Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 PLD1-202ENST00000351298 5604 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
CHMP4CQ96CF2 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
CHMP4CQ96CF2 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
CHMP4CQ96CF2 AC092724.1-201ENST00000624623 3397 ntBASIC7.63□□□□□ -1.19
CHMP4CQ96CF2 ERC2-214ENST00000612797 3831 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
CHMP4CQ96CF2 ELMOD2-201ENST00000323570 4409 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
CHMP4CQ96CF2 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC7.63□□□□□ -1.19
CHMP4CQ96CF2 FSHR-202ENST00000406846 2784 ntAPPRIS P4 TSL 1 (best) BASIC7.63□□□□□ -1.19
CHMP4CQ96CF2 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC7.63□□□□□ -1.19
CHMP4CQ96CF2 SCML2-202ENST00000398048 1334 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
CHMP4CQ96CF2 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC7.63□□□□□ -1.19
CHMP4CQ96CF2 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC7.63□□□□□ -1.19
CHMP4CQ96CF2 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC7.63□□□□□ -1.19
CHMP4CQ96CF2 RAB5CP1-201ENST00000395972 580 ntBASIC7.63□□□□□ -1.19
CHMP4CQ96CF2 EMX2OS-201ENST00000412075 1025 ntTSL 2 BASIC7.63□□□□□ -1.19
CHMP4CQ96CF2 MRPS21P5-201ENST00000417885 231 ntBASIC7.63□□□□□ -1.19
CHMP4CQ96CF2 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC7.63□□□□□ -1.19
CHMP4CQ96CF2 RNASE9-203ENST00000429244 1084 ntAPPRIS P3 TSL 1 (best) BASIC7.63□□□□□ -1.19
CHMP4CQ96CF2 PCNPP2-201ENST00000441651 455 ntBASIC7.63□□□□□ -1.19
CHMP4CQ96CF2 AC100823.1-201ENST00000442274 480 ntTSL 3 BASIC7.63□□□□□ -1.19
CHMP4CQ96CF2 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC7.63□□□□□ -1.19
CHMP4CQ96CF2 OR52E7P-201ENST00000452394 933 ntBASIC7.63□□□□□ -1.19
CHMP4CQ96CF2 HGF-207ENST00000453018 721 ntTSL 3 BASIC7.63□□□□□ -1.19
CHMP4CQ96CF2 RN7SL168P-201ENST00000463821 279 ntBASIC7.63□□□□□ -1.19
CHMP4CQ96CF2 RPL23AP64-201ENST00000469465 435 ntBASIC7.63□□□□□ -1.19
CHMP4CQ96CF2 RPS27P20-201ENST00000492051 246 ntBASIC7.63□□□□□ -1.19
CHMP4CQ96CF2 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC7.63□□□□□ -1.19
CHMP4CQ96CF2 C5orf64-204ENST00000507461 535 ntTSL 4 BASIC7.63□□□□□ -1.19
CHMP4CQ96CF2 AC093599.1-201ENST00000515232 562 ntTSL 4 BASIC7.63□□□□□ -1.19
CHMP4CQ96CF2 OR7E10P-201ENST00000526420 991 ntBASIC7.63□□□□□ -1.19
CHMP4CQ96CF2 AC024405.1-201ENST00000532521 1042 ntBASIC7.63□□□□□ -1.19
CHMP4CQ96CF2 AC073916.1-201ENST00000545095 130 ntBASIC7.63□□□□□ -1.19
CHMP4CQ96CF2 CAPN3-210ENST00000561817 915 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
CHMP4CQ96CF2 MT1CP-201ENST00000567054 174 ntBASIC7.63□□□□□ -1.19
CHMP4CQ96CF2 AC010547.7-201ENST00000570323 333 ntBASIC7.63□□□□□ -1.19
CHMP4CQ96CF2 SYPL1P2-201ENST00000582878 727 ntBASIC7.63□□□□□ -1.19
CHMP4CQ96CF2 AC233702.7-202ENST00000582941 211 ntBASIC7.63□□□□□ -1.19
CHMP4CQ96CF2 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC7.63□□□□□ -1.19
CHMP4CQ96CF2 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC7.63□□□□□ -1.19
CHMP4CQ96CF2 AC009032.1-201ENST00000617574 431 ntBASIC7.63□□□□□ -1.19
CHMP4CQ96CF2 PSG5-210ENST00000599812 1884 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
CHMP4CQ96CF2 NRP1-205ENST00000374823 3737 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
CHMP4CQ96CF2 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC7.63□□□□□ -1.19
CHMP4CQ96CF2 BBOX1-205ENST00000529202 1725 ntAPPRIS P1 TSL 5 BASIC7.63□□□□□ -1.19
CHMP4CQ96CF2 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
CHMP4CQ96CF2 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
CHMP4CQ96CF2 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC7.63□□□□□ -1.19
CHMP4CQ96CF2 ZNF92-201ENST00000328747 3210 ntAPPRIS P3 TSL 1 (best) BASIC7.63□□□□□ -1.19
CHMP4CQ96CF2 RARB-204ENST00000458646 2590 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
CHMP4CQ96CF2 MDGA2-201ENST00000357362 2965 ntTSL 5 BASIC7.62□□□□□ -1.19
