Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 ANKRD46-201ENST00000335659 2649 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
TRIM48Q8IWZ4 AL929601.4-201ENST00000613011 1341 ntBASIC6.74□□□□□ -1.33
TRIM48Q8IWZ4 CHRM5-201ENST00000383263 5410 ntAPPRIS P1 TSL 2 BASIC6.74□□□□□ -1.33
TRIM48Q8IWZ4 HABP2-201ENST00000351270 3009 ntAPPRIS P3 TSL 1 (best) BASIC6.74□□□□□ -1.33
TRIM48Q8IWZ4 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC6.74□□□□□ -1.33
TRIM48Q8IWZ4 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
TRIM48Q8IWZ4 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC6.73□□□□□ -1.33
TRIM48Q8IWZ4 GJB6-205ENST00000636852 1840 ntAPPRIS P1 TSL 4 BASIC6.73□□□□□ -1.33
TRIM48Q8IWZ4 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
TRIM48Q8IWZ4 LINC02249-202ENST00000562624 4260 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
TRIM48Q8IWZ4 TMEM217-202ENST00000356757 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
TRIM48Q8IWZ4 GALNT5-201ENST00000259056 6171 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
TRIM48Q8IWZ4 ATP10D-201ENST00000273859 6655 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
TRIM48Q8IWZ4 HSDL2-201ENST00000398803 2983 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
TRIM48Q8IWZ4 LINC00702-203ENST00000608792 6300 ntTSL 4 BASIC6.73□□□□□ -1.33
TRIM48Q8IWZ4 KLHL5-201ENST00000261425 3425 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
TRIM48Q8IWZ4 TMEM230-204ENST00000379277 1536 ntAPPRIS P1 TSL 3 BASIC6.73□□□□□ -1.33
TRIM48Q8IWZ4 METTL5-202ENST00000308099 629 ntTSL 3 BASIC6.73□□□□□ -1.33
TRIM48Q8IWZ4 SSX3-202ENST00000376893 800 ntTSL 2 BASIC6.73□□□□□ -1.33
TRIM48Q8IWZ4 TPT1-204ENST00000379060 764 ntTSL 5 BASIC6.73□□□□□ -1.33
TRIM48Q8IWZ4 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
TRIM48Q8IWZ4 IGHV2-26-201ENST00000390611 381 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
TRIM48Q8IWZ4 RNU6-1242P-201ENST00000391052 103 ntBASIC6.73□□□□□ -1.33
TRIM48Q8IWZ4 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC6.73□□□□□ -1.33
TRIM48Q8IWZ4 AC098592.2-201ENST00000413158 265 ntBASIC6.73□□□□□ -1.33
TRIM48Q8IWZ4 RAB9AP4-201ENST00000415230 609 ntBASIC6.73□□□□□ -1.33
TRIM48Q8IWZ4 OR1M1-201ENST00000429566 1035 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
TRIM48Q8IWZ4 BX119904.1-201ENST00000432026 348 ntBASIC6.73□□□□□ -1.33
TRIM48Q8IWZ4 TRAPPC13P1-201ENST00000435991 1062 ntBASIC6.73□□□□□ -1.33
TRIM48Q8IWZ4 ZNF138-205ENST00000440155 1066 ntAPPRIS P3 TSL 2 BASIC6.73□□□□□ -1.33
TRIM48Q8IWZ4 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC6.73□□□□□ -1.33
TRIM48Q8IWZ4 ATP5C1P1-201ENST00000441945 895 ntBASIC6.73□□□□□ -1.33
TRIM48Q8IWZ4 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC6.73□□□□□ -1.33
TRIM48Q8IWZ4 MTND1P29-201ENST00000448112 647 ntBASIC6.73□□□□□ -1.33
TRIM48Q8IWZ4 GOT2P2-201ENST00000450663 1251 ntBASIC6.73□□□□□ -1.33
TRIM48Q8IWZ4 ZNF886P-201ENST00000450781 723 ntBASIC6.73□□□□□ -1.33
TRIM48Q8IWZ4 PTGES3P5-201ENST00000455109 434 ntBASIC6.73□□□□□ -1.33
TRIM48Q8IWZ4 ZNF286A-205ENST00000472486 827 ntTSL 2 BASIC6.73□□□□□ -1.33
TRIM48Q8IWZ4 STRADBP1-201ENST00000478954 1281 ntBASIC6.73□□□□□ -1.33
TRIM48Q8IWZ4 RN7SL654P-201ENST00000479178 292 ntBASIC6.73□□□□□ -1.33
TRIM48Q8IWZ4 RN7SL655P-201ENST00000486087 298 ntBASIC6.73□□□□□ -1.33
TRIM48Q8IWZ4 AC074386.1-206ENST00000487102 761 ntBASIC6.73□□□□□ -1.33
TRIM48Q8IWZ4 TPT1P3-201ENST00000492841 512 ntBASIC6.73□□□□□ -1.33
TRIM48Q8IWZ4 AC118282.2-201ENST00000508739 374 ntBASIC6.73□□□□□ -1.33
TRIM48Q8IWZ4 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC6.73□□□□□ -1.33
TRIM48Q8IWZ4 RNA5SP278-201ENST00000517055 102 ntBASIC6.73□□□□□ -1.33
TRIM48Q8IWZ4 IGLVVII-41-1-201ENST00000518405 151 ntBASIC6.73□□□□□ -1.33
TRIM48Q8IWZ4 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC6.73□□□□□ -1.33
TRIM48Q8IWZ4 AC087373.1-201ENST00000524920 491 ntBASIC6.73□□□□□ -1.33
TRIM48Q8IWZ4 RERG-AS1-201ENST00000541243 337 ntTSL 2 BASIC6.73□□□□□ -1.33
