Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 RN7SL165P-201ENST00000477476 291 ntBASIC7.28□□□□□ -1.24
ERCC4Q92889 AC068587.2-201ENST00000478386 781 ntBASIC7.28□□□□□ -1.24
ERCC4Q92889 AC022206.1-201ENST00000495947 347 ntBASIC7.28□□□□□ -1.24
ERCC4Q92889 AC093534.1-201ENST00000504977 132 ntBASIC7.28□□□□□ -1.24
ERCC4Q92889 AC008868.1-201ENST00000509786 737 ntBASIC7.28□□□□□ -1.24
ERCC4Q92889 AL158068.2-201ENST00000510632 563 ntTSL 4 BASIC7.28□□□□□ -1.24
ERCC4Q92889 CFI-204ENST00000510800 667 ntTSL 2 BASIC7.28□□□□□ -1.24
ERCC4Q92889 AC109361.2-202ENST00000512514 483 ntTSL 3 BASIC7.28□□□□□ -1.24
ERCC4Q92889 VTA1P2-201ENST00000520205 911 ntBASIC7.28□□□□□ -1.24
ERCC4Q92889 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC7.28□□□□□ -1.24
ERCC4Q92889 LINC00534-203ENST00000523406 812 ntTSL 3 BASIC7.28□□□□□ -1.24
ERCC4Q92889 CIR1P1-201ENST00000524055 1133 ntBASIC7.28□□□□□ -1.24
ERCC4Q92889 OR7E10P-201ENST00000526420 991 ntBASIC7.28□□□□□ -1.24
ERCC4Q92889 OR4A42P-201ENST00000531397 938 ntBASIC7.28□□□□□ -1.24
ERCC4Q92889 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC7.28□□□□□ -1.24
ERCC4Q92889 ACER3-213ENST00000533873 929 ntTSL 2 BASIC7.28□□□□□ -1.24
ERCC4Q92889 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC7.28□□□□□ -1.24
ERCC4Q92889 CTNNA3-205ENST00000545309 555 ntTSL 5 BASIC7.28□□□□□ -1.24
ERCC4Q92889 LINC02413-201ENST00000549914 723 ntTSL 5 BASIC7.28□□□□□ -1.24
ERCC4Q92889 AL162632.2-201ENST00000553933 399 ntBASIC7.28□□□□□ -1.24
ERCC4Q92889 AL049870.3-201ENST00000555157 360 ntTSL 2 BASIC7.28□□□□□ -1.24
ERCC4Q92889 AC093510.2-201ENST00000562820 896 ntBASIC7.28□□□□□ -1.24
ERCC4Q92889 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC7.28□□□□□ -1.24
ERCC4Q92889 ZNF790-AS1-201ENST00000587278 653 ntTSL 5 BASIC7.28□□□□□ -1.24
ERCC4Q92889 AC091133.5-201ENST00000603088 301 ntBASIC7.28□□□□□ -1.24
ERCC4Q92889 AC009948.4-201ENST00000604692 675 ntBASIC7.28□□□□□ -1.24
ERCC4Q92889 KATNBL1P5-201ENST00000605015 517 ntBASIC7.28□□□□□ -1.24
ERCC4Q92889 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC7.28□□□□□ -1.24
ERCC4Q92889 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC7.28□□□□□ -1.24
ERCC4Q92889 AL590410.1-201ENST00000617925 333 ntBASIC7.28□□□□□ -1.24
ERCC4Q92889 AC097460.3-201ENST00000623099 442 ntBASIC7.28□□□□□ -1.24
ERCC4Q92889 OR51B2-201ENST00000624187 939 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
ERCC4Q92889 AL035425.4-201ENST00000624509 1063 ntBASIC7.28□□□□□ -1.24
ERCC4Q92889 AC136428.4-201ENST00000634254 1155 ntBASIC7.28□□□□□ -1.24
ERCC4Q92889 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC7.28□□□□□ -1.24
ERCC4Q92889 ZNF214-204ENST00000536068 2562 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
ERCC4Q92889 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC7.28□□□□□ -1.24
ERCC4Q92889 AC079753.1-201ENST00000623243 3868 ntBASIC7.28□□□□□ -1.24
ERCC4Q92889 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC7.28□□□□□ -1.24
ERCC4Q92889 MEIOC-202ENST00000409464 4067 ntAPPRIS ALT2 TSL 2 BASIC7.28□□□□□ -1.24
ERCC4Q92889 PSMC6-219ENST00000612399 1590 ntAPPRIS P2 TSL 1 (best) BASIC7.28□□□□□ -1.24
ERCC4Q92889 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
ERCC4Q92889 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC7.28□□□□□ -1.24
ERCC4Q92889 ESRRG-212ENST00000463665 3359 ntTSL 2 BASIC7.28□□□□□ -1.24
ERCC4Q92889 AMY2A-204ENST00000622339 1862 ntAPPRIS P1 TSL 5 BASIC7.28□□□□□ -1.24
ERCC4Q92889 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC7.28□□□□□ -1.24
ERCC4Q92889 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC7.28□□□□□ -1.24
ERCC4Q92889 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC7.27□□□□□ -1.24
ERCC4Q92889 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC7.27□□□□□ -1.24
