Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
CCDC71Q8IV32 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CCDC71Q8IV32 OR7D4-203ENST00000641669 4965 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
CCDC71Q8IV32 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CCDC71Q8IV32 AC022164.1-201ENST00000568767 2673 ntBASIC5.82□□□□□ -1.48
CCDC71Q8IV32 AC083837.1-201ENST00000565297 2994 ntBASIC5.82□□□□□ -1.48
CCDC71Q8IV32 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
CCDC71Q8IV32 AL359976.1-201ENST00000418655 3528 ntBASIC5.82□□□□□ -1.48
CCDC71Q8IV32 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC5.82□□□□□ -1.48
CCDC71Q8IV32 SLCO1C1-207ENST00000540354 2529 ntTSL 2 BASIC5.82□□□□□ -1.48
CCDC71Q8IV32 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.82□□□□□ -1.48
CCDC71Q8IV32 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
CCDC71Q8IV32 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CCDC71Q8IV32 FASLG-201ENST00000340030 917 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CCDC71Q8IV32 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
CCDC71Q8IV32 CYTOR-204ENST00000409898 560 ntTSL 5 BASIC5.82□□□□□ -1.48
CCDC71Q8IV32 MTND2P12-201ENST00000417560 1252 ntBASIC5.82□□□□□ -1.48
CCDC71Q8IV32 AL035401.1-201ENST00000420572 871 ntTSL 3 BASIC5.82□□□□□ -1.48
CCDC71Q8IV32 OSTCP4-201ENST00000424397 449 ntBASIC5.82□□□□□ -1.48
CCDC71Q8IV32 AL606534.4-201ENST00000427176 792 ntTSL 5 BASIC5.82□□□□□ -1.48
CCDC71Q8IV32 AC003989.1-201ENST00000434569 565 ntBASIC5.82□□□□□ -1.48
CCDC71Q8IV32 DNAJC19P5-201ENST00000443295 316 ntBASIC5.82□□□□□ -1.48
CCDC71Q8IV32 AC022498.1-201ENST00000449845 696 ntTSL 3 BASIC5.82□□□□□ -1.48
CCDC71Q8IV32 MIR4435-2HG-214ENST00000453478 560 ntTSL 4 BASIC5.82□□□□□ -1.48
CCDC71Q8IV32 Z83838.1-202ENST00000456225 839 ntBASIC5.82□□□□□ -1.48
CCDC71Q8IV32 snoU13.29-201ENST00000459370 104 ntBASIC5.82□□□□□ -1.48
CCDC71Q8IV32 AC078785.1-205ENST00000491578 482 ntTSL 4 BASIC5.82□□□□□ -1.48
CCDC71Q8IV32 AC023794.2-201ENST00000504891 528 ntTSL 3 BASIC5.82□□□□□ -1.48
CCDC71Q8IV32 SNX24-205ENST00000506996 588 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CCDC71Q8IV32 LINC02506-201ENST00000513211 734 ntTSL 3 BASIC5.82□□□□□ -1.48
CCDC71Q8IV32 AC022915.3-201ENST00000518620 594 ntTSL 4 BASIC5.82□□□□□ -1.48
CCDC71Q8IV32 AC008429.4-201ENST00000521201 182 ntBASIC5.82□□□□□ -1.48
CCDC71Q8IV32 CYCSP25-201ENST00000525280 316 ntBASIC5.82□□□□□ -1.48
CCDC71Q8IV32 RSF1-IT2-201ENST00000529656 566 ntTSL 5 BASIC5.82□□□□□ -1.48
CCDC71Q8IV32 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CCDC71Q8IV32 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC5.82□□□□□ -1.48
CCDC71Q8IV32 AC078864.1-201ENST00000547538 512 ntTSL 4 BASIC5.82□□□□□ -1.48
CCDC71Q8IV32 AC104984.1-201ENST00000581633 697 ntTSL 3 BASIC5.82□□□□□ -1.48
CCDC71Q8IV32 MIR4420-201ENST00000583944 77 ntBASIC5.82□□□□□ -1.48
CCDC71Q8IV32 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC5.82□□□□□ -1.48
CCDC71Q8IV32 GLYATL1P2-202ENST00000588046 902 ntBASIC5.82□□□□□ -1.48
CCDC71Q8IV32 ZNF675-208ENST00000601010 669 ntTSL 5 BASIC5.82□□□□□ -1.48
CCDC71Q8IV32 AC125494.2-201ENST00000602431 657 ntBASIC5.82□□□□□ -1.48
CCDC71Q8IV32 AL139041.1-201ENST00000605480 610 ntBASIC5.82□□□□□ -1.48
CCDC71Q8IV32 AC018690.1-201ENST00000608144 626 ntBASIC5.82□□□□□ -1.48
CCDC71Q8IV32 AC022400.9-201ENST00000623633 273 ntBASIC5.82□□□□□ -1.48
CCDC71Q8IV32 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC5.82□□□□□ -1.48
CCDC71Q8IV32 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC5.82□□□□□ -1.48
CCDC71Q8IV32 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