TRIM48Q8IWZ4 AL512310.9-201ENST00000553311 948 ntBASIC6.73□□□□□ -1.33
TRIM48Q8IWZ4 AC104229.1-201ENST00000561364 255 ntBASIC6.73□□□□□ -1.33
TRIM48Q8IWZ4 AC025283.1-201ENST00000572039 734 ntBASIC6.73□□□□□ -1.33
TRIM48Q8IWZ4 TTC39C-204ENST00000577185 533 ntTSL 3 BASIC6.73□□□□□ -1.33
TRIM48Q8IWZ4 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
TRIM48Q8IWZ4 C5orf63-208ENST00000607731 478 ntTSL 5 BASIC6.73□□□□□ -1.33
TRIM48Q8IWZ4 ARF4-AS1-203ENST00000607782 552 ntTSL 3 BASIC6.73□□□□□ -1.33
TRIM48Q8IWZ4 AL139407.1-201ENST00000613826 1175 ntBASIC6.73□□□□□ -1.33
TRIM48Q8IWZ4 AC009318.3-201ENST00000616916 503 ntBASIC6.73□□□□□ -1.33
TRIM48Q8IWZ4 AC013470.4-201ENST00000619978 986 ntBASIC6.73□□□□□ -1.33
TRIM48Q8IWZ4 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC6.73□□□□□ -1.33
TRIM48Q8IWZ4 RMDN2-AS1-207ENST00000627614 765 ntTSL 5 BASIC6.73□□□□□ -1.33
TRIM48Q8IWZ4 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC6.73□□□□□ -1.33
TRIM48Q8IWZ4 OR10AB1P-202ENST00000641219 1686 ntBASIC6.73□□□□□ -1.33
TRIM48Q8IWZ4 MAPK10-323ENST00000641493 3207 ntBASIC6.73□□□□□ -1.33
TRIM48Q8IWZ4 AC073342.2-201ENST00000595842 1800 ntBASIC6.73□□□□□ -1.33
TRIM48Q8IWZ4 AC095038.1-201ENST00000429248 1591 ntBASIC6.73□□□□□ -1.33
TRIM48Q8IWZ4 CFAP61-201ENST00000245957 4082 ntAPPRIS P2 TSL 1 (best) BASIC6.73□□□□□ -1.33
TRIM48Q8IWZ4 KNG1-201ENST00000265023 3435 ntAPPRIS ALT1 TSL 2 BASIC6.73□□□□□ -1.33
TRIM48Q8IWZ4 GRIP1-202ENST00000398016 4888 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
TRIM48Q8IWZ4 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
TRIM48Q8IWZ4 RASSF8-216ENST00000615708 1328 ntTSL 5 BASIC6.73□□□□□ -1.33
TRIM48Q8IWZ4 AC008432.1-201ENST00000615912 1320 ntBASIC6.73□□□□□ -1.33
TRIM48Q8IWZ4 OR2T2-203ENST00000642130 3331 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
TRIM48Q8IWZ4 ZNF532-222ENST00000591083 5324 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
TRIM48Q8IWZ4 ANKRD44-201ENST00000282272 5147 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
TRIM48Q8IWZ4 AC005821.1-203ENST00000577270 3145 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
TRIM48Q8IWZ4 LIMA1-202ENST00000394943 3669 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
TRIM48Q8IWZ4 AL033543.1-201ENST00000623440 13454 ntBASIC6.72□□□□□ -1.33
TRIM48Q8IWZ4 CD163-202ENST00000396620 3800 ntAPPRIS ALT2 TSL 2 BASIC6.72□□□□□ -1.33
TRIM48Q8IWZ4 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
TRIM48Q8IWZ4 AC019270.1-201ENST00000523495 3488 ntTSL 5 BASIC6.72□□□□□ -1.33
TRIM48Q8IWZ4 ARHGAP21-201ENST00000320481 4343 ntTSL 5 BASIC6.72□□□□□ -1.33
TRIM48Q8IWZ4 BEST3-202ENST00000330891 3532 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
TRIM48Q8IWZ4 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
TRIM48Q8IWZ4 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC6.72□□□□□ -1.33
TRIM48Q8IWZ4 ATP5EP2-201ENST00000381026 385 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
TRIM48Q8IWZ4 RNU6-1005P-201ENST00000384519 107 ntBASIC6.72□□□□□ -1.33
TRIM48Q8IWZ4 FABP6-202ENST00000402432 572 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
TRIM48Q8IWZ4 RN7SKP232-201ENST00000410170 290 ntBASIC6.72□□□□□ -1.33
TRIM48Q8IWZ4 RN7SKP182-201ENST00000410772 298 ntBASIC6.72□□□□□ -1.33
TRIM48Q8IWZ4 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC6.72□□□□□ -1.33
TRIM48Q8IWZ4 USP9YP21-201ENST00000420603 432 ntBASIC6.72□□□□□ -1.33
TRIM48Q8IWZ4 AC090960.1-201ENST00000421072 306 ntBASIC6.72□□□□□ -1.33
TRIM48Q8IWZ4 CYP4F32P-201ENST00000426492 504 ntBASIC6.72□□□□□ -1.33
TRIM48Q8IWZ4 AC096638.2-201ENST00000434965 711 ntBASIC6.72□□□□□ -1.33
TRIM48Q8IWZ4 AC234771.4-201ENST00000441416 730 ntBASIC6.72□□□□□ -1.33
TRIM48Q8IWZ4 NPM1P9-201ENST00000453156 844 ntBASIC6.72□□□□□ -1.33
TRIM48Q8IWZ4 RPSAP24-201ENST00000461543 873 ntBASIC6.72□□□□□ -1.33
TRIM48Q8IWZ4 AC063955.1-201ENST00000462872 685 ntBASIC6.72□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 94.9 ms