Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 FBXL21-201ENST00000297158 1305 ntBASIC9.75□□□□□ -0.85
IFT140Q96RY7 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC9.75□□□□□ -0.85
IFT140Q96RY7 TP53BP1-203ENST00000382044 10384 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
IFT140Q96RY7 ZNF841-202ENST00000426391 3620 ntTSL 2 BASIC9.75□□□□□ -0.85
IFT140Q96RY7 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC9.75□□□□□ -0.85
IFT140Q96RY7 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC9.75□□□□□ -0.85
IFT140Q96RY7 CREM-217ENST00000439705 2306 ntTSL 5 BASIC9.75□□□□□ -0.85
IFT140Q96RY7 MAGT1-201ENST00000358075 4047 ntAPPRIS P2 TSL 1 (best) BASIC9.75□□□□□ -0.85
IFT140Q96RY7 TBC1D30-204ENST00000542120 7433 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
IFT140Q96RY7 ATP2B4-203ENST00000357681 8968 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
IFT140Q96RY7 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC9.74□□□□□ -0.85
IFT140Q96RY7 RNA5SP30-201ENST00000365552 115 ntBASIC9.74□□□□□ -0.85
IFT140Q96RY7 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC9.74□□□□□ -0.85
IFT140Q96RY7 RNA5SP339-201ENST00000390987 122 ntBASIC9.74□□□□□ -0.85
IFT140Q96RY7 AL390774.1-201ENST00000411924 246 ntBASIC9.74□□□□□ -0.85
IFT140Q96RY7 PGM5-AS1-202ENST00000420855 572 ntTSL 3 BASIC9.74□□□□□ -0.85
IFT140Q96RY7 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC9.74□□□□□ -0.85
IFT140Q96RY7 AL133465.1-201ENST00000432942 512 ntTSL 3 BASIC9.74□□□□□ -0.85
IFT140Q96RY7 PA2G4P6-201ENST00000438325 1197 ntBASIC9.74□□□□□ -0.85
IFT140Q96RY7 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC9.74□□□□□ -0.85
IFT140Q96RY7 RPL7P45-201ENST00000455851 743 ntBASIC9.74□□□□□ -0.85
IFT140Q96RY7 AC087672.1-201ENST00000479876 766 ntBASIC9.74□□□□□ -0.85
IFT140Q96RY7 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC9.74□□□□□ -0.85
IFT140Q96RY7 RNU6ATAC24P-201ENST00000516811 135 ntBASIC9.74□□□□□ -0.85
IFT140Q96RY7 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC9.74□□□□□ -0.85
IFT140Q96RY7 AC138811.1-201ENST00000569096 361 ntTSL 3 BASIC9.74□□□□□ -0.85
IFT140Q96RY7 GARSP1-201ENST00000570895 719 ntBASIC9.74□□□□□ -0.85
IFT140Q96RY7 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC9.74□□□□□ -0.85
IFT140Q96RY7 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC9.74□□□□□ -0.85
IFT140Q96RY7 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC9.74□□□□□ -0.85
IFT140Q96RY7 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC9.74□□□□□ -0.85
IFT140Q96RY7 IGLCOR22-2-201ENST00000605398 313 ntBASIC9.74□□□□□ -0.85
IFT140Q96RY7 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
IFT140Q96RY7 OXCT1-206ENST00000512084 1593 ntTSL 2 BASIC9.74□□□□□ -0.85
IFT140Q96RY7 SLC35F1-202ENST00000621341 4481 ntAPPRIS ALT2 TSL 5 BASIC9.74□□□□□ -0.85
IFT140Q96RY7 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC9.74□□□□□ -0.85
IFT140Q96RY7 CARF-202ENST00000402905 5938 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
IFT140Q96RY7 FAM135B-204ENST00000395297 6962 ntAPPRIS P1 TSL 5 BASIC9.74□□□□□ -0.85
IFT140Q96RY7 AC137056.2-201ENST00000624055 1958 ntBASIC9.74□□□□□ -0.85
IFT140Q96RY7 ZNF571-205ENST00000590751 1700 ntTSL 2 BASIC9.74□□□□□ -0.85
IFT140Q96RY7 AC068189.1-201ENST00000501164 2632 ntTSL 2 BASIC9.74□□□□□ -0.85
IFT140Q96RY7 APOL4-203ENST00000352371 3227 ntAPPRIS P4 TSL 1 (best) BASIC9.74□□□□□ -0.85
IFT140Q96RY7 HOOK3-201ENST00000307602 14398 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
IFT140Q96RY7 FRY-207ENST00000542859 13200 ntAPPRIS P1 TSL 5 BASIC9.74□□□□□ -0.85
IFT140Q96RY7 NEDD4L-204ENST00000382850 8251 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
IFT140Q96RY7 API5-210ENST00000534600 1760 ntTSL 5 BASIC9.74□□□□□ -0.85
IFT140Q96RY7 FARP1-219ENST00000596580 13532 ntTSL 5 BASIC9.73□□□□□ -0.85
IFT140Q96RY7 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
IFT140Q96RY7 RNU1-77P-201ENST00000390868 162 ntBASIC9.73□□□□□ -0.85
IFT140Q96RY7 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC9.73□□□□□ -0.85
