Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 YWHAZP6-201ENST00000399764 738 ntBASIC6.5□□□□□ -1.37
TRIM38O00635 RNA5SP198-201ENST00000410376 127 ntBASIC6.5□□□□□ -1.37
TRIM38O00635 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
TRIM38O00635 AL356476.1-201ENST00000421481 480 ntTSL 5 BASIC6.5□□□□□ -1.37
TRIM38O00635 AC073310.1-201ENST00000423226 1033 ntBASIC6.5□□□□□ -1.37
TRIM38O00635 QKI-206ENST00000424802 954 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
TRIM38O00635 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC6.5□□□□□ -1.37
TRIM38O00635 AL121902.1-201ENST00000426963 459 ntTSL 2 BASIC6.5□□□□□ -1.37
TRIM38O00635 AC115283.1-201ENST00000427353 400 ntBASIC6.5□□□□□ -1.37
TRIM38O00635 AK3P5-201ENST00000432033 519 ntBASIC6.5□□□□□ -1.37
TRIM38O00635 AKR1D1-203ENST00000432161 1236 ntTSL 2 BASIC6.5□□□□□ -1.37
TRIM38O00635 AL389925.1-201ENST00000432257 728 ntBASIC6.5□□□□□ -1.37
TRIM38O00635 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC6.5□□□□□ -1.37
TRIM38O00635 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC6.5□□□□□ -1.37
TRIM38O00635 AL020997.1-201ENST00000446554 349 ntBASIC6.5□□□□□ -1.37
TRIM38O00635 AL353718.1-201ENST00000451028 517 ntBASIC6.5□□□□□ -1.37
TRIM38O00635 MTND2P39-201ENST00000457230 764 ntBASIC6.5□□□□□ -1.37
TRIM38O00635 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC6.5□□□□□ -1.37
TRIM38O00635 RN7SL552P-201ENST00000462094 276 ntBASIC6.5□□□□□ -1.37
TRIM38O00635 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC6.5□□□□□ -1.37
TRIM38O00635 PCNAP1-201ENST00000505363 709 ntBASIC6.5□□□□□ -1.37
TRIM38O00635 AC109361.2-202ENST00000512514 483 ntTSL 3 BASIC6.5□□□□□ -1.37
TRIM38O00635 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
TRIM38O00635 INTS9-AS1-201ENST00000520055 548 ntTSL 5 BASIC6.5□□□□□ -1.37
TRIM38O00635 OR4V1P-201ENST00000525394 1140 ntBASIC6.5□□□□□ -1.37
TRIM38O00635 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC6.5□□□□□ -1.37
TRIM38O00635 AC092451.2-201ENST00000538746 658 ntBASIC6.5□□□□□ -1.37
TRIM38O00635 LINC02207-201ENST00000554530 1256 ntTSL 5 BASIC6.5□□□□□ -1.37
TRIM38O00635 BLOC1S6-209ENST00000565409 616 ntTSL 4 BASIC6.5□□□□□ -1.37
TRIM38O00635 AL158211.1-201ENST00000566763 763 ntBASIC6.5□□□□□ -1.37
TRIM38O00635 AL078601.3-201ENST00000573303 535 ntBASIC6.5□□□□□ -1.37
TRIM38O00635 PPIAL4A-201ENST00000577856 660 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
TRIM38O00635 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
TRIM38O00635 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC6.5□□□□□ -1.37
TRIM38O00635 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC6.5□□□□□ -1.37
TRIM38O00635 AL078623.1-201ENST00000602702 907 ntBASIC6.5□□□□□ -1.37
TRIM38O00635 IGKV2OR2-1-201ENST00000605129 304 ntBASIC6.5□□□□□ -1.37
TRIM38O00635 CNTNAP3P1-201ENST00000616657 906 ntBASIC6.5□□□□□ -1.37
TRIM38O00635 TCL6_3.1-201ENST00000619064 137 ntBASIC6.5□□□□□ -1.37
TRIM38O00635 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC6.5□□□□□ -1.37
TRIM38O00635 LINC00216-201ENST00000623548 1126 ntBASIC6.5□□□□□ -1.37
TRIM38O00635 AC012254.5-201ENST00000623573 478 ntBASIC6.5□□□□□ -1.37
TRIM38O00635 AP002371.2-201ENST00000624450 503 ntBASIC6.5□□□□□ -1.37
TRIM38O00635 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC6.5□□□□□ -1.37
TRIM38O00635 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC6.5□□□□□ -1.37
TRIM38O00635 ZNF329-204ENST00000598312 3410 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
TRIM38O00635 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC6.5□□□□□ -1.37
TRIM38O00635 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
TRIM38O00635 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
TRIM38O00635 ERMARD-202ENST00000366772 2003 ntTSL 5 BASIC6.5□□□□□ -1.37
TRIM38O00635 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
