Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
HDHD3Q9BSH5 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
HDHD3Q9BSH5 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
HDHD3Q9BSH5 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
HDHD3Q9BSH5 RPL17-C18orf32-203ENST00000584895 1440 ntAPPRIS P1 TSL 3 BASIC5.04□□□□□ -1.6
HDHD3Q9BSH5 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC5.04□□□□□ -1.6
HDHD3Q9BSH5 PLN-201ENST00000357525 2001 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
HDHD3Q9BSH5 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
HDHD3Q9BSH5 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC5.04□□□□□ -1.6
HDHD3Q9BSH5 THAP12P9-201ENST00000503971 2360 ntBASIC5.04□□□□□ -1.6
HDHD3Q9BSH5 AC130304.1-201ENST00000622942 2385 ntBASIC5.04□□□□□ -1.6
HDHD3Q9BSH5 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC5.04□□□□□ -1.6
HDHD3Q9BSH5 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
HDHD3Q9BSH5 AC140134.1-201ENST00000511830 3544 ntBASIC5.03□□□□□ -1.6
HDHD3Q9BSH5 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
HDHD3Q9BSH5 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC5.03□□□□□ -1.6
HDHD3Q9BSH5 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
HDHD3Q9BSH5 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
HDHD3Q9BSH5 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
HDHD3Q9BSH5 UGDH-205ENST00000506179 3021 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
HDHD3Q9BSH5 AC026523.2-201ENST00000625039 7739 ntBASIC5.03□□□□□ -1.6
HDHD3Q9BSH5 AC068389.1-202ENST00000526470 3564 ntTSL 2 BASIC5.03□□□□□ -1.6
HDHD3Q9BSH5 AL035665.1-201ENST00000428495 1669 ntTSL 3 BASIC5.03□□□□□ -1.6
HDHD3Q9BSH5 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
HDHD3Q9BSH5 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC5.03□□□□□ -1.6
HDHD3Q9BSH5 TCEAL8-201ENST00000360000 1131 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
HDHD3Q9BSH5 SNORA64.3-201ENST00000365647 134 ntBASIC5.03□□□□□ -1.6
HDHD3Q9BSH5 FCGR1B-202ENST00000369383 570 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
HDHD3Q9BSH5 SAMD13-203ENST00000370670 565 ntAPPRIS P1 TSL 4 BASIC5.03□□□□□ -1.6
HDHD3Q9BSH5 PSMD10-206ENST00000372296 878 ntTSL 5 BASIC5.03□□□□□ -1.6
HDHD3Q9BSH5 TCEAL8-202ENST00000372685 1222 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
HDHD3Q9BSH5 SNX24-202ENST00000395451 1050 ntTSL 3 BASIC5.03□□□□□ -1.6
HDHD3Q9BSH5 RNA5SP156-201ENST00000410250 110 ntBASIC5.03□□□□□ -1.6
HDHD3Q9BSH5 AC104463.1-201ENST00000411431 365 ntTSL 5 BASIC5.03□□□□□ -1.6
HDHD3Q9BSH5 EMX2OS-201ENST00000412075 1025 ntTSL 2 BASIC5.03□□□□□ -1.6
HDHD3Q9BSH5 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC5.03□□□□□ -1.6
HDHD3Q9BSH5 MYL6P5-201ENST00000412707 459 ntBASIC5.03□□□□□ -1.6
HDHD3Q9BSH5 AC007966.1-201ENST00000421998 1179 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
HDHD3Q9BSH5 AC010086.1-201ENST00000437359 1052 ntBASIC5.03□□□□□ -1.6
HDHD3Q9BSH5 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC5.03□□□□□ -1.6
HDHD3Q9BSH5 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC5.03□□□□□ -1.6
HDHD3Q9BSH5 WDR82P2-201ENST00000444540 928 ntBASIC5.03□□□□□ -1.6
HDHD3Q9BSH5 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC5.03□□□□□ -1.6
HDHD3Q9BSH5 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
HDHD3Q9BSH5 RN7SL502P-201ENST00000481857 290 ntBASIC5.03□□□□□ -1.6
HDHD3Q9BSH5 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC5.03□□□□□ -1.6
HDHD3Q9BSH5 AC090958.1-201ENST00000511122 351 ntBASIC5.03□□□□□ -1.6
HDHD3Q9BSH5 IGKV1OR22-1-201ENST00000521497 360 ntBASIC5.03□□□□□ -1.6
HDHD3Q9BSH5 AC079015.1-201ENST00000521793 596 ntTSL 2 BASIC5.03□□□□□ -1.6
HDHD3Q9BSH5 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC5.03□□□□□ -1.6
