Protein–RNA interactions for Protein: O14647

CHD2, Chromodomain-helicase-DNA-binding protein 2, humanhuman

Known RBP Predictions only

Length 1,828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2O14647 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC8.18□□□□□ -1.1
CHD2O14647 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC8.18□□□□□ -1.1
CHD2O14647 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC8.18□□□□□ -1.1
CHD2O14647 RN7SKP98-201ENST00000517070 156 ntBASIC8.18□□□□□ -1.1
CHD2O14647 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC8.18□□□□□ -1.1
CHD2O14647 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC8.18□□□□□ -1.1
CHD2O14647 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC8.18□□□□□ -1.1
CHD2O14647 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC8.18□□□□□ -1.1
CHD2O14647 AL450226.2-201ENST00000622913 439 ntBASIC8.18□□□□□ -1.1
CHD2O14647 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC8.18□□□□□ -1.1
CHD2O14647 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
CHD2O14647 SHPRH-203ENST00000367505 7201 ntAPPRIS P2 TSL 5 BASIC8.18□□□□□ -1.1
CHD2O14647 SLC5A1-204ENST00000543737 4752 ntTSL 2 BASIC8.18□□□□□ -1.1
CHD2O14647 CLASP1-202ENST00000397587 7915 ntTSL 5 BASIC8.18□□□□□ -1.1
CHD2O14647 EPHA1-AS1-202ENST00000429289 5018 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
CHD2O14647 IL20-202ENST00000367098 1553 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
CHD2O14647 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC8.18□□□□□ -1.1
CHD2O14647 NRXN3-201ENST00000281127 8504 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
CHD2O14647 LINC00261-202ENST00000564492 4912 ntTSL 3 BASIC8.18□□□□□ -1.1
CHD2O14647 ZNF33A-204ENST00000458705 6084 ntAPPRIS P3 TSL 1 (best) BASIC8.17□□□□□ -1.1
CHD2O14647 RNA5SP30-201ENST00000365552 115 ntBASIC8.17□□□□□ -1.1
CHD2O14647 HIST1H3PS1-201ENST00000404612 417 ntBASIC8.17□□□□□ -1.1
CHD2O14647 LINC01687-201ENST00000416327 795 ntTSL 3 BASIC8.17□□□□□ -1.1
CHD2O14647 AC006335.2-201ENST00000437993 330 ntBASIC8.17□□□□□ -1.1
CHD2O14647 AC092801.1-201ENST00000443763 581 ntTSL 3 BASIC8.17□□□□□ -1.1
CHD2O14647 AL450996.1-201ENST00000445574 1202 ntBASIC8.17□□□□□ -1.1
CHD2O14647 VDAC2P4-201ENST00000452925 711 ntBASIC8.17□□□□□ -1.1
CHD2O14647 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC8.17□□□□□ -1.1
CHD2O14647 SCARNA6.1-201ENST00000516989 238 ntBASIC8.17□□□□□ -1.1
CHD2O14647 AC087664.2-202ENST00000521274 515 ntTSL 3 BASIC8.17□□□□□ -1.1
CHD2O14647 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC8.17□□□□□ -1.1
CHD2O14647 PTER-205ENST00000535784 1203 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
CHD2O14647 CR383656.6-201ENST00000550518 394 ntBASIC8.17□□□□□ -1.1
CHD2O14647 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC8.17□□□□□ -1.1
CHD2O14647 HSPE1P2-201ENST00000554777 306 ntBASIC8.17□□□□□ -1.1
CHD2O14647 GARSP1-201ENST00000570895 719 ntBASIC8.17□□□□□ -1.1
CHD2O14647 AC024255.1-201ENST00000614376 102 ntBASIC8.17□□□□□ -1.1
CHD2O14647 TMEFF2-203ENST00000409056 3364 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
CHD2O14647 AP002364.1-201ENST00000623330 3386 ntBASIC8.17□□□□□ -1.1
CHD2O14647 GTF2A1-203ENST00000553612 6306 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
CHD2O14647 STAB2-201ENST00000388887 8251 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
CHD2O14647 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC8.17□□□□□ -1.1
CHD2O14647 CD86-204ENST00000469710 1604 ntTSL 2 BASIC8.17□□□□□ -1.1
CHD2O14647 OXCT1-206ENST00000512084 1593 ntTSL 2 BASIC8.17□□□□□ -1.1
CHD2O14647 ZNF827-203ENST00000508784 7463 ntAPPRIS ALT2 TSL 1 (best) BASIC8.17□□□□□ -1.1
CHD2O14647 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC8.17□□□□□ -1.1
CHD2O14647 PLEKHM3-202ENST00000427836 9807 ntAPPRIS P1 TSL 5 BASIC8.17□□□□□ -1.1
CHD2O14647 SPHKAP-202ENST00000392056 6917 ntAPPRIS ALT2 TSL 1 (best) BASIC8.17□□□□□ -1.1
