Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 AC069208.1-201ENST00000540811 676 ntTSL 4 BASIC6.83□□□□□ -1.32
CDK5RAP1Q96SZ6 RN7SL230P-201ENST00000580835 303 ntBASIC6.83□□□□□ -1.32
CDK5RAP1Q96SZ6 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC6.83□□□□□ -1.32
CDK5RAP1Q96SZ6 AC020765.1-201ENST00000604296 328 ntBASIC6.83□□□□□ -1.32
CDK5RAP1Q96SZ6 AC019257.2-201ENST00000605539 497 ntBASIC6.83□□□□□ -1.32
CDK5RAP1Q96SZ6 AL356608.1-201ENST00000610034 820 ntBASIC6.83□□□□□ -1.32
CDK5RAP1Q96SZ6 DUXAP10-204ENST00000612052 616 ntBASIC6.83□□□□□ -1.32
CDK5RAP1Q96SZ6 MIR6889-201ENST00000613185 59 ntBASIC6.83□□□□□ -1.32
CDK5RAP1Q96SZ6 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC6.83□□□□□ -1.32
CDK5RAP1Q96SZ6 CNTNAP3P1-201ENST00000616657 906 ntBASIC6.83□□□□□ -1.32
CDK5RAP1Q96SZ6 MIR6085-201ENST00000618314 110 ntBASIC6.83□□□□□ -1.32
CDK5RAP1Q96SZ6 AC074276.2-201ENST00000619891 348 ntBASIC6.83□□□□□ -1.32
CDK5RAP1Q96SZ6 AL162233.1-201ENST00000620014 944 ntBASIC6.83□□□□□ -1.32
CDK5RAP1Q96SZ6 AP003497.2-201ENST00000624220 967 ntBASIC6.83□□□□□ -1.32
CDK5RAP1Q96SZ6 AL512506.2-201ENST00000624472 458 ntBASIC6.83□□□□□ -1.32
CDK5RAP1Q96SZ6 TTN-AS1-268ENST00000629094 604 ntTSL 5 BASIC6.83□□□□□ -1.32
CDK5RAP1Q96SZ6 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC6.83□□□□□ -1.32
CDK5RAP1Q96SZ6 AC073488.9-201ENST00000631601 754 ntBASIC6.83□□□□□ -1.32
CDK5RAP1Q96SZ6 TMEM30CP-203ENST00000637814 1035 ntBASIC6.83□□□□□ -1.32
CDK5RAP1Q96SZ6 ZNF780A-203ENST00000450241 7500 ntTSL 2 BASIC6.83□□□□□ -1.32
CDK5RAP1Q96SZ6 ZNF571-205ENST00000590751 1700 ntTSL 2 BASIC6.83□□□□□ -1.32
CDK5RAP1Q96SZ6 CYP3A5-202ENST00000339843 3320 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
CDK5RAP1Q96SZ6 GJA9-202ENST00000360786 1901 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
CDK5RAP1Q96SZ6 SLC14A1-208ENST00000586142 2846 ntAPPRIS P3 TSL 1 (best) BASIC6.83□□□□□ -1.32
CDK5RAP1Q96SZ6 NRCAM-202ENST00000379022 3900 ntTSL 5 BASIC6.83□□□□□ -1.32
CDK5RAP1Q96SZ6 AC007402.1-201ENST00000440698 3939 ntTSL 2 BASIC6.83□□□□□ -1.32
CDK5RAP1Q96SZ6 AC062022.1-201ENST00000451026 1684 ntBASIC6.83□□□□□ -1.32
CDK5RAP1Q96SZ6 CASC19-228ENST00000641414 1684 ntBASIC6.83□□□□□ -1.32
CDK5RAP1Q96SZ6 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC6.83□□□□□ -1.32
CDK5RAP1Q96SZ6 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC6.83□□□□□ -1.32
CDK5RAP1Q96SZ6 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC6.83□□□□□ -1.32
CDK5RAP1Q96SZ6 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
CDK5RAP1Q96SZ6 ZNF214-204ENST00000536068 2562 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
CDK5RAP1Q96SZ6 AC018717.1-201ENST00000457712 1505 ntBASIC6.82□□□□□ -1.32