TRIM38O00635 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
TRIM38O00635 ZNF600-201ENST00000338230 3829 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
TRIM38O00635 LGALS17A-201ENST00000412609 2562 ntTSL 2 BASIC6.5□□□□□ -1.37
TRIM38O00635 PLD1-202ENST00000351298 5604 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
TRIM38O00635 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC6.5□□□□□ -1.37
TRIM38O00635 C4orf26-201ENST00000311623 1874 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
TRIM38O00635 SYT14-207ENST00000629778 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
TRIM38O00635 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
TRIM38O00635 FTO-215ENST00000636491 1676 ntTSL 5 BASIC6.49□□□□□ -1.37
TRIM38O00635 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
TRIM38O00635 PSMC6-219ENST00000612399 1590 ntAPPRIS P2 TSL 1 (best) BASIC6.49□□□□□ -1.37
TRIM38O00635 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC6.49□□□□□ -1.37
TRIM38O00635 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
TRIM38O00635 PRKAR1A-204ENST00000536854 3697 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
TRIM38O00635 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC6.49□□□□□ -1.37
TRIM38O00635 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
TRIM38O00635 RNA5SP188-201ENST00000362916 129 ntBASIC6.49□□□□□ -1.37
TRIM38O00635 SNORA38B-201ENST00000363524 131 ntBASIC6.49□□□□□ -1.37
TRIM38O00635 ZNF669-202ENST00000366500 489 ntTSL 3 BASIC6.49□□□□□ -1.37
TRIM38O00635 TINAG-202ENST00000370864 692 ntTSL 2 BASIC6.49□□□□□ -1.37
TRIM38O00635 RNA5SP122-201ENST00000384457 108 ntBASIC6.49□□□□□ -1.37
TRIM38O00635 MIR323B-201ENST00000385269 82 ntBASIC6.49□□□□□ -1.37
TRIM38O00635 CCNB2P1-201ENST00000399411 1150 ntBASIC6.49□□□□□ -1.37
TRIM38O00635 ST13P16-201ENST00000401760 781 ntBASIC6.49□□□□□ -1.37
TRIM38O00635 NACAP7-201ENST00000407371 609 ntBASIC6.49□□□□□ -1.37
TRIM38O00635 OR2A2-201ENST00000408979 1051 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
TRIM38O00635 ATP5A1P8-201ENST00000423669 1291 ntBASIC6.49□□□□□ -1.37
TRIM38O00635 AL512363.1-201ENST00000425089 586 ntTSL 2 BASIC6.49□□□□□ -1.37
TRIM38O00635 EIF2S2P3-201ENST00000428356 999 ntBASIC6.49□□□□□ -1.37
TRIM38O00635 AC005532.1-201ENST00000430266 471 ntTSL 5 BASIC6.49□□□□□ -1.37
TRIM38O00635 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC6.49□□□□□ -1.37
TRIM38O00635 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC6.49□□□□□ -1.37
TRIM38O00635 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC6.49□□□□□ -1.37
TRIM38O00635 AC104779.1-201ENST00000503557 441 ntTSL 3 BASIC6.49□□□□□ -1.37
TRIM38O00635 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC6.49□□□□□ -1.37
TRIM38O00635 TBCA-209ENST00000522370 435 ntTSL 3 BASIC6.49□□□□□ -1.37
TRIM38O00635 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC6.49□□□□□ -1.37
TRIM38O00635 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
TRIM38O00635 AC009852.1-201ENST00000564058 465 ntTSL 3 BASIC6.49□□□□□ -1.37
TRIM38O00635 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC6.49□□□□□ -1.37
TRIM38O00635 AC079315.1-201ENST00000602952 623 ntBASIC6.49□□□□□ -1.37
TRIM38O00635 HMGB1P51-201ENST00000605166 638 ntBASIC6.49□□□□□ -1.37
TRIM38O00635 AC007100.1-201ENST00000606382 478 ntTSL 5 BASIC6.49□□□□□ -1.37
TRIM38O00635 AL135999.3-201ENST00000610501 812 ntBASIC6.49□□□□□ -1.37
TRIM38O00635 BRCC3-209ENST00000620502 882 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
TRIM38O00635 AC012653.2-201ENST00000621880 420 ntBASIC6.49□□□□□ -1.37
TRIM38O00635 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC6.49□□□□□ -1.37
TRIM38O00635 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC6.49□□□□□ -1.37
TRIM38O00635 FGFR2-218ENST00000478859 3990 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 127.5 ms