ENST00000398098 1095 ntBASIC5.64□□□□□ -1.51
ZIC3O60481 SMARCE1P6-201ENST00000398372 1216 ntBASIC5.64□□□□□ -1.51
ZIC3O60481 RNA5SP431-201ENST00000410312 120 ntBASIC5.64□□□□□ -1.51
ZIC3O60481 RN7SKP144-201ENST00000411108 279 ntBASIC5.64□□□□□ -1.51
ZIC3O60481 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC5.64□□□□□ -1.51
ZIC3O60481 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC5.64□□□□□ -1.51
ZIC3O60481 AC017019.1-201ENST00000426129 261 ntBASIC5.64□□□□□ -1.51
ZIC3O60481 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC5.64□□□□□ -1.51
ZIC3O60481 IGLV3-4-201ENST00000432300 244 ntBASIC5.64□□□□□ -1.51
ZIC3O60481 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC5.64□□□□□ -1.51
ZIC3O60481 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC5.64□□□□□ -1.51
ZIC3O60481 RN7SL170P-201ENST00000487098 295 ntBASIC5.64□□□□□ -1.51
ZIC3O60481 AC009879.1-201ENST00000520029 839 ntBASIC5.64□□□□□ -1.51
ZIC3O60481 NOX4-213ENST00000531342 696 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
ZIC3O60481 AC006512.2-201ENST00000543250 486 ntBASIC5.64□□□□□ -1.51
ZIC3O60481 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC5.64□□□□□ -1.51
ZIC3O60481 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC5.64□□□□□ -1.51
ZIC3O60481 MTND2P17-201ENST00000550281 688 ntBASIC5.64□□□□□ -1.51
ZIC3O60481 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC5.64□□□□□ -1.51
ZIC3O60481 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC5.64□□□□□ -1.51
ZIC3O60481 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC5.64□□□□□ -1.51
ZIC3O60481 MRPS21P8-201ENST00000569196 235 ntBASIC5.64□□□□□ -1.51
ZIC3O60481 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC5.64□□□□□ -1.51
ZIC3O60481 MIR3189-201ENST00000578735 73 ntBASIC5.64□□□□□ -1.51
ZIC3O60481 LINC01841-201ENST00000586698 573 ntTSL 4 BASIC5.64□□□□□ -1.51
ZIC3O60481 AC107993.1-201ENST00000591343 684 ntBASIC5.64□□□□□ -1.51
ZIC3O60481 AP001823.1-201ENST00000604056 1003 ntBASIC5.64□□□□□ -1.51
ZIC3O60481 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC5.64□□□□□ -1.51
ZIC3O60481 AC022106.1-201ENST00000612834 766 ntBASIC5.64□□□□□ -1.51
ZIC3O60481 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC5.64□□□□□ -1.51
ZIC3O60481 CXADRP3-202ENST00000617265 1100 ntBASIC5.64□□□□□ -1.51
ZIC3O60481 AC006453.5-201ENST00000636451 619 ntBASIC5.64□□□□□ -1.51
ZIC3O60481 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC5.64□□□□□ -1.51
ZIC3O60481 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC5.64□□□□□ -1.51
ZIC3O60481 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
ZIC3O60481 AC007406.5-201ENST00000570140 3170 ntBASIC5.64□□□□□ -1.51
ZIC3O60481 SLAMF6-203ENST00000368059 2743 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
ZIC3O60481 AL512283.1-201ENST00000606756 1384 ntBASIC5.64□□□□□ -1.51
ZIC3O60481 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC5.64□□□□□ -1.51
ZIC3O60481 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC5.64□□□□□ -1.51
ZIC3O60481 Z93929.1-201ENST00000418200 1475 ntBASIC5.64□□□□□ -1.51
ZIC3O60481 FANCD2-205ENST00000431693 2450 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
ZIC3O60481 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC5.64□□□□□ -1.51
ZIC3O60481 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC5.64□□□□□ -1.51
ZIC3O60481 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
ZIC3O60481 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
ZIC3O60481 NUDT13-206ENST00000537969 2151 ntTSL 2 BASIC5.63□□□□□ -1.51