ERCC4Q92889 AC007878.1-201ENST00000434786 1615 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
ERCC4Q92889 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
ERCC4Q92889 AC005725.1-201ENST00000577346 2607 ntBASIC7.27□□□□□ -1.25
ERCC4Q92889 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
ERCC4Q92889 BPESC1-201ENST00000418282 3522 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
ERCC4Q92889 RNU6-618P-201ENST00000363518 112 ntBASIC7.27□□□□□ -1.25
ERCC4Q92889 NQO1-202ENST00000379046 1105 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
ERCC4Q92889 U3.52-201ENST00000384034 216 ntBASIC7.27□□□□□ -1.25
ERCC4Q92889 RNU6-1257P-201ENST00000384625 110 ntBASIC7.27□□□□□ -1.25
ERCC4Q92889 RNU11-6P-201ENST00000391127 133 ntBASIC7.27□□□□□ -1.25
ERCC4Q92889 U3.43-201ENST00000410734 213 ntBASIC7.27□□□□□ -1.25
ERCC4Q92889 AC019130.1-201ENST00000413841 391 ntTSL 2 BASIC7.27□□□□□ -1.25
ERCC4Q92889 AL359962.1-201ENST00000417969 303 ntTSL 5 BASIC7.27□□□□□ -1.25
ERCC4Q92889 USP12PY-201ENST00000427677 1064 ntBASIC7.27□□□□□ -1.25
ERCC4Q92889 HTR3E-AS1-201ENST00000431427 515 ntTSL 4 BASIC7.27□□□□□ -1.25
ERCC4Q92889 AP006216.1-201ENST00000439104 419 ntTSL 3 BASIC7.27□□□□□ -1.25
ERCC4Q92889 AL451164.3-201ENST00000441377 447 ntTSL 5 BASIC7.27□□□□□ -1.25
ERCC4Q92889 SNRPBP1-201ENST00000443634 282 ntBASIC7.27□□□□□ -1.25
ERCC4Q92889 TVP23CP1-201ENST00000450317 639 ntBASIC7.27□□□□□ -1.25
ERCC4Q92889 SLAMF6P1-201ENST00000451067 602 ntBASIC7.27□□□□□ -1.25
ERCC4Q92889 AC006026.3-201ENST00000454029 143 ntTSL 3 BASIC7.27□□□□□ -1.25
ERCC4Q92889 AL354872.1-201ENST00000456361 967 ntBASIC7.27□□□□□ -1.25
ERCC4Q92889 AC128689.1-201ENST00000466206 562 ntTSL 4 BASIC7.27□□□□□ -1.25
ERCC4Q92889 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
ERCC4Q92889 AC109588.1-201ENST00000507759 726 ntTSL 3 BASIC7.27□□□□□ -1.25
ERCC4Q92889 AC114940.1-201ENST00000512162 1265 ntBASIC7.27□□□□□ -1.25
ERCC4Q92889 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC7.27□□□□□ -1.25
ERCC4Q92889 AC093878.1-201ENST00000515630 432 ntBASIC7.27□□□□□ -1.25
ERCC4Q92889 Y_RNA.717-201ENST00000517106 92 ntBASIC7.27□□□□□ -1.25
ERCC4Q92889 MTND2P32-201ENST00000521584 1038 ntBASIC7.27□□□□□ -1.25
ERCC4Q92889 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC7.27□□□□□ -1.25
ERCC4Q92889 KC877392.1-201ENST00000524855 426 ntTSL 3 BASIC7.27□□□□□ -1.25
ERCC4Q92889 AC100768.2-201ENST00000534068 683 ntTSL 3 BASIC7.27□□□□□ -1.25
ERCC4Q92889 OR4A6P-201ENST00000534364 970 ntBASIC7.27□□□□□ -1.25
ERCC4Q92889 GPRC5D-AS1-203ENST00000536029 466 ntTSL 3 BASIC7.27□□□□□ -1.25
ERCC4Q92889 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC7.27□□□□□ -1.25
ERCC4Q92889 AC006305.3-201ENST00000590589 454 ntTSL 2 BASIC7.27□□□□□ -1.25
ERCC4Q92889 AC006116.9-203ENST00000591036 566 ntTSL 4 BASIC7.27□□□□□ -1.25
ERCC4Q92889 AC091057.3-201ENST00000602684 733 ntBASIC7.27□□□□□ -1.25
ERCC4Q92889 MTATP6P2-201ENST00000603319 678 ntBASIC7.27□□□□□ -1.25
ERCC4Q92889 AL662797.2-201ENST00000607333 527 ntTSL 2 BASIC7.27□□□□□ -1.25
ERCC4Q92889 AL355802.4-201ENST00000607635 548 ntBASIC7.27□□□□□ -1.25
ERCC4Q92889 AL352984.2-202ENST00000613699 155 ntBASIC7.27□□□□□ -1.25
ERCC4Q92889 MIR6774-201ENST00000614651 70 ntBASIC7.27□□□□□ -1.25
ERCC4Q92889 AL445649.1-201ENST00000615941 691 ntBASIC7.27□□□□□ -1.25
ERCC4Q92889 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC7.27□□□□□ -1.25
ERCC4Q92889 HSPD1P8-201ENST00000400121 1658 ntBASIC7.27□□□□□ -1.25
ERCC4Q92889 AC083837.1-201ENST00000565297 2994 ntBASIC7.27□□□□□ -1.25
ERCC4Q92889 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC7.27□□□□□ -1.25
ERCC4Q92889 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
ERCC4Q92889 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC7.27□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 98.4 ms