CDK5RAP1Q96SZ6 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
CDK5RAP1Q96SZ6 TATDN2P3-201ENST00000452855 3665 ntBASIC6.82□□□□□ -1.32
CDK5RAP1Q96SZ6 MAK-205ENST00000538030 2459 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
CDK5RAP1Q96SZ6 OR1Q1-201ENST00000297913 945 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
CDK5RAP1Q96SZ6 SCGB1D4-201ENST00000358585 439 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
CDK5RAP1Q96SZ6 FCGR1B-202ENST00000369383 570 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
CDK5RAP1Q96SZ6 PRPS1-202ENST00000372419 628 ntTSL 2 BASIC6.82□□□□□ -1.32
CDK5RAP1Q96SZ6 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
CDK5RAP1Q96SZ6 EEF1AKMT1-201ENST00000382754 875 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
CDK5RAP1Q96SZ6 RNU6-883P-201ENST00000384597 107 ntBASIC6.82□□□□□ -1.32
CDK5RAP1Q96SZ6 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC6.82□□□□□ -1.32
CDK5RAP1Q96SZ6 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC6.82□□□□□ -1.32
CDK5RAP1Q96SZ6 TRGV5P-201ENST00000419915 354 ntBASIC6.82□□□□□ -1.32
CDK5RAP1Q96SZ6 RPL23AP85-201ENST00000421838 433 ntBASIC6.82□□□□□ -1.32
CDK5RAP1Q96SZ6 TXNL1P1-201ENST00000429528 554 ntBASIC6.82□□□□□ -1.32
CDK5RAP1Q96SZ6 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
CDK5RAP1Q96SZ6 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
CDK5RAP1Q96SZ6 AC069540.1-201ENST00000446320 988 ntBASIC6.82□□□□□ -1.32
CDK5RAP1Q96SZ6 YRDCP3-201ENST00000456507 480 ntBASIC6.82□□□□□ -1.32
CDK5RAP1Q96SZ6 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC6.82□□□□□ -1.32
CDK5RAP1Q96SZ6 AC121161.1-201ENST00000510606 652 ntBASIC6.82□□□□□ -1.32
CDK5RAP1Q96SZ6 AC093664.1-201ENST00000511779 289 ntBASIC6.82□□□□□ -1.32
CDK5RAP1Q96SZ6 SNORA74.1-201ENST00000516320 180 ntBASIC6.82□□□□□ -1.32
CDK5RAP1Q96SZ6 AC110011.1-201ENST00000518260 582 ntTSL 3 BASIC6.82□□□□□ -1.32
CDK5RAP1Q96SZ6 IGHV3-57-201ENST00000520143 280 ntBASIC6.82□□□□□ -1.32
CDK5RAP1Q96SZ6 IGLV3-6-201ENST00000523937 250 ntBASIC6.82□□□□□ -1.32
CDK5RAP1Q96SZ6 C1DP5-201ENST00000525775 383 ntBASIC6.82□□□□□ -1.32
CDK5RAP1Q96SZ6 MTATP6P15-201ENST00000527233 835 ntBASIC6.82□□□□□ -1.32
CDK5RAP1Q96SZ6 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC6.82□□□□□ -1.32
CDK5RAP1Q96SZ6 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC6.82□□□□□ -1.32
CDK5RAP1Q96SZ6 AP000851.1-202ENST00000542119 743 ntTSL 3 BASIC6.82□□□□□ -1.32
CDK5RAP1Q96SZ6 RPL41P2-201ENST00000544920 409 ntBASIC6.82□□□□□ -1.32
CDK5RAP1Q96SZ6 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
CDK5RAP1Q96SZ6 APAF1-211ENST00000552268 1143 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
