Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 AC009518.1-202ENST00000415393 1229 ntTSL 2 BASIC7.45□□□□□ -1.22
CTDP1Q9Y5B0 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC7.45□□□□□ -1.22
CTDP1Q9Y5B0 NFIA-AS2-202ENST00000421455 768 ntTSL 4 BASIC7.45□□□□□ -1.22
CTDP1Q9Y5B0 RPL23AP85-201ENST00000421838 433 ntBASIC7.45□□□□□ -1.22
CTDP1Q9Y5B0 AL157884.1-201ENST00000424561 454 ntBASIC7.45□□□□□ -1.22
CTDP1Q9Y5B0 FAR1P1-201ENST00000427163 934 ntBASIC7.45□□□□□ -1.22
CTDP1Q9Y5B0 AL049594.1-201ENST00000432834 805 ntTSL 3 BASIC7.45□□□□□ -1.22
CTDP1Q9Y5B0 RPL5P7-201ENST00000444235 813 ntBASIC7.45□□□□□ -1.22
CTDP1Q9Y5B0 AC063943.2-201ENST00000495697 534 ntBASIC7.45□□□□□ -1.22
CTDP1Q9Y5B0 SNX18P24-201ENST00000505249 671 ntBASIC7.45□□□□□ -1.22
CTDP1Q9Y5B0 HMGN1P17-201ENST00000513734 295 ntBASIC7.45□□□□□ -1.22
CTDP1Q9Y5B0 AC138701.1-201ENST00000524329 714 ntBASIC7.45□□□□□ -1.22
CTDP1Q9Y5B0 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC7.45□□□□□ -1.22
CTDP1Q9Y5B0 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC7.45□□□□□ -1.22
CTDP1Q9Y5B0 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC7.45□□□□□ -1.22
CTDP1Q9Y5B0 MIR4310-201ENST00000582950 57 ntBASIC7.45□□□□□ -1.22
CTDP1Q9Y5B0 AC090415.2-201ENST00000584078 374 ntTSL 3 BASIC7.45□□□□□ -1.22
CTDP1Q9Y5B0 AC245884.10-201ENST00000597355 337 ntBASIC7.45□□□□□ -1.22
CTDP1Q9Y5B0 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC7.45□□□□□ -1.22
CTDP1Q9Y5B0 DAOA-AS1_1.1-201ENST00000613021 201 ntBASIC7.45□□□□□ -1.22
CTDP1Q9Y5B0 RN7SL261P-201ENST00000613441 282 ntBASIC7.45□□□□□ -1.22
CTDP1Q9Y5B0 AC005393.1-201ENST00000617916 584 ntBASIC7.45□□□□□ -1.22
CTDP1Q9Y5B0 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
CTDP1Q9Y5B0 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
CTDP1Q9Y5B0 BRD8-204ENST00000411594 2967 ntTSL 5 BASIC7.45□□□□□ -1.22
CTDP1Q9Y5B0 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
CTDP1Q9Y5B0 HSD17B4-202ENST00000414835 2551 ntTSL 2 BASIC7.45□□□□□ -1.22
CTDP1Q9Y5B0 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
CTDP1Q9Y5B0 AC087477.2-202ENST00000558499 4856 ntTSL 4 BASIC7.45□□□□□ -1.22
CTDP1Q9Y5B0 ERVFRD-1-201ENST00000472091 3198 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
CTDP1Q9Y5B0 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
CTDP1Q9Y5B0 BTK-209ENST00000618050 2417 ntTSL 5 BASIC7.44□□□□□ -1.22
CTDP1Q9Y5B0 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC7.44□□□□□ -1.22
CTDP1Q9Y5B0 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC7.44□□□□□ -1.22
CTDP1Q9Y5B0 CYP3A5-201ENST00000222982 1720 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
CTDP1Q9Y5B0 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC7.44□□□□□ -1.22
CTDP1Q9Y5B0 NUP153-201ENST00000262077 5487 ntAPPRIS P3 TSL 1 (best) BASIC7.44□□□□□ -1.22
CTDP1Q9Y5B0 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
CTDP1Q9Y5B0 OR1F12-201ENST00000402365 945 ntBASIC7.44□□□□□ -1.22
CTDP1Q9Y5B0 RNA5SP198-201ENST00000410376 127 ntBASIC7.44□□□□□ -1.22
CTDP1Q9Y5B0 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC7.44□□□□□ -1.22
CTDP1Q9Y5B0 IGLV3-4-201ENST00000432300 244 ntBASIC7.44□□□□□ -1.22
CTDP1Q9Y5B0 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC7.44□□□□□ -1.22
CTDP1Q9Y5B0 AC007679.3-201ENST00000434035 414 ntBASIC7.44□□□□□ -1.22
CTDP1Q9Y5B0 AMYP1-201ENST00000440059 1023 ntBASIC7.44□□□□□ -1.22
CTDP1Q9Y5B0 SEPT14P12-201ENST00000442280 560 ntBASIC7.44□□□□□ -1.22
CTDP1Q9Y5B0 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC7.44□□□□□ -1.22
CTDP1Q9Y5B0 RBMY3AP-201ENST00000449381 1145 ntBASIC7.44□□□□□ -1.22
CTDP1Q9Y5B0 OR52I1-201ENST00000450052 1050 ntBASIC7.44□□□□□ -1.22
CTDP1Q9Y5B0 FCF1P6-201ENST00000456841 595 ntBASIC7.44□□□□□ -1.22
CTDP1Q9Y5B0 AC002075.1-201ENST00000457396 676 ntBASIC7.44□□□□□ -1.22