HDHD3Q9BSH5 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC5.03□□□□□ -1.6
HDHD3Q9BSH5 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC5.03□□□□□ -1.6
HDHD3Q9BSH5 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC5.03□□□□□ -1.6
HDHD3Q9BSH5 AC009237.12-201ENST00000604755 742 ntBASIC5.03□□□□□ -1.6
HDHD3Q9BSH5 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC5.03□□□□□ -1.6
HDHD3Q9BSH5 GAPDHP41-201ENST00000613707 975 ntBASIC5.03□□□□□ -1.6
HDHD3Q9BSH5 AC089999.3-201ENST00000622440 577 ntBASIC5.03□□□□□ -1.6
HDHD3Q9BSH5 AC079298.3-201ENST00000624941 977 ntTSL 3 BASIC5.03□□□□□ -1.6
HDHD3Q9BSH5 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC5.03□□□□□ -1.6
HDHD3Q9BSH5 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
HDHD3Q9BSH5 SLC10A7-204ENST00000502607 1638 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
HDHD3Q9BSH5 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
HDHD3Q9BSH5 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
HDHD3Q9BSH5 AC123769.1-201ENST00000530992 3192 ntBASIC5.03□□□□□ -1.6
HDHD3Q9BSH5 ZCCHC6-204ENST00000375957 2262 ntTSL 2 BASIC5.03□□□□□ -1.6
HDHD3Q9BSH5 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
HDHD3Q9BSH5 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
HDHD3Q9BSH5 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
HDHD3Q9BSH5 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
HDHD3Q9BSH5 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC5.02□□□□□ -1.61
HDHD3Q9BSH5 AC126755.2-201ENST00000545114 1522 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
HDHD3Q9BSH5 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC5.02□□□□□ -1.61
HDHD3Q9BSH5 INHBA-AS1-203ENST00000422822 2312 ntTSL 2 BASIC5.02□□□□□ -1.61
HDHD3Q9BSH5 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
HDHD3Q9BSH5 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC5.02□□□□□ -1.61
HDHD3Q9BSH5 RN7SKP128-201ENST00000364270 303 ntBASIC5.02□□□□□ -1.61
HDHD3Q9BSH5 NUDT5-203ENST00000378940 1126 ntTSL 5 BASIC5.02□□□□□ -1.61
HDHD3Q9BSH5 PLGLB1-202ENST00000409310 960 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
HDHD3Q9BSH5 RPS7P8-201ENST00000418311 581 ntBASIC5.02□□□□□ -1.61
HDHD3Q9BSH5 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC5.02□□□□□ -1.61
HDHD3Q9BSH5 NMD3P2-201ENST00000421815 761 ntBASIC5.02□□□□□ -1.61
HDHD3Q9BSH5 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC5.02□□□□□ -1.61
HDHD3Q9BSH5 LDHAP2-201ENST00000437325 985 ntBASIC5.02□□□□□ -1.61
HDHD3Q9BSH5 AL645936.1-201ENST00000441979 518 ntBASIC5.02□□□□□ -1.61
HDHD3Q9BSH5 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC5.02□□□□□ -1.61
HDHD3Q9BSH5 RPS18P1-201ENST00000447840 458 ntBASIC5.02□□□□□ -1.61
HDHD3Q9BSH5 AC016027.4-201ENST00000450866 277 ntBASIC5.02□□□□□ -1.61
HDHD3Q9BSH5 RPL12P39-201ENST00000455456 496 ntBASIC5.02□□□□□ -1.61
HDHD3Q9BSH5 RN7SL836P-201ENST00000476140 296 ntBASIC5.02□□□□□ -1.61
HDHD3Q9BSH5 RPL38P3-201ENST00000484463 213 ntBASIC5.02□□□□□ -1.61
HDHD3Q9BSH5 RN7SL284P-201ENST00000498823 275 ntBASIC5.02□□□□□ -1.61
HDHD3Q9BSH5 AC095052.1-201ENST00000509955 863 ntBASIC5.02□□□□□ -1.61
HDHD3Q9BSH5 WDFY3-AS1-201ENST00000510449 493 ntTSL 3 BASIC5.02□□□□□ -1.61
HDHD3Q9BSH5 SNORA81.2-201ENST00000516868 170 ntBASIC5.02□□□□□ -1.61
HDHD3Q9BSH5 IGHV7-34-1-201ENST00000519200 350 ntBASIC5.02□□□□□ -1.61
HDHD3Q9BSH5 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC5.02□□□□□ -1.61
HDHD3Q9BSH5 AC104248.1-201ENST00000522244 481 ntTSL 3 BASIC5.02□□□□□ -1.61
HDHD3Q9BSH5 AC090424.1-201ENST00000535243 736 ntBASIC5.02□□□□□ -1.61
HDHD3Q9BSH5 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC5.02□□□□□ -1.61
HDHD3Q9BSH5 BICD1-206ENST00000551086 423 ntTSL 3 BASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 74.4 ms