Protein–RNA interactions for Protein: Q96ST3

SIN3A, Paired amphipathic helix protein Sin3a, humanhuman

Predictions only

Length 1,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3AQ96ST3 AC068769.1-201ENST00000474767 2426 ntBASIC8.63□□□□□ -1.03
SIN3AQ96ST3 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC8.63□□□□□ -1.03
SIN3AQ96ST3 MDM4-207ENST00000454264 9926 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
SIN3AQ96ST3 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
SIN3AQ96ST3 ZNF969P-201ENST00000510345 2341 ntBASIC8.63□□□□□ -1.03
SIN3AQ96ST3 AL117339.4-201ENST00000608335 7063 ntBASIC8.62□□□□□ -1.03
SIN3AQ96ST3 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
SIN3AQ96ST3 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC8.62□□□□□ -1.03
SIN3AQ96ST3 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC8.62□□□□□ -1.03
SIN3AQ96ST3 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
SIN3AQ96ST3 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC8.62□□□□□ -1.03
SIN3AQ96ST3 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC8.62□□□□□ -1.03
SIN3AQ96ST3 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
SIN3AQ96ST3 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC8.62□□□□□ -1.03
SIN3AQ96ST3 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC8.62□□□□□ -1.03
SIN3AQ96ST3 OR2J1-201ENST00000377171 1273 ntAPPRIS P1 BASIC8.62□□□□□ -1.03
SIN3AQ96ST3 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC8.62□□□□□ -1.03
SIN3AQ96ST3 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC8.62□□□□□ -1.03
SIN3AQ96ST3 MYL6P5-201ENST00000412707 459 ntBASIC8.62□□□□□ -1.03
SIN3AQ96ST3 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC8.62□□□□□ -1.03
SIN3AQ96ST3 RPS4XP5-201ENST00000419038 768 ntBASIC8.62□□□□□ -1.03
SIN3AQ96ST3 BX284632.2-201ENST00000421091 399 ntBASIC8.62□□□□□ -1.03
SIN3AQ96ST3 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC8.62□□□□□ -1.03
SIN3AQ96ST3 FTO-202ENST00000431610 707 ntTSL 3 BASIC8.62□□□□□ -1.03
SIN3AQ96ST3 USP24P1-201ENST00000433802 779 ntBASIC8.62□□□□□ -1.03
SIN3AQ96ST3 AL512605.1-202ENST00000441919 381 ntBASIC8.62□□□□□ -1.03
SIN3AQ96ST3 CASP5-205ENST00000444749 1237 ntAPPRIS P1 TSL 2 BASIC8.62□□□□□ -1.03
SIN3AQ96ST3 AL359955.2-201ENST00000445380 353 ntBASIC8.62□□□□□ -1.03
SIN3AQ96ST3 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC8.62□□□□□ -1.03
SIN3AQ96ST3 AC093166.4-201ENST00000457867 318 ntBASIC8.62□□□□□ -1.03
SIN3AQ96ST3 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC8.62□□□□□ -1.03
SIN3AQ96ST3 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC8.62□□□□□ -1.03
SIN3AQ96ST3 CASP5-209ENST00000531367 879 ntTSL 5 BASIC8.62□□□□□ -1.03
SIN3AQ96ST3 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
SIN3AQ96ST3 TXNP4-201ENST00000575018 310 ntBASIC8.62□□□□□ -1.03
SIN3AQ96ST3 MIR4776-2-201ENST00000580204 80 ntBASIC8.62□□□□□ -1.03
SIN3AQ96ST3 AC005726.4-201ENST00000582858 458 ntBASIC8.62□□□□□ -1.03
SIN3AQ96ST3 AC090236.2-201ENST00000587933 1101 ntBASIC8.62□□□□□ -1.03
SIN3AQ96ST3 AC027243.2-201ENST00000602530 724 ntBASIC8.62□□□□□ -1.03
SIN3AQ96ST3 AC245014.3-201ENST00000618589 347 ntBASIC8.62□□□□□ -1.03
SIN3AQ96ST3 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC8.62□□□□□ -1.03
SIN3AQ96ST3 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC8.62□□□□□ -1.03
SIN3AQ96ST3 AL033543.1-201ENST00000623440 13454 ntBASIC8.62□□□□□ -1.03
SIN3AQ96ST3 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
SIN3AQ96ST3 CACNA1E-210ENST00000621791 16171 ntAPPRIS ALT2 TSL 1 (best) BASIC8.62□□□□□ -1.03
SIN3AQ96ST3 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
SIN3AQ96ST3 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC8.62□□□□□ -1.03
SIN3AQ96ST3 GAS1RR-201ENST00000415801 4387 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
SIN3AQ96ST3 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
SIN3AQ96ST3 KIAA0232-202ENST00000425103 7771 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
