Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC7.29□□□□□ -1.24
UPF3BQ9BZI7 AL358612.1-201ENST00000452911 481 ntTSL 3 BASIC7.29□□□□□ -1.24
UPF3BQ9BZI7 AC117500.1-201ENST00000497352 755 ntBASIC7.29□□□□□ -1.24
UPF3BQ9BZI7 AC104109.1-201ENST00000498563 436 ntBASIC7.29□□□□□ -1.24
UPF3BQ9BZI7 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC7.29□□□□□ -1.24
UPF3BQ9BZI7 KHDC1P1-201ENST00000511053 508 ntBASIC7.29□□□□□ -1.24
UPF3BQ9BZI7 KLRC1-204ENST00000536188 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC7.29□□□□□ -1.24
UPF3BQ9BZI7 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC7.29□□□□□ -1.24
UPF3BQ9BZI7 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC7.29□□□□□ -1.24
UPF3BQ9BZI7 AL162511.1-201ENST00000556542 879 ntTSL 4 BASIC7.29□□□□□ -1.24
UPF3BQ9BZI7 AC005632.2-201ENST00000564271 828 ntBASIC7.29□□□□□ -1.24
UPF3BQ9BZI7 AC020915.3-201ENST00000595301 550 ntTSL 5 BASIC7.29□□□□□ -1.24
UPF3BQ9BZI7 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC7.29□□□□□ -1.24
UPF3BQ9BZI7 RPSAP75-201ENST00000605848 301 ntBASIC7.29□□□□□ -1.24
UPF3BQ9BZI7 AC141002.1-201ENST00000607025 279 ntBASIC7.29□□□□□ -1.24
UPF3BQ9BZI7 U1.25-201ENST00000614085 162 ntBASIC7.29□□□□□ -1.24
UPF3BQ9BZI7 uc_338.31-201ENST00000615595 186 ntBASIC7.29□□□□□ -1.24
UPF3BQ9BZI7 U1.34-201ENST00000618578 162 ntBASIC7.29□□□□□ -1.24
UPF3BQ9BZI7 U1.31-201ENST00000620022 160 ntBASIC7.29□□□□□ -1.24
UPF3BQ9BZI7 AC119674.1-202ENST00000641333 1860 ntBASIC7.29□□□□□ -1.24
UPF3BQ9BZI7 NLN-202ENST00000502464 8354 ntTSL 5 BASIC7.29□□□□□ -1.24
UPF3BQ9BZI7 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
UPF3BQ9BZI7 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC7.29□□□□□ -1.24
UPF3BQ9BZI7 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC7.29□□□□□ -1.24
UPF3BQ9BZI7 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC7.29□□□□□ -1.24
UPF3BQ9BZI7 AP002478.1-201ENST00000577848 1455 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
UPF3BQ9BZI7 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC7.29□□□□□ -1.24
UPF3BQ9BZI7 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC7.29□□□□□ -1.24
UPF3BQ9BZI7 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC7.29□□□□□ -1.24
UPF3BQ9BZI7 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
UPF3BQ9BZI7 PLN-201ENST00000357525 2001 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
UPF3BQ9BZI7 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
UPF3BQ9BZI7 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC7.28□□□□□ -1.24
UPF3BQ9BZI7 LINC01613-201ENST00000561476 2780 ntBASIC7.28□□□□□ -1.24
UPF3BQ9BZI7 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC7.28□□□□□ -1.24
UPF3BQ9BZI7 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
UPF3BQ9BZI7 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC7.28□□□□□ -1.24
UPF3BQ9BZI7 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
UPF3BQ9BZI7 SNORA70.9-201ENST00000384370 135 ntBASIC7.28□□□□□ -1.24
UPF3BQ9BZI7 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC7.28□□□□□ -1.24
UPF3BQ9BZI7 RN7SKP206-201ENST00000410823 293 ntBASIC7.28□□□□□ -1.24
UPF3BQ9BZI7 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC7.28□□□□□ -1.24
UPF3BQ9BZI7 LYPLA1P1-201ENST00000434514 622 ntBASIC7.28□□□□□ -1.24
UPF3BQ9BZI7 AC114728.1-201ENST00000488289 483 ntBASIC7.28□□□□□ -1.24
UPF3BQ9BZI7 AC108941.2-201ENST00000506796 716 ntAPPRIS P1 TSL 5 BASIC7.28□□□□□ -1.24
UPF3BQ9BZI7 AC008429.4-201ENST00000521201 182 ntBASIC7.28□□□□□ -1.24
UPF3BQ9BZI7 TPM3P3-201ENST00000521343 354 ntBASIC7.28□□□□□ -1.24
UPF3BQ9BZI7 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC7.28□□□□□ -1.24
UPF3BQ9BZI7 AL132989.1-201ENST00000557322 576 ntTSL 3 BASIC7.28□□□□□ -1.24
UPF3BQ9BZI7 MIR6811-201ENST00000620409 58 ntBASIC7.28□□□□□ -1.24