CHMP4CQ96CF2 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC7.62□□□□□ -1.19
CHMP4CQ96CF2 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
CHMP4CQ96CF2 CFAP221-203ENST00000413369 2801 ntAPPRIS P1 TSL 5 BASIC7.62□□□□□ -1.19
CHMP4CQ96CF2 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
CHMP4CQ96CF2 MTND4P21-201ENST00000453886 1357 ntBASIC7.62□□□□□ -1.19
CHMP4CQ96CF2 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
CHMP4CQ96CF2 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC7.62□□□□□ -1.19
CHMP4CQ96CF2 TEX11-202ENST00000374320 2224 ntTSL 2 BASIC7.62□□□□□ -1.19
CHMP4CQ96CF2 EEF1A1P12-201ENST00000443590 1346 ntBASIC7.62□□□□□ -1.19
CHMP4CQ96CF2 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC7.62□□□□□ -1.19
CHMP4CQ96CF2 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC7.62□□□□□ -1.19
CHMP4CQ96CF2 MTO1-202ENST00000370305 2174 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
CHMP4CQ96CF2 TRIM69-202ENST00000338264 1222 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
CHMP4CQ96CF2 AL358178.1-201ENST00000407698 397 ntBASIC7.62□□□□□ -1.19
CHMP4CQ96CF2 CCL20-202ENST00000409189 839 ntAPPRIS ALT1 TSL 1 (best) BASIC7.62□□□□□ -1.19
CHMP4CQ96CF2 RCC2P2-201ENST00000422174 918 ntBASIC7.62□□□□□ -1.19
CHMP4CQ96CF2 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC7.62□□□□□ -1.19
CHMP4CQ96CF2 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC7.62□□□□□ -1.19
CHMP4CQ96CF2 H3F3AP5-201ENST00000475267 429 ntBASIC7.62□□□□□ -1.19
CHMP4CQ96CF2 OR9A1P-202ENST00000484361 945 ntBASIC7.62□□□□□ -1.19
CHMP4CQ96CF2 RN7SL568P-201ENST00000493069 298 ntBASIC7.62□□□□□ -1.19
CHMP4CQ96CF2 NPM1P27-201ENST00000502784 830 ntBASIC7.62□□□□□ -1.19
CHMP4CQ96CF2 WDFY3-AS1-201ENST00000510449 493 ntTSL 3 BASIC7.62□□□□□ -1.19
CHMP4CQ96CF2 AC109361.2-202ENST00000512514 483 ntTSL 3 BASIC7.62□□□□□ -1.19
CHMP4CQ96CF2 AC021269.1-201ENST00000526860 705 ntBASIC7.62□□□□□ -1.19
CHMP4CQ96CF2 AC124891.1-201ENST00000536322 519 ntBASIC7.62□□□□□ -1.19
CHMP4CQ96CF2 CTNNA3-205ENST00000545309 555 ntTSL 5 BASIC7.62□□□□□ -1.19
CHMP4CQ96CF2 AC090079.2-201ENST00000575289 768 ntBASIC7.62□□□□□ -1.19
CHMP4CQ96CF2 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC7.62□□□□□ -1.19
CHMP4CQ96CF2 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC7.62□□□□□ -1.19
CHMP4CQ96CF2 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC7.62□□□□□ -1.19
CHMP4CQ96CF2 MIR6085-201ENST00000618314 110 ntBASIC7.62□□□□□ -1.19
CHMP4CQ96CF2 DRG1-207ENST00000629688 309 ntTSL 5 BASIC7.62□□□□□ -1.19
CHMP4CQ96CF2 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC7.62□□□□□ -1.19
CHMP4CQ96CF2 CYP2C8-201ENST00000371270 1923 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
CHMP4CQ96CF2 SPATA6-202ENST00000371843 2297 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
CHMP4CQ96CF2 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
CHMP4CQ96CF2 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC7.62□□□□□ -1.19
CHMP4CQ96CF2 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC7.61□□□□□ -1.19
CHMP4CQ96CF2 CUL1-204ENST00000617797 2508 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
CHMP4CQ96CF2 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
CHMP4CQ96CF2 AC006511.3-201ENST00000624929 1783 ntBASIC7.61□□□□□ -1.19
CHMP4CQ96CF2 AC018628.1-201ENST00000624147 3819 ntBASIC7.61□□□□□ -1.19
CHMP4CQ96CF2 DYNC2LI1-201ENST00000260605 1399 ntAPPRIS P3 TSL 1 (best) BASIC7.61□□□□□ -1.19
CHMP4CQ96CF2 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
CHMP4CQ96CF2 AC007159.1-201ENST00000566529 4706 ntBASIC7.61□□□□□ -1.19
CHMP4CQ96CF2 AL929601.4-201ENST00000613011 1341 ntBASIC7.61□□□□□ -1.19
CHMP4CQ96CF2 AC044839.1-206ENST00000635559 1324 ntTSL 5 BASIC7.61□□□□□ -1.19
CHMP4CQ96CF2 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC7.61□□□□□ -1.19
CHMP4CQ96CF2 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC7.61□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 84.6 ms