Protein–RNA interactions for Protein: Q8NEF3

CCDC112, Coiled-coil domain-containing protein 112, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC112Q8NEF3 AC006065.4-204ENST00000537478 654 ntTSL 2 BASIC6.71□□□□□ -1.34
CCDC112Q8NEF3 AC025419.1-204ENST00000539653 745 ntTSL 3 BASIC6.71□□□□□ -1.34
CCDC112Q8NEF3 AC006065.4-203ENST00000541065 526 ntTSL 2 BASIC6.71□□□□□ -1.34
CCDC112Q8NEF3 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
CCDC112Q8NEF3 AL136084.2-222ENST00000589105 885 ntTSL 5 BASIC6.71□□□□□ -1.34
CCDC112Q8NEF3 AC012594.1-252ENST00000595011 876 ntTSL 5 BASIC6.71□□□□□ -1.34
CCDC112Q8NEF3 PCA3_2.1-201ENST00000612507 409 ntBASIC6.71□□□□□ -1.34
CCDC112Q8NEF3 TEX41-293ENST00000630451 690 ntTSL 5 BASIC6.71□□□□□ -1.34
CCDC112Q8NEF3 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC6.71□□□□□ -1.34
CCDC112Q8NEF3 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
CCDC112Q8NEF3 AC007878.1-201ENST00000434786 1615 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
CCDC112Q8NEF3 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC6.71□□□□□ -1.34
CCDC112Q8NEF3 AC005224.3-201ENST00000584683 2140 ntBASIC6.71□□□□□ -1.34
CCDC112Q8NEF3 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC6.71□□□□□ -1.34
CCDC112Q8NEF3 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
CCDC112Q8NEF3 ZNF480-201ENST00000334564 1843 ntAPPRIS ALT2 TSL 2 BASIC6.71□□□□□ -1.34
CCDC112Q8NEF3 AC004158.1-201ENST00000564508 4319 ntBASIC6.71□□□□□ -1.34
CCDC112Q8NEF3 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
CCDC112Q8NEF3 AP000473.2-201ENST00000602659 1537 ntBASIC6.71□□□□□ -1.34
CCDC112Q8NEF3 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
CCDC112Q8NEF3 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
CCDC112Q8NEF3 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC6.7□□□□□ -1.34
CCDC112Q8NEF3 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC6.7□□□□□ -1.34
CCDC112Q8NEF3 MATR3-215ENST00000510056 3040 ntTSL 5 BASIC6.7□□□□□ -1.34
CCDC112Q8NEF3 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC6.7□□□□□ -1.34
CCDC112Q8NEF3 AC005702.3-201ENST00000585345 1447 ntBASIC6.7□□□□□ -1.34
CCDC112Q8NEF3 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
CCDC112Q8NEF3 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
CCDC112Q8NEF3 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
CCDC112Q8NEF3 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
CCDC112Q8NEF3 ZNF66-202ENST00000360204 1120 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
CCDC112Q8NEF3 RNA5SP140-201ENST00000364524 92 ntBASIC6.7□□□□□ -1.34
CCDC112Q8NEF3 AC019178.1-201ENST00000392337 440 ntBASIC6.7□□□□□ -1.34
CCDC112Q8NEF3 VIM2P-201ENST00000402383 1294 ntBASIC6.7□□□□□ -1.34
CCDC112Q8NEF3 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC6.7□□□□□ -1.34
CCDC112Q8NEF3 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC6.7□□□□□ -1.34
CCDC112Q8NEF3 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC6.7□□□□□ -1.34
CCDC112Q8NEF3 AL031681.1-201ENST00000443304 400 ntBASIC6.7□□□□□ -1.34
CCDC112Q8NEF3 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC6.7□□□□□ -1.34
CCDC112Q8NEF3 AL020997.1-201ENST00000446554 349 ntBASIC6.7□□□□□ -1.34
CCDC112Q8NEF3 RPL23AP60-201ENST00000450011 454 ntBASIC6.7□□□□□ -1.34
CCDC112Q8NEF3 RN7SL552P-201ENST00000462094 276 ntBASIC6.7□□□□□ -1.34
CCDC112Q8NEF3 AC078785.1-205ENST00000491578 482 ntTSL 4 BASIC6.7□□□□□ -1.34
CCDC112Q8NEF3 AC116345.3-201ENST00000508255 449 ntTSL 3 BASIC6.7□□□□□ -1.34
CCDC112Q8NEF3 RN7SKP196-201ENST00000516267 345 ntBASIC6.7□□□□□ -1.34
CCDC112Q8NEF3 IGHV4-55-201ENST00000520889 368 ntBASIC6.7□□□□□ -1.34
CCDC112Q8NEF3 TPM3P3-201ENST00000521343 354 ntBASIC6.7□□□□□ -1.34
CCDC112Q8NEF3 AC103843.1-201ENST00000527318 682 ntTSL 4 BASIC6.7□□□□□ -1.34
CCDC112Q8NEF3 AC084851.2-201ENST00000530377 364 ntBASIC6.7□□□□□ -1.34