IFT140Q96RY7 RN7SL346P-201ENST00000491561 294 ntBASIC9.73□□□□□ -0.85
IFT140Q96RY7 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC9.73□□□□□ -0.85
IFT140Q96RY7 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC9.73□□□□□ -0.85
IFT140Q96RY7 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC9.73□□□□□ -0.85
IFT140Q96RY7 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
IFT140Q96RY7 AF230666.2-201ENST00000602328 725 ntBASIC9.73□□□□□ -0.85
IFT140Q96RY7 uc_338.26-201ENST00000612659 160 ntBASIC9.73□□□□□ -0.85
IFT140Q96RY7 AC091953.3-201ENST00000623220 236 ntBASIC9.73□□□□□ -0.85
IFT140Q96RY7 SAMMSON-209ENST00000641222 1100 ntBASIC9.73□□□□□ -0.85
IFT140Q96RY7 HSD17B4-212ENST00000509514 2314 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
IFT140Q96RY7 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
IFT140Q96RY7 Z99129.3-201ENST00000624363 6430 ntTSL 2 BASIC9.73□□□□□ -0.85
IFT140Q96RY7 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
IFT140Q96RY7 TGFBR3-202ENST00000370399 4550 ntAPPRIS ALT1 TSL 1 (best) BASIC9.73□□□□□ -0.85
IFT140Q96RY7 AC009166.2-201ENST00000624410 2833 ntBASIC9.73□□□□□ -0.85
IFT140Q96RY7 AL161912.4-201ENST00000623889 2468 ntBASIC9.73□□□□□ -0.85
IFT140Q96RY7 ZNF407-207ENST00000582337 5662 ntTSL 5 BASIC9.73□□□□□ -0.85
IFT140Q96RY7 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
IFT140Q96RY7 ZFX-204ENST00000379188 7513 ntTSL 5 BASIC9.73□□□□□ -0.85
IFT140Q96RY7 WDR19-207ENST00000506503 2513 ntTSL 2 BASIC9.73□□□□□ -0.85
IFT140Q96RY7 PGR-202ENST00000325455 13748 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
IFT140Q96RY7 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC9.73□□□□□ -0.85
IFT140Q96RY7 ADAM7-204ENST00000520720 1870 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
IFT140Q96RY7 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC9.73□□□□□ -0.85
IFT140Q96RY7 TTI1-202ENST00000373448 3958 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
IFT140Q96RY7 GOLT1B-201ENST00000229314 3227 ntAPPRIS P2 TSL 1 (best) BASIC9.73□□□□□ -0.85
IFT140Q96RY7 ERRFI1-202ENST00000467067 2097 ntTSL 2 BASIC9.73□□□□□ -0.85
IFT140Q96RY7 MAP3K20-201ENST00000338983 7179 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
IFT140Q96RY7 OR2J1-201ENST00000377171 1273 ntAPPRIS P1 BASIC9.72□□□□□ -0.85
IFT140Q96RY7 RMRPP5-201ENST00000411156 267 ntBASIC9.72□□□□□ -0.85
IFT140Q96RY7 ZNF385D-AS1-201ENST00000412369 705 ntTSL 3 BASIC9.72□□□□□ -0.85
IFT140Q96RY7 RPS11P7-201ENST00000442125 465 ntBASIC9.72□□□□□ -0.85
IFT140Q96RY7 AC073610.1-201ENST00000489971 396 ntBASIC9.72□□□□□ -0.85
IFT140Q96RY7 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC9.72□□□□□ -0.85
IFT140Q96RY7 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC9.72□□□□□ -0.85
IFT140Q96RY7 OR11J2P-201ENST00000555298 907 ntBASIC9.72□□□□□ -0.85
IFT140Q96RY7 AC024255.1-201ENST00000614376 102 ntBASIC9.72□□□□□ -0.85
IFT140Q96RY7 AC006019.2-201ENST00000451116 3044 ntTSL 2 BASIC9.72□□□□□ -0.85
IFT140Q96RY7 CCDC73-203ENST00000531481 4381 ntAPPRIS ALT2 TSL 2 BASIC9.72□□□□□ -0.85
IFT140Q96RY7 MAPK10-377ENST00000642006 2752 ntBASIC9.72□□□□□ -0.85
IFT140Q96RY7 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC9.72□□□□□ -0.85
IFT140Q96RY7 QTRT2-212ENST00000485050 3844 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
IFT140Q96RY7 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
IFT140Q96RY7 CDON-201ENST00000263577 4186 ntAPPRIS P3 TSL 1 (best) BASIC9.72□□□□□ -0.85
IFT140Q96RY7 IGFN1-202ENST00000335211 11810 ntAPPRIS P2 TSL 5 BASIC9.72□□□□□ -0.85
IFT140Q96RY7 SMARCA2-252ENST00000636559 6853 ntTSL 2 BASIC9.72□□□□□ -0.85
IFT140Q96RY7 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC9.72□□□□□ -0.85
IFT140Q96RY7 MTF1-201ENST00000373036 7972 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
IFT140Q96RY7 C16orf62-202ENST00000417362 3115 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
IFT140Q96RY7 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC9.72□□□□□ -0.85
Retrieved 100 of 98,524 protein–RNA pairs in 107.4 ms