SIN3AQ96ST3 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC8.61□□□□□ -1.03
SIN3AQ96ST3 POLA1-202ENST00000379068 5486 ntAPPRIS ALT2 TSL 5 BASIC8.61□□□□□ -1.03
SIN3AQ96ST3 MDM4-204ENST00000367183 9098 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
SIN3AQ96ST3 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
SIN3AQ96ST3 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC8.61□□□□□ -1.03
SIN3AQ96ST3 NUP93-202ENST00000542526 8257 ntTSL 2 BASIC8.61□□□□□ -1.03
SIN3AQ96ST3 OR7E25P-201ENST00000344844 931 ntBASIC8.61□□□□□ -1.03
SIN3AQ96ST3 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC8.61□□□□□ -1.03
SIN3AQ96ST3 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC8.61□□□□□ -1.03
SIN3AQ96ST3 RPL12P24-201ENST00000474907 486 ntBASIC8.61□□□□□ -1.03
SIN3AQ96ST3 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC8.61□□□□□ -1.03
SIN3AQ96ST3 AC005224.3-201ENST00000584683 2140 ntBASIC8.61□□□□□ -1.03
SIN3AQ96ST3 MIR6793-201ENST00000612376 63 ntBASIC8.61□□□□□ -1.03
SIN3AQ96ST3 AL355974.3-201ENST00000617383 467 ntBASIC8.61□□□□□ -1.03
SIN3AQ96ST3 SNX18P12-201ENST00000624821 759 ntBASIC8.61□□□□□ -1.03
SIN3AQ96ST3 AC087269.2-201ENST00000641764 975 ntBASIC8.61□□□□□ -1.03
SIN3AQ96ST3 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC8.61□□□□□ -1.03
SIN3AQ96ST3 NCAPG2-202ENST00000409339 5253 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
SIN3AQ96ST3 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC8.61□□□□□ -1.03
SIN3AQ96ST3 SORBS1-205ENST00000371227 7279 ntAPPRIS ALT2 TSL 1 (best) BASIC8.61□□□□□ -1.03
SIN3AQ96ST3 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC8.61□□□□□ -1.03
SIN3AQ96ST3 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC8.61□□□□□ -1.03
SIN3AQ96ST3 ZRANB3-210ENST00000536680 6943 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
SIN3AQ96ST3 ETF1-203ENST00000503014 1736 ntTSL 2 BASIC8.6□□□□□ -1.03
SIN3AQ96ST3 FOXJ3-209ENST00000545068 5165 ntAPPRIS P3 TSL 5 BASIC8.6□□□□□ -1.03
SIN3AQ96ST3 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
SIN3AQ96ST3 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC8.6□□□□□ -1.03
SIN3AQ96ST3 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC8.6□□□□□ -1.03
SIN3AQ96ST3 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC8.6□□□□□ -1.03
SIN3AQ96ST3 AL355377.1-201ENST00000621125 1653 ntBASIC8.6□□□□□ -1.03
SIN3AQ96ST3 LINC01268-201ENST00000434296 2755 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
SIN3AQ96ST3 PPCS-201ENST00000372556 984 ntTSL 2 BASIC8.6□□□□□ -1.03
SIN3AQ96ST3 SUGT1P2-201ENST00000379452 992 ntBASIC8.6□□□□□ -1.03
SIN3AQ96ST3 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC8.6□□□□□ -1.03
SIN3AQ96ST3 OOSP1-201ENST00000398992 1270 ntBASIC8.6□□□□□ -1.03
SIN3AQ96ST3 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC8.6□□□□□ -1.03
SIN3AQ96ST3 AC099677.3-201ENST00000427081 395 ntBASIC8.6□□□□□ -1.03
SIN3AQ96ST3 AC007283.1-201ENST00000434645 445 ntTSL 5 BASIC8.6□□□□□ -1.03
SIN3AQ96ST3 AL663074.2-201ENST00000440621 479 ntBASIC8.6□□□□□ -1.03
SIN3AQ96ST3 UBFD1P1-201ENST00000473259 814 ntBASIC8.6□□□□□ -1.03
SIN3AQ96ST3 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC8.6□□□□□ -1.03
SIN3AQ96ST3 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC8.6□□□□□ -1.03
SIN3AQ96ST3 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC8.6□□□□□ -1.03
SIN3AQ96ST3 MIR2117-201ENST00000516780 80 ntBASIC8.6□□□□□ -1.03
SIN3AQ96ST3 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC8.6□□□□□ -1.03
SIN3AQ96ST3 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC8.6□□□□□ -1.03
SIN3AQ96ST3 KLRC1-204ENST00000536188 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC8.6□□□□□ -1.03
SIN3AQ96ST3 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC8.6□□□□□ -1.03
SIN3AQ96ST3 AC091078.2-201ENST00000557145 559 ntBASIC8.6□□□□□ -1.03
SIN3AQ96ST3 GARSP1-201ENST00000570895 719 ntBASIC8.6□□□□□ -1.03
Retrieved 100 of 98,524 protein–RNA pairs in 70.4 ms