CDK5RAP1Q96SZ6 AC087721.1-201ENST00000559959 476 ntTSL 5 BASIC6.82□□□□□ -1.32
CDK5RAP1Q96SZ6 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC6.82□□□□□ -1.32
CDK5RAP1Q96SZ6 AC026898.1-201ENST00000586404 571 ntBASIC6.82□□□□□ -1.32
CDK5RAP1Q96SZ6 AL049844.2-201ENST00000604280 628 ntBASIC6.82□□□□□ -1.32
CDK5RAP1Q96SZ6 MIR6823-201ENST00000622118 61 ntBASIC6.82□□□□□ -1.32
CDK5RAP1Q96SZ6 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC6.82□□□□□ -1.32
CDK5RAP1Q96SZ6 LINC00598-209ENST00000635966 1148 ntTSL 5 BASIC6.82□□□□□ -1.32
CDK5RAP1Q96SZ6 OR8A1-204ENST00000642111 1145 ntBASIC6.82□□□□□ -1.32
CDK5RAP1Q96SZ6 AL449283.1-201ENST00000602631 3403 ntBASIC6.82□□□□□ -1.32
CDK5RAP1Q96SZ6 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC6.82□□□□□ -1.32
CDK5RAP1Q96SZ6 GRIP1-202ENST00000398016 4888 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
CDK5RAP1Q96SZ6 HOXD8-202ENST00000429017 1608 ntTSL 2 BASIC6.82□□□□□ -1.32
CDK5RAP1Q96SZ6 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC6.82□□□□□ -1.32
CDK5RAP1Q96SZ6 PLCH1-206ENST00000494598 3525 ntTSL 5 BASIC6.82□□□□□ -1.32
CDK5RAP1Q96SZ6 MARCH6-201ENST00000274140 9569 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
CDK5RAP1Q96SZ6 NEDD9-216ENST00000620854 4086 ntTSL 5 BASIC6.82□□□□□ -1.32
CDK5RAP1Q96SZ6 AC008040.1-202ENST00000483289 6251 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
CDK5RAP1Q96SZ6 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC6.82□□□□□ -1.32
CDK5RAP1Q96SZ6 ZNF227-213ENST00000621083 3055 ntAPPRIS P1 TSL 2 BASIC6.82□□□□□ -1.32
CDK5RAP1Q96SZ6 BMP10-201ENST00000295379 1584 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
CDK5RAP1Q96SZ6 FO082842.1-201ENST00000423552 1370 ntBASIC6.82□□□□□ -1.32
CDK5RAP1Q96SZ6 SLF2-202ENST00000370269 3712 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
CDK5RAP1Q96SZ6 NUMB-201ENST00000355058 3342 ntAPPRIS ALT1 TSL 5 BASIC6.81□□□□□ -1.32
CDK5RAP1Q96SZ6 API5P1-201ENST00000424316 1510 ntBASIC6.81□□□□□ -1.32
CDK5RAP1Q96SZ6 LINC01613-201ENST00000561476 2780 ntBASIC6.81□□□□□ -1.32
CDK5RAP1Q96SZ6 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
CDK5RAP1Q96SZ6 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
CDK5RAP1Q96SZ6 EEF1A1P12-201ENST00000443590 1346 ntBASIC6.81□□□□□ -1.32
CDK5RAP1Q96SZ6 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC6.81□□□□□ -1.32
CDK5RAP1Q96SZ6 APOL4-203ENST00000352371 3227 ntAPPRIS P4 TSL 1 (best) BASIC6.81□□□□□ -1.32
CDK5RAP1Q96SZ6 PTK2-228ENST00000521059 4405 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
CDK5RAP1Q96SZ6 BORCS7-ASMT-201ENST00000299353 2670 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 84.3 ms