CTDP1Q9Y5B0 AC009963.3-201ENST00000458090 486 ntBASIC7.44□□□□□ -1.22
CTDP1Q9Y5B0 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC7.44□□□□□ -1.22
CTDP1Q9Y5B0 AC091965.3-201ENST00000506236 208 ntBASIC7.44□□□□□ -1.22
CTDP1Q9Y5B0 AC068721.1-201ENST00000507156 583 ntTSL 5 BASIC7.44□□□□□ -1.22
CTDP1Q9Y5B0 AC113398.2-201ENST00000507630 558 ntBASIC7.44□□□□□ -1.22
CTDP1Q9Y5B0 LINC02196-201ENST00000512838 568 ntTSL 4 BASIC7.44□□□□□ -1.22
CTDP1Q9Y5B0 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC7.44□□□□□ -1.22
CTDP1Q9Y5B0 ODF1-202ENST00000518835 368 ntTSL 3 BASIC7.44□□□□□ -1.22
CTDP1Q9Y5B0 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC7.44□□□□□ -1.22
CTDP1Q9Y5B0 SOX9-AS1-208ENST00000529667 340 ntTSL 3 BASIC7.44□□□□□ -1.22
CTDP1Q9Y5B0 FAM66C-206ENST00000535567 724 ntTSL 5 BASIC7.44□□□□□ -1.22
CTDP1Q9Y5B0 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC7.44□□□□□ -1.22
CTDP1Q9Y5B0 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC7.44□□□□□ -1.22
CTDP1Q9Y5B0 IFNG-AS1-203ENST00000541715 902 ntTSL 3 BASIC7.44□□□□□ -1.22
CTDP1Q9Y5B0 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC7.44□□□□□ -1.22
CTDP1Q9Y5B0 TPRX1P1-201ENST00000557620 319 ntBASIC7.44□□□□□ -1.22
CTDP1Q9Y5B0 AC103740.1-202ENST00000558404 542 ntTSL 4 BASIC7.44□□□□□ -1.22
CTDP1Q9Y5B0 AC011468.3-201ENST00000597886 332 ntTSL 3 BASIC7.44□□□□□ -1.22
CTDP1Q9Y5B0 AC022387.2-201ENST00000604050 448 ntBASIC7.44□□□□□ -1.22
CTDP1Q9Y5B0 BNIP3P31-201ENST00000604515 566 ntBASIC7.44□□□□□ -1.22
CTDP1Q9Y5B0 AC015849.6-201ENST00000605454 474 ntBASIC7.44□□□□□ -1.22
CTDP1Q9Y5B0 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC7.44□□□□□ -1.22
CTDP1Q9Y5B0 AC092681.3-201ENST00000609463 678 ntBASIC7.44□□□□□ -1.22
CTDP1Q9Y5B0 AC008833.1-201ENST00000611633 691 ntBASIC7.44□□□□□ -1.22
CTDP1Q9Y5B0 OR1N1-202ENST00000619659 939 ntBASIC7.44□□□□□ -1.22
CTDP1Q9Y5B0 MTCO1P1-201ENST00000624263 1081 ntBASIC7.44□□□□□ -1.22
CTDP1Q9Y5B0 AC079298.3-201ENST00000624941 977 ntTSL 3 BASIC7.44□□□□□ -1.22
CTDP1Q9Y5B0 LINC00598-209ENST00000635966 1148 ntTSL 5 BASIC7.44□□□□□ -1.22
CTDP1Q9Y5B0 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC7.44□□□□□ -1.22
CTDP1Q9Y5B0 OR6C71P-202ENST00000641886 1107 ntBASIC7.44□□□□□ -1.22
CTDP1Q9Y5B0 SMG1-201ENST00000330588 1588 ntTSL 5 BASIC7.44□□□□□ -1.22
CTDP1Q9Y5B0 HYDIN-215ENST00000541601 3058 ntAPPRIS ALT2 TSL 2 BASIC7.44□□□□□ -1.22
CTDP1Q9Y5B0 AC087430.1-201ENST00000451707 3699 ntTSL 2 BASIC7.44□□□□□ -1.22
CTDP1Q9Y5B0 ASNSP6-201ENST00000592770 1618 ntBASIC7.44□□□□□ -1.22
CTDP1Q9Y5B0 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
CTDP1Q9Y5B0 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
CTDP1Q9Y5B0 TRIM34-201ENST00000429814 2311 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
CTDP1Q9Y5B0 NCOR1-201ENST00000268712 10720 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
CTDP1Q9Y5B0 NRXN1-248ENST00000636345 3595 ntTSL 5 BASIC7.44□□□□□ -1.22
CTDP1Q9Y5B0 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC7.44□□□□□ -1.22
CTDP1Q9Y5B0 HSDL2-201ENST00000398803 2983 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
CTDP1Q9Y5B0 DMTF1-213ENST00000432937 2411 ntTSL 2 BASIC7.43□□□□□ -1.22
CTDP1Q9Y5B0 C14orf105-201ENST00000216445 3082 ntAPPRIS P3 TSL 1 (best) BASIC7.43□□□□□ -1.22
CTDP1Q9Y5B0 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC7.43□□□□□ -1.22
CTDP1Q9Y5B0 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC7.43□□□□□ -1.22
CTDP1Q9Y5B0 FGF10-201ENST00000264664 2193 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
CTDP1Q9Y5B0 L3MBTL3-201ENST00000361794 4217 ntAPPRIS P4 TSL 5 BASIC7.43□□□□□ -1.22
CTDP1Q9Y5B0 STAMBPL1-201ENST00000371922 1899 ntTSL 2 BASIC7.43□□□□□ -1.22
CTDP1Q9Y5B0 PRUNE1-202ENST00000368934 2214 ntTSL 2 BASIC7.43□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 90.2 ms