Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 AL022238.3-201ENST00000609279 443 ntBASIC8.71□□□□□ -1.02
TRIM47Q96LD4 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC8.71□□□□□ -1.02
TRIM47Q96LD4 pRNA.12-201ENST00000614353 90 ntBASIC8.71□□□□□ -1.02
TRIM47Q96LD4 pRNA.3-201ENST00000615048 90 ntBASIC8.71□□□□□ -1.02
TRIM47Q96LD4 AC130456.6-201ENST00000623745 765 ntBASIC8.71□□□□□ -1.02
TRIM47Q96LD4 STAG2-201ENST00000218089 5218 ntAPPRIS ALT1 TSL 1 (best) BASIC8.71□□□□□ -1.02
TRIM47Q96LD4 KAT6B-202ENST00000372711 7560 ntAPPRIS ALT2 TSL 1 (best) BASIC8.71□□□□□ -1.02
TRIM47Q96LD4 AC092646.2-201ENST00000431242 2095 ntBASIC8.71□□□□□ -1.02
TRIM47Q96LD4 ZNF713-206ENST00000633730 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC8.71□□□□□ -1.02
TRIM47Q96LD4 ATP1A4-201ENST00000368081 3839 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
TRIM47Q96LD4 CHIC1-201ENST00000373502 4158 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
TRIM47Q96LD4 CD96-202ENST00000352690 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC8.71□□□□□ -1.02
TRIM47Q96LD4 BRD8-201ENST00000230901 3198 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
TRIM47Q96LD4 TDRD3-209ENST00000621840 2497 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
TRIM47Q96LD4 ALDH1A1-201ENST00000297785 2107 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
TRIM47Q96LD4 AP002001.1-202ENST00000525797 1754 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
TRIM47Q96LD4 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC8.71□□□□□ -1.02
TRIM47Q96LD4 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
TRIM47Q96LD4 OR2T6-202ENST00000641644 4670 ntAPPRIS P1 BASIC8.71□□□□□ -1.02
TRIM47Q96LD4 MDM4-214ENST00000612738 9407 ntTSL 5 BASIC8.71□□□□□ -1.02
TRIM47Q96LD4 NASP-203ENST00000372052 1458 ntAPPRIS ALT2 TSL 5 BASIC8.7□□□□□ -1.02
TRIM47Q96LD4 KRT23-202ENST00000436344 1485 ntTSL 2 BASIC8.7□□□□□ -1.02
TRIM47Q96LD4 RERE-203ENST00000400907 2973 ntTSL 5 BASIC8.7□□□□□ -1.02
TRIM47Q96LD4 LDAH-209ENST00000440866 3728 ntTSL 2 BASIC8.7□□□□□ -1.02
TRIM47Q96LD4 HEPH-202ENST00000343002 4854 ntAPPRIS ALT2 TSL 1 (best) BASIC8.7□□□□□ -1.02
TRIM47Q96LD4 OR6J1-201ENST00000540461 4165 ntAPPRIS P1 BASIC8.7□□□□□ -1.02
TRIM47Q96LD4 ELF2P3-201ENST00000445099 1506 ntBASIC8.7□□□□□ -1.02
TRIM47Q96LD4 AC116535.1-201ENST00000499765 2335 ntTSL 2 BASIC8.7□□□□□ -1.02
TRIM47Q96LD4 DDX24-201ENST00000330836 2738 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
TRIM47Q96LD4 NUP214-202ENST00000411637 7538 ntAPPRIS ALT2 TSL 1 (best) BASIC8.7□□□□□ -1.02
TRIM47Q96LD4 CACNA1D-211ENST00000636570 6441 ntAPPRIS ALT2 TSL 5 BASIC8.7□□□□□ -1.02