CCDC112Q8NEF3 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC6.7□□□□□ -1.34
CCDC112Q8NEF3 HNRNPA1P74-201ENST00000560782 835 ntBASIC6.7□□□□□ -1.34
CCDC112Q8NEF3 WBP1LP11-201ENST00000586141 328 ntBASIC6.7□□□□□ -1.34
CCDC112Q8NEF3 AC060780.2-201ENST00000589047 198 ntBASIC6.7□□□□□ -1.34
CCDC112Q8NEF3 RPS4XP21-201ENST00000603814 750 ntBASIC6.7□□□□□ -1.34
CCDC112Q8NEF3 AC114477.1-201ENST00000605097 605 ntBASIC6.7□□□□□ -1.34
CCDC112Q8NEF3 AL390877.1-201ENST00000605704 214 ntBASIC6.7□□□□□ -1.34
CCDC112Q8NEF3 AC009779.8-202ENST00000607990 932 ntBASIC6.7□□□□□ -1.34
CCDC112Q8NEF3 AL513478.2-201ENST00000610400 988 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
CCDC112Q8NEF3 Metazoa_SRP.81-201ENST00000618466 316 ntBASIC6.7□□□□□ -1.34
CCDC112Q8NEF3 AL137067.2-201ENST00000621202 131 ntBASIC6.7□□□□□ -1.34
CCDC112Q8NEF3 AC009120.7-201ENST00000623452 780 ntBASIC6.7□□□□□ -1.34
CCDC112Q8NEF3 OR7A1P-202ENST00000641542 1158 ntBASIC6.7□□□□□ -1.34
CCDC112Q8NEF3 AC079776.5-201ENST00000641920 211 ntBASIC6.7□□□□□ -1.34
CCDC112Q8NEF3 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
CCDC112Q8NEF3 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC6.7□□□□□ -1.34
CCDC112Q8NEF3 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
CCDC112Q8NEF3 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC6.7□□□□□ -1.34
CCDC112Q8NEF3 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
CCDC112Q8NEF3 VN2R1P-201ENST00000449668 1743 ntBASIC6.7□□□□□ -1.34
CCDC112Q8NEF3 AC016583.1-201ENST00000624221 2431 ntBASIC6.69□□□□□ -1.34
CCDC112Q8NEF3 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC6.69□□□□□ -1.34
CCDC112Q8NEF3 AL158152.1-201ENST00000602652 1435 ntBASIC6.69□□□□□ -1.34
CCDC112Q8NEF3 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
CCDC112Q8NEF3 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
CCDC112Q8NEF3 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC6.69□□□□□ -1.34
CCDC112Q8NEF3 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
CCDC112Q8NEF3 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC6.69□□□□□ -1.34
CCDC112Q8NEF3 FIGN-202ENST00000409634 746 ntTSL 5 BASIC6.69□□□□□ -1.34
CCDC112Q8NEF3 PTCD2P2-201ENST00000415579 1095 ntBASIC6.69□□□□□ -1.34
CCDC112Q8NEF3 AC006509.1-201ENST00000420788 634 ntBASIC6.69□□□□□ -1.34
CCDC112Q8NEF3 AC099670.2-201ENST00000435130 321 ntBASIC6.69□□□□□ -1.34
CCDC112Q8NEF3 LINC01449-201ENST00000440213 1220 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
CCDC112Q8NEF3 AC106874.1-201ENST00000440495 646 ntTSL 3 BASIC6.69□□□□□ -1.34
CCDC112Q8NEF3 AL136460.1-201ENST00000442389 473 ntTSL 3 BASIC6.69□□□□□ -1.34
CCDC112Q8NEF3 AL121578.2-201ENST00000448797 447 ntBASIC6.69□□□□□ -1.34
CCDC112Q8NEF3 DIRC3-AS1-201ENST00000452813 557 ntTSL 3 BASIC6.69□□□□□ -1.34
CCDC112Q8NEF3 AC104233.1-201ENST00000458107 339 ntTSL 5 BASIC6.69□□□□□ -1.34
CCDC112Q8NEF3 SH2D1A-203ENST00000477673 461 ntTSL 2 BASIC6.69□□□□□ -1.34
CCDC112Q8NEF3 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC6.69□□□□□ -1.34
CCDC112Q8NEF3 AC124945.1-201ENST00000485133 188 ntBASIC6.69□□□□□ -1.34
CCDC112Q8NEF3 PFN2-213ENST00000494827 793 ntTSL 4 BASIC6.69□□□□□ -1.34
CCDC112Q8NEF3 AC090958.1-201ENST00000511122 351 ntBASIC6.69□□□□□ -1.34
CCDC112Q8NEF3 AC010634.1-201ENST00000513925 540 ntTSL 3 BASIC6.69□□□□□ -1.34
CCDC112Q8NEF3 AC137549.1-201ENST00000514243 533 ntBASIC6.69□□□□□ -1.34
CCDC112Q8NEF3 CRYAB-205ENST00000526180 1017 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
CCDC112Q8NEF3 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC6.69□□□□□ -1.34
CCDC112Q8NEF3 AC023905.1-201ENST00000559799 1178 ntTSL 2 BASIC6.69□□□□□ -1.34
CCDC112Q8NEF3 AC026462.3-201ENST00000565153 557 ntTSL 2 BASIC6.69□□□□□ -1.34
CCDC112Q8NEF3 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC6.69□□□□□ -1.34
CCDC112Q8NEF3 AC091132.1-201ENST00000588189 547 ntTSL 5 BASIC6.69□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 96.8 ms