CHD2O14647 AL161912.4-201ENST00000623889 2468 ntBASIC8.17□□□□□ -1.1
CHD2O14647 MAGT1-201ENST00000358075 4047 ntAPPRIS P2 TSL 1 (best) BASIC8.17□□□□□ -1.1
CHD2O14647 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
CHD2O14647 RPL37P18-201ENST00000411602 243 ntBASIC8.17□□□□□ -1.1
CHD2O14647 PRUNEP1-201ENST00000425846 705 ntBASIC8.17□□□□□ -1.1
CHD2O14647 AC092017.2-201ENST00000427600 362 ntBASIC8.17□□□□□ -1.1
CHD2O14647 RPL15P21-201ENST00000495592 567 ntBASIC8.17□□□□□ -1.1
CHD2O14647 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC8.17□□□□□ -1.1
CHD2O14647 AC139365.2-201ENST00000517972 253 ntBASIC8.17□□□□□ -1.1
CHD2O14647 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC8.17□□□□□ -1.1
CHD2O14647 AC126177.5-201ENST00000549599 178 ntBASIC8.17□□□□□ -1.1
CHD2O14647 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC8.17□□□□□ -1.1
CHD2O14647 AC087783.2-201ENST00000605070 562 ntBASIC8.17□□□□□ -1.1
CHD2O14647 AP000550.3-201ENST00000637734 379 ntBASIC8.17□□□□□ -1.1
CHD2O14647 AC110597.1-201ENST00000562669 3176 ntBASIC8.17□□□□□ -1.1
CHD2O14647 MFSD8-218ENST00000641186 4448 ntBASIC8.17□□□□□ -1.1
CHD2O14647 NUP214-201ENST00000359428 7600 ntAPPRIS P3 TSL 1 (best) BASIC8.17□□□□□ -1.1
CHD2O14647 HYAL4-201ENST00000223026 2407 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
CHD2O14647 ARPP21-203ENST00000396482 2416 ntTSL 2 BASIC8.17□□□□□ -1.1
CHD2O14647 TTC21A-203ENST00000431162 4209 ntAPPRIS ALT2 TSL 1 (best) BASIC8.17□□□□□ -1.1
CHD2O14647 DENND2C-202ENST00000393276 5701 ntAPPRIS P1 TSL 5 BASIC8.17□□□□□ -1.1
CHD2O14647 HEPH-209ENST00000519389 6013 ntAPPRIS P3 TSL 1 (best) BASIC8.17□□□□□ -1.1
CHD2O14647 CAST-222ENST00000508579 1758 ntTSL 2 BASIC8.16□□□□□ -1.1
CHD2O14647 MYT1L-202ENST00000399161 7063 ntAPPRIS ALT2 TSL 1 (best) BASIC8.16□□□□□ -1.1
CHD2O14647 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
CHD2O14647 CPNE4-208ENST00000511604 2503 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
CHD2O14647 FTO-215ENST00000636491 1676 ntTSL 5 BASIC8.16□□□□□ -1.1
CHD2O14647 TCL6-203ENST00000459662 3307 ntTSL 2 BASIC8.16□□□□□ -1.1
CHD2O14647 MSR1-202ENST00000350896 3572 ntTSL 5 BASIC8.16□□□□□ -1.1
CHD2O14647 ATP1A1-203ENST00000369496 3572 ntTSL 2 BASIC8.16□□□□□ -1.1
CHD2O14647 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
CHD2O14647 PTPRG-AS1-204ENST00000474795 2661 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
CHD2O14647 NIPBL-202ENST00000448238 8729 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
CHD2O14647 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC8.16□□□□□ -1.1
CHD2O14647 MED12-202ENST00000374080 6795 ntAPPRIS P2 TSL 1 (best) BASIC8.16□□□□□ -1.1
CHD2O14647 RNU6ATAC18P-201ENST00000408413 101 ntBASIC8.16□□□□□ -1.1
CHD2O14647 SLC35E1P1-201ENST00000419313 864 ntBASIC8.16□□□□□ -1.1
CHD2O14647 AC108075.1-201ENST00000424692 529 ntBASIC8.16□□□□□ -1.1
CHD2O14647 AC068522.1-201ENST00000482895 345 ntBASIC8.16□□□□□ -1.1
CHD2O14647 AC093535.1-203ENST00000512500 730 ntTSL 3 BASIC8.16□□□□□ -1.1
CHD2O14647 OR4A42P-201ENST00000531397 938 ntBASIC8.16□□□□□ -1.1
CHD2O14647 RBM22P12-201ENST00000567098 1255 ntBASIC8.16□□□□□ -1.1
CHD2O14647 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC8.16□□□□□ -1.1
CHD2O14647 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC8.16□□□□□ -1.1
CHD2O14647 CSNK1A1-210ENST00000606719 835 ntTSL 2 BASIC8.16□□□□□ -1.1
CHD2O14647 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC8.16□□□□□ -1.1
CHD2O14647 PLEKHG4B-204ENST00000637938 12612 ntAPPRIS ALT2 TSL 5 BASIC8.16□□□□□ -1.1
CHD2O14647 CTNND1-221ENST00000529873 5931 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
CHD2O14647 AC112243.1-201ENST00000623949 3851 ntBASIC8.16□□□□□ -1.1
CHD2O14647 AL136981.1-203ENST00000451452 3844 ntBASIC8.16□□□□□ -1.1
CHD2O14647 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
CHD2O14647 ZRANB1-201ENST00000359653 5695 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 68.7 ms