Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
TBC1D3FA6NER0 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
TBC1D3FA6NER0 FLRT3-201ENST00000341420 3971 ntAPPRIS P1 TSL 2 BASIC6.32□□□□□ -1.4
TBC1D3FA6NER0 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
TBC1D3FA6NER0 AMD1-203ENST00000368882 3059 ntTSL 2 BASIC6.31□□□□□ -1.4
TBC1D3FA6NER0 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
TBC1D3FA6NER0 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
TBC1D3FA6NER0 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
TBC1D3FA6NER0 AC010624.4-201ENST00000597606 1351 ntBASIC6.31□□□□□ -1.4
TBC1D3FA6NER0 RPL37-201ENST00000274242 7686 ntAPPRIS P2 TSL 1 (best) BASIC6.31□□□□□ -1.4
TBC1D3FA6NER0 NBPF25P-202ENST00000619932 3827 ntTSL 2 BASIC6.31□□□□□ -1.4
TBC1D3FA6NER0 RASGEF1B-214ENST00000638048 2386 ntTSL 5 BASIC6.31□□□□□ -1.4
TBC1D3FA6NER0 ACACA-231ENST00000614428 9554 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
TBC1D3FA6NER0 COG2-209ENST00000534989 2963 ntTSL 2 BASIC6.31□□□□□ -1.4
TBC1D3FA6NER0 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
TBC1D3FA6NER0 TESPA1-210ENST00000531122 1517 ntAPPRIS ALT2 TSL 2 BASIC6.31□□□□□ -1.4
TBC1D3FA6NER0 TEK-202ENST00000406359 3935 ntTSL 2 BASIC6.31□□□□□ -1.4
TBC1D3FA6NER0 NCOR1-201ENST00000268712 10720 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
TBC1D3FA6NER0 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
TBC1D3FA6NER0 RNA5SP346-201ENST00000363541 121 ntBASIC6.31□□□□□ -1.4
TBC1D3FA6NER0 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
TBC1D3FA6NER0 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
TBC1D3FA6NER0 UBE2V1P15-201ENST00000407776 448 ntBASIC6.31□□□□□ -1.4
TBC1D3FA6NER0 AL357078.2-201ENST00000416486 427 ntBASIC6.31□□□□□ -1.4
TBC1D3FA6NER0 HTR3E-AS1-201ENST00000431427 515 ntTSL 4 BASIC6.31□□□□□ -1.4
TBC1D3FA6NER0 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC6.31□□□□□ -1.4
TBC1D3FA6NER0 DNAJA1P5-201ENST00000440278 943 ntBASIC6.31□□□□□ -1.4
TBC1D3FA6NER0 SEPHS1P4-201ENST00000446112 1176 ntBASIC6.31□□□□□ -1.4
TBC1D3FA6NER0 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC6.31□□□□□ -1.4
TBC1D3FA6NER0 MAGI2-AS3-210ENST00000448636 798 ntTSL 5 BASIC6.31□□□□□ -1.4
TBC1D3FA6NER0 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC6.31□□□□□ -1.4
TBC1D3FA6NER0 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC6.31□□□□□ -1.4
TBC1D3FA6NER0 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC6.31□□□□□ -1.4
TBC1D3FA6NER0 AC010343.2-201ENST00000510162 224 ntBASIC6.31□□□□□ -1.4
TBC1D3FA6NER0 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC6.31□□□□□ -1.4
TBC1D3FA6NER0 SETP12-201ENST00000514068 805 ntBASIC6.31□□□□□ -1.4
TBC1D3FA6NER0 AC112206.4-201ENST00000515142 405 ntBASIC6.31□□□□□ -1.4
TBC1D3FA6NER0 AC090709.1-201ENST00000548384 716 ntTSL 3 BASIC6.31□□□□□ -1.4
TBC1D3FA6NER0 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
TBC1D3FA6NER0 LINC00557-201ENST00000563184 1279 ntBASIC6.31□□□□□ -1.4
TBC1D3FA6NER0 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC6.31□□□□□ -1.4
TBC1D3FA6NER0 AC122134.1-202ENST00000569111 1201 ntBASIC6.31□□□□□ -1.4
TBC1D3FA6NER0 AC007346.1-201ENST00000569208 867 ntBASIC6.31□□□□□ -1.4
TBC1D3FA6NER0 AC008507.3-201ENST00000585753 472 ntBASIC6.31□□□□□ -1.4
TBC1D3FA6NER0 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC6.31□□□□□ -1.4
TBC1D3FA6NER0 AC040174.2-201ENST00000602701 465 ntBASIC6.31□□□□□ -1.4
TBC1D3FA6NER0 AC139493.1-201ENST00000604368 397 ntBASIC6.31□□□□□ -1.4
TBC1D3FA6NER0 AL365181.4-201ENST00000609800 547 ntBASIC6.31□□□□□ -1.4
TBC1D3FA6NER0 AC244131.2-201ENST00000612592 512 ntTSL 3 BASIC6.31□□□□□ -1.4
TBC1D3FA6NER0 AL356752.1-201ENST00000615844 593 ntBASIC6.31□□□□□ -1.4
TBC1D3FA6NER0 AC119674.1-220ENST00000641502 1048 ntBASIC6.31□□□□□ -1.4