ZIC3O60481 LINC01606-203ENST00000519160 2292 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
ZIC3O60481 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC5.63□□□□□ -1.51
ZIC3O60481 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
ZIC3O60481 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC5.63□□□□□ -1.51
ZIC3O60481 TMEM8B-202ENST00000377991 14112 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
ZIC3O60481 AL442071.1-201ENST00000289890 558 ntTSL 3 BASIC5.63□□□□□ -1.51
ZIC3O60481 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
ZIC3O60481 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC5.63□□□□□ -1.51
ZIC3O60481 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC5.63□□□□□ -1.51
ZIC3O60481 AL512622.1-201ENST00000414106 481 ntTSL 3 BASIC5.63□□□□□ -1.51
ZIC3O60481 MTND2P9-201ENST00000422293 931 ntBASIC5.63□□□□□ -1.51
ZIC3O60481 AC007679.3-201ENST00000434035 414 ntBASIC5.63□□□□□ -1.51
ZIC3O60481 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC5.63□□□□□ -1.51
ZIC3O60481 AC016908.1-201ENST00000442571 1219 ntBASIC5.63□□□□□ -1.51
ZIC3O60481 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC5.63□□□□□ -1.51
ZIC3O60481 TNS3-209ENST00000458317 1156 ntTSL 5 BASIC5.63□□□□□ -1.51
ZIC3O60481 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC5.63□□□□□ -1.51
ZIC3O60481 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC5.63□□□□□ -1.51
ZIC3O60481 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC5.63□□□□□ -1.51
ZIC3O60481 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC5.63□□□□□ -1.51
ZIC3O60481 RNA5SP434-201ENST00000516647 121 ntBASIC5.63□□□□□ -1.51
ZIC3O60481 Y_RNA.710-201ENST00000516975 110 ntBASIC5.63□□□□□ -1.51
ZIC3O60481 AC011853.1-201ENST00000518911 454 ntBASIC5.63□□□□□ -1.51
ZIC3O60481 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC5.63□□□□□ -1.51
ZIC3O60481 KCTD9P6-201ENST00000522306 950 ntBASIC5.63□□□□□ -1.51
ZIC3O60481 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC5.63□□□□□ -1.51
ZIC3O60481 AP003049.1-201ENST00000529418 457 ntBASIC5.63□□□□□ -1.51
ZIC3O60481 NPIPB1P-201ENST00000547442 1129 ntTSL 5 BASIC5.63□□□□□ -1.51
ZIC3O60481 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC5.63□□□□□ -1.51
ZIC3O60481 COPZ1-218ENST00000553231 551 ntTSL 5 BASIC5.63□□□□□ -1.51
ZIC3O60481 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
ZIC3O60481 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC5.63□□□□□ -1.51
ZIC3O60481 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC5.63□□□□□ -1.51
ZIC3O60481 AC027229.1-201ENST00000583887 253 ntBASIC5.63□□□□□ -1.51
ZIC3O60481 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC5.63□□□□□ -1.51
ZIC3O60481 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC5.63□□□□□ -1.51
ZIC3O60481 NPIPB1P-202ENST00000588786 828 ntBASIC5.63□□□□□ -1.51
ZIC3O60481 DYNLL1P1-201ENST00000595442 269 ntBASIC5.63□□□□□ -1.51
ZIC3O60481 AC073592.6-201ENST00000624271 415 ntBASIC5.63□□□□□ -1.51
ZIC3O60481 AC001226.2-204ENST00000638101 2645 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
ZIC3O60481 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
ZIC3O60481 AC027575.3-201ENST00000583058 2747 ntBASIC5.63□□□□□ -1.51
ZIC3O60481 EEF1A1P9-201ENST00000514975 1383 ntBASIC5.63□□□□□ -1.51
ZIC3O60481 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
ZIC3O60481 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
ZIC3O60481 AC104966.1-201ENST00000467010 1464 ntBASIC5.63□□□□□ -1.51
ZIC3O60481 MAT2B-201ENST00000280969 2226 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 74.2 ms