TRIM47Q96LD4 FNDC3B-203ENST00000416957 3684 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
TRIM47Q96LD4 ZMYND8-211ENST00000446994 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC8.7□□□□□ -1.02
TRIM47Q96LD4 RNU4-81P-201ENST00000363561 144 ntBASIC8.7□□□□□ -1.02
TRIM47Q96LD4 SNORD115-48-201ENST00000364764 76 ntBASIC8.7□□□□□ -1.02
TRIM47Q96LD4 RNU6-40P-201ENST00000384254 107 ntBASIC8.7□□□□□ -1.02
TRIM47Q96LD4 RNU6-1009P-201ENST00000390996 107 ntBASIC8.7□□□□□ -1.02
TRIM47Q96LD4 SNORA26.8-201ENST00000391306 124 ntBASIC8.7□□□□□ -1.02
TRIM47Q96LD4 MS4A3-203ENST00000395032 867 ntTSL 2 BASIC8.7□□□□□ -1.02
TRIM47Q96LD4 OLA1P1-201ENST00000396387 1189 ntBASIC8.7□□□□□ -1.02
TRIM47Q96LD4 AL137058.2-203ENST00000398039 825 ntTSL 3 BASIC8.7□□□□□ -1.02
TRIM47Q96LD4 AC004986.1-201ENST00000414855 607 ntBASIC8.7□□□□□ -1.02
TRIM47Q96LD4 AC000041.1-201ENST00000439655 175 ntBASIC8.7□□□□□ -1.02
TRIM47Q96LD4 AC064862.5-201ENST00000440618 334 ntBASIC8.7□□□□□ -1.02
TRIM47Q96LD4 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC8.7□□□□□ -1.02
TRIM47Q96LD4 DBIL5P2-201ENST00000443827 253 ntBASIC8.7□□□□□ -1.02
TRIM47Q96LD4 AC006326.1-201ENST00000445465 787 ntBASIC8.7□□□□□ -1.02
TRIM47Q96LD4 AL020997.1-201ENST00000446554 349 ntBASIC8.7□□□□□ -1.02
TRIM47Q96LD4 IGBP1P3-201ENST00000447449 1000 ntBASIC8.7□□□□□ -1.02
TRIM47Q96LD4 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC8.7□□□□□ -1.02
TRIM47Q96LD4 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
TRIM47Q96LD4 GOT2P2-201ENST00000450663 1251 ntBASIC8.7□□□□□ -1.02
TRIM47Q96LD4 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC8.7□□□□□ -1.02
TRIM47Q96LD4 AC092691.2-201ENST00000461787 803 ntBASIC8.7□□□□□ -1.02
TRIM47Q96LD4 RN7SL233P-201ENST00000469988 277 ntBASIC8.7□□□□□ -1.02
TRIM47Q96LD4 AC010168.1-201ENST00000501178 657 ntTSL 3 BASIC8.7□□□□□ -1.02
TRIM47Q96LD4 AC010374.1-201ENST00000503762 1237 ntBASIC8.7□□□□□ -1.02
TRIM47Q96LD4 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC8.7□□□□□ -1.02
TRIM47Q96LD4 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC8.7□□□□□ -1.02
TRIM47Q96LD4 AC026782.1-201ENST00000512952 449 ntBASIC8.7□□□□□ -1.02
TRIM47Q96LD4 AC103833.1-201ENST00000517442 172 ntBASIC8.7□□□□□ -1.02
TRIM47Q96LD4 IGHVII-51-2-201ENST00000519778 259 ntBASIC8.7□□□□□ -1.02
TRIM47Q96LD4 AC083843.1-201ENST00000521444 849 ntTSL 4 BASIC8.7□□□□□ -1.02
TRIM47Q96LD4 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC8.7□□□□□ -1.02
TRIM47Q96LD4 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC8.7□□□□□ -1.02
TRIM47Q96LD4 AC004494.1-202ENST00000573820 480 ntTSL 4 BASIC8.7□□□□□ -1.02
TRIM47Q96LD4 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC8.7□□□□□ -1.02