TBC1D3FA6NER0 MDM4-216ENST00000616250 9597 ntTSL 5 BASIC6.31□□□□□ -1.4
TBC1D3FA6NER0 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
TBC1D3FA6NER0 ZNF600-201ENST00000338230 3829 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
TBC1D3FA6NER0 LRRFIP2-201ENST00000336686 3208 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
TBC1D3FA6NER0 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
TBC1D3FA6NER0 EEF1A1P9-201ENST00000514975 1383 ntBASIC6.31□□□□□ -1.4
TBC1D3FA6NER0 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
TBC1D3FA6NER0 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC6.3□□□□□ -1.4
TBC1D3FA6NER0 TMTC3-201ENST00000266712 7203 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
TBC1D3FA6NER0 SATL1-202ENST00000509231 2224 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
TBC1D3FA6NER0 LINC01440-201ENST00000416190 1340 ntTSL 5 BASIC6.3□□□□□ -1.4
TBC1D3FA6NER0 NEK2P2-201ENST00000438441 1338 ntBASIC6.3□□□□□ -1.4
TBC1D3FA6NER0 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC6.3□□□□□ -1.4
TBC1D3FA6NER0 TMED10-201ENST00000303575 4127 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
TBC1D3FA6NER0 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
TBC1D3FA6NER0 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC6.3□□□□□ -1.4
TBC1D3FA6NER0 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
TBC1D3FA6NER0 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
TBC1D3FA6NER0 RNA5SP350-201ENST00000363298 111 ntBASIC6.3□□□□□ -1.4
TBC1D3FA6NER0 AL050335.1-201ENST00000396909 869 ntBASIC6.3□□□□□ -1.4
TBC1D3FA6NER0 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC6.3□□□□□ -1.4
TBC1D3FA6NER0 AC084816.1-201ENST00000413794 565 ntTSL 4 BASIC6.3□□□□□ -1.4
TBC1D3FA6NER0 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC6.3□□□□□ -1.4
TBC1D3FA6NER0 AL031186.1-201ENST00000433125 385 ntTSL 3 BASIC6.3□□□□□ -1.4
TBC1D3FA6NER0 MRPS33P4-201ENST00000434892 317 ntBASIC6.3□□□□□ -1.4
TBC1D3FA6NER0 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC6.3□□□□□ -1.4
TBC1D3FA6NER0 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC6.3□□□□□ -1.4
TBC1D3FA6NER0 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
TBC1D3FA6NER0 AC097463.1-201ENST00000447288 481 ntBASIC6.3□□□□□ -1.4
TBC1D3FA6NER0 AC023194.2-201ENST00000465398 406 ntBASIC6.3□□□□□ -1.4
TBC1D3FA6NER0 RPL34P33-201ENST00000486062 334 ntBASIC6.3□□□□□ -1.4
TBC1D3FA6NER0 OR9N1P-201ENST00000491296 333 ntBASIC6.3□□□□□ -1.4
TBC1D3FA6NER0 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC6.3□□□□□ -1.4
TBC1D3FA6NER0 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC6.3□□□□□ -1.4
TBC1D3FA6NER0 UGT2A3P7-201ENST00000510485 734 ntBASIC6.3□□□□□ -1.4
TBC1D3FA6NER0 AC092436.4-201ENST00000510905 483 ntTSL 3 BASIC6.3□□□□□ -1.4
TBC1D3FA6NER0 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC6.3□□□□□ -1.4
TBC1D3FA6NER0 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC6.3□□□□□ -1.4
TBC1D3FA6NER0 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC6.3□□□□□ -1.4
TBC1D3FA6NER0 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC6.3□□□□□ -1.4
TBC1D3FA6NER0 OR4A46P-201ENST00000527255 933 ntBASIC6.3□□□□□ -1.4
TBC1D3FA6NER0 AC027369.2-201ENST00000528030 440 ntBASIC6.3□□□□□ -1.4
TBC1D3FA6NER0 TRIM51DP-201ENST00000529746 596 ntBASIC6.3□□□□□ -1.4
TBC1D3FA6NER0 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC6.3□□□□□ -1.4
TBC1D3FA6NER0 CAPN3-210ENST00000561817 915 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
TBC1D3FA6NER0 AC092332.1-201ENST00000563684 829 ntBASIC6.3□□□□□ -1.4
TBC1D3FA6NER0 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC6.3□□□□□ -1.4
TBC1D3FA6NER0 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC6.3□□□□□ -1.4
TBC1D3FA6NER0 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC6.3□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 88.4 ms