UPF3BQ9BZI7 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC7.28□□□□□ -1.24
UPF3BQ9BZI7 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC7.28□□□□□ -1.24
UPF3BQ9BZI7 ATP13A4-204ENST00000400270 1458 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
UPF3BQ9BZI7 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC7.28□□□□□ -1.24
UPF3BQ9BZI7 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC7.28□□□□□ -1.24
UPF3BQ9BZI7 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC7.28□□□□□ -1.24
UPF3BQ9BZI7 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC7.28□□□□□ -1.24
UPF3BQ9BZI7 DCN-218ENST00000551354 2924 ntTSL 3 BASIC7.28□□□□□ -1.24
UPF3BQ9BZI7 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC7.27□□□□□ -1.24
UPF3BQ9BZI7 AP002833.3-201ENST00000625075 2265 ntBASIC7.27□□□□□ -1.24
UPF3BQ9BZI7 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.24
UPF3BQ9BZI7 MARK2P4-201ENST00000503381 2380 ntBASIC7.27□□□□□ -1.24
UPF3BQ9BZI7 CPEB2-AS1-202ENST00000501916 1806 ntTSL 2 BASIC7.27□□□□□ -1.25
UPF3BQ9BZI7 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
UPF3BQ9BZI7 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC7.27□□□□□ -1.25
UPF3BQ9BZI7 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
UPF3BQ9BZI7 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC7.27□□□□□ -1.25
UPF3BQ9BZI7 RNA5-8SP5-201ENST00000365304 152 ntBASIC7.27□□□□□ -1.25
UPF3BQ9BZI7 RNA5SP279-201ENST00000365513 117 ntBASIC7.27□□□□□ -1.25
UPF3BQ9BZI7 IGLV3-16-201ENST00000390311 385 ntAPPRIS P1 BASIC7.27□□□□□ -1.25
UPF3BQ9BZI7 RPS26P38-201ENST00000414476 348 ntBASIC7.27□□□□□ -1.25
UPF3BQ9BZI7 RPL23AP18-201ENST00000416139 468 ntBASIC7.27□□□□□ -1.25
UPF3BQ9BZI7 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC7.27□□□□□ -1.25
UPF3BQ9BZI7 AC007679.3-201ENST00000434035 414 ntBASIC7.27□□□□□ -1.25
UPF3BQ9BZI7 HNRNPDLP2-201ENST00000455248 751 ntBASIC7.27□□□□□ -1.25
UPF3BQ9BZI7 PFN2-209ENST00000481275 560 ntTSL 4 BASIC7.27□□□□□ -1.25
UPF3BQ9BZI7 OCIAD1-216ENST00000509122 1204 ntTSL 5 BASIC7.27□□□□□ -1.25
UPF3BQ9BZI7 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC7.27□□□□□ -1.25
UPF3BQ9BZI7 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC7.27□□□□□ -1.25
UPF3BQ9BZI7 CYP4F27P-201ENST00000514557 494 ntBASIC7.27□□□□□ -1.25
UPF3BQ9BZI7 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC7.27□□□□□ -1.25
UPF3BQ9BZI7 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC7.27□□□□□ -1.25
UPF3BQ9BZI7 OR4A6P-201ENST00000534364 970 ntBASIC7.27□□□□□ -1.25
UPF3BQ9BZI7 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC7.27□□□□□ -1.25
UPF3BQ9BZI7 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
UPF3BQ9BZI7 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC7.27□□□□□ -1.25
UPF3BQ9BZI7 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC7.27□□□□□ -1.25
UPF3BQ9BZI7 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC7.27□□□□□ -1.25
UPF3BQ9BZI7 AL138895.2-201ENST00000603019 178 ntBASIC7.27□□□□□ -1.25
UPF3BQ9BZI7 SNORA74.4-201ENST00000607595 199 ntBASIC7.27□□□□□ -1.25
UPF3BQ9BZI7 AC069234.4-201ENST00000621276 412 ntBASIC7.27□□□□□ -1.25
UPF3BQ9BZI7 LINC01676-209ENST00000623043 896 ntTSL 4 BASIC7.27□□□□□ -1.25
UPF3BQ9BZI7 AL109924.4-201ENST00000623089 670 ntBASIC7.27□□□□□ -1.25
UPF3BQ9BZI7 LINC01435-220ENST00000630847 714 ntTSL 5 BASIC7.27□□□□□ -1.25
UPF3BQ9BZI7 DMD-228ENST00000541735 7080 ntTSL 5 BASIC7.27□□□□□ -1.25
UPF3BQ9BZI7 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC7.27□□□□□ -1.25
UPF3BQ9BZI7 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
UPF3BQ9BZI7 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC7.27□□□□□ -1.25
UPF3BQ9BZI7 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC7.27□□□□□ -1.25
UPF3BQ9BZI7 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 97.5 ms