TRIM47Q96LD4 AC019080.4-201ENST00000606200 564 ntTSL 5 BASIC8.7□□□□□ -1.02
TRIM47Q96LD4 AP003392.5-201ENST00000607857 415 ntBASIC8.7□□□□□ -1.02
TRIM47Q96LD4 AP002345.2-201ENST00000609961 904 ntBASIC8.7□□□□□ -1.02
TRIM47Q96LD4 AC055764.2-201ENST00000610089 670 ntBASIC8.7□□□□□ -1.02
TRIM47Q96LD4 uc_338.37-201ENST00000620113 186 ntBASIC8.7□□□□□ -1.02
TRIM47Q96LD4 AC011346.1-204ENST00000638089 1210 ntAPPRIS P5 TSL 3 BASIC8.7□□□□□ -1.02
TRIM47Q96LD4 BBX-207ENST00000416476 2178 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
TRIM47Q96LD4 TDRKH-201ENST00000368822 3093 ntAPPRIS P2 TSL 5 BASIC8.7□□□□□ -1.02
TRIM47Q96LD4 AC245505.2-201ENST00000553572 3055 ntBASIC8.7□□□□□ -1.02
TRIM47Q96LD4 LINC01128-205ENST00000445118 6606 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
TRIM47Q96LD4 ADA2-202ENST00000330232 3195 ntTSL 2 BASIC8.7□□□□□ -1.02
TRIM47Q96LD4 AC113615.1-201ENST00000507424 4121 ntTSL 2 BASIC8.7□□□□□ -1.02
TRIM47Q96LD4 WDR64-204ENST00000437684 2310 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
TRIM47Q96LD4 AC023818.2-201ENST00000623817 2304 ntBASIC8.7□□□□□ -1.02
TRIM47Q96LD4 HDAC9-201ENST00000401921 3254 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
TRIM47Q96LD4 FBXO3-209ENST00000531080 1448 ntTSL 2 BASIC8.7□□□□□ -1.02
TRIM47Q96LD4 AC131971.1-201ENST00000332881 1482 ntBASIC8.7□□□□□ -1.02
TRIM47Q96LD4 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
TRIM47Q96LD4 FGD4-202ENST00000427716 8242 ntAPPRIS P1 TSL 2 BASIC8.69□□□□□ -1.02
TRIM47Q96LD4 AC104083.1-201ENST00000569449 2615 ntBASIC8.69□□□□□ -1.02
TRIM47Q96LD4 LINC01829-202ENST00000433133 2100 ntTSL 2 BASIC8.69□□□□□ -1.02
TRIM47Q96LD4 C7orf31-202ENST00000409280 3357 ntAPPRIS P1 TSL 2 BASIC8.69□□□□□ -1.02
TRIM47Q96LD4 ZNF101-208ENST00000592502 4627 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
TRIM47Q96LD4 IL5RA-203ENST00000383846 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC8.69□□□□□ -1.02
TRIM47Q96LD4 POGK-201ENST00000367875 6254 ntAPPRIS P1 TSL 5 BASIC8.69□□□□□ -1.02
TRIM47Q96LD4 MT1A-201ENST00000290705 396 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
TRIM47Q96LD4 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
TRIM47Q96LD4 SNORD116-12-201ENST00000384468 92 ntBASIC8.69□□□□□ -1.02
TRIM47Q96LD4 ARSFP1-201ENST00000398758 477 ntBASIC8.69□□□□□ -1.02
TRIM47Q96LD4 FGF7P8-201ENST00000402994 292 ntBASIC8.69□□□□□ -1.02
TRIM47Q96LD4 AL136310.1-201ENST00000404926 654 ntBASIC8.69□□□□□ -1.02
TRIM47Q96LD4 U3.31-201ENST00000408113 216 ntBASIC8.69□□□□□ -1.02
TRIM47Q96LD4 METTL5-204ENST00000409340 472 ntTSL 5 BASIC8.69□□□□□ -1.02
Retrieved 100 of 98,524 protein–RNA pairs in 93.7 ms