CCDC71Q8IV32 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
CCDC71Q8IV32 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CCDC71Q8IV32 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CCDC71Q8IV32 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
CCDC71Q8IV32 GUCY1B2-204ENST00000531898 1979 ntBASIC5.82□□□□□ -1.48
CCDC71Q8IV32 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CCDC71Q8IV32 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC5.82□□□□□ -1.48
CCDC71Q8IV32 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CCDC71Q8IV32 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CCDC71Q8IV32 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC5.81□□□□□ -1.48
CCDC71Q8IV32 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CCDC71Q8IV32 C14orf105-201ENST00000216445 3082 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
CCDC71Q8IV32 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CCDC71Q8IV32 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
CCDC71Q8IV32 NAT2-201ENST00000286479 1322 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CCDC71Q8IV32 PLN-201ENST00000357525 2001 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CCDC71Q8IV32 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CCDC71Q8IV32 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CCDC71Q8IV32 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CCDC71Q8IV32 GIF-201ENST00000257248 1518 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CCDC71Q8IV32 QRSL1P1-201ENST00000400977 1540 ntBASIC5.81□□□□□ -1.48
CCDC71Q8IV32 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.81□□□□□ -1.48
CCDC71Q8IV32 ZSCAN4-202ENST00000612521 1979 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
CCDC71Q8IV32 AP002512.4-202ENST00000641599 4530 ntBASIC5.81□□□□□ -1.48
CCDC71Q8IV32 RNA5SP478-201ENST00000364657 115 ntBASIC5.81□□□□□ -1.48
CCDC71Q8IV32 SNORA77.2-201ENST00000408571 112 ntBASIC5.81□□□□□ -1.48
CCDC71Q8IV32 RNA5SP198-201ENST00000410376 127 ntBASIC5.81□□□□□ -1.48
CCDC71Q8IV32 PMCHL1-203ENST00000423301 697 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CCDC71Q8IV32 AL355994.1-201ENST00000424379 260 ntBASIC5.81□□□□□ -1.48
CCDC71Q8IV32 AC083862.1-201ENST00000427378 1242 ntBASIC5.81□□□□□ -1.48
CCDC71Q8IV32 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CCDC71Q8IV32 AL049594.1-201ENST00000432834 805 ntTSL 3 BASIC5.81□□□□□ -1.48
CCDC71Q8IV32 AMYP1-201ENST00000440059 1023 ntBASIC5.81□□□□□ -1.48
CCDC71Q8IV32 OR2L9P-201ENST00000444456 913 ntBASIC5.81□□□□□ -1.48
CCDC71Q8IV32 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC5.81□□□□□ -1.48
CCDC71Q8IV32 NDUFB2-210ENST00000475276 539 ntTSL 4 BASIC5.81□□□□□ -1.48
CCDC71Q8IV32 KDELR2-206ENST00000490996 655 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CCDC71Q8IV32 AC096746.1-201ENST00000501965 1042 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CCDC71Q8IV32 AC090568.1-201ENST00000509499 856 ntBASIC5.81□□□□□ -1.48
CCDC71Q8IV32 ZNF519P4-201ENST00000514008 125 ntBASIC5.81□□□□□ -1.48
CCDC71Q8IV32 ZNF346-IT1-201ENST00000515264 745 ntTSL 3 BASIC5.81□□□□□ -1.48
CCDC71Q8IV32 RNA5SP418-201ENST00000515951 117 ntBASIC5.81□□□□□ -1.48
CCDC71Q8IV32 IGKV1D-22-201ENST00000518953 324 ntBASIC5.81□□□□□ -1.48
CCDC71Q8IV32 OR7E158P-201ENST00000524483 910 ntBASIC5.81□□□□□ -1.48
CCDC71Q8IV32 PRH1-204ENST00000539853 837 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
CCDC71Q8IV32 AP000619.2-201ENST00000546014 969 ntBASIC5.81□□□□□ -1.48
CCDC71Q8IV32 APAF1-211ENST00000552268 1143 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CCDC71Q8IV32 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC5.81□□□□□ -1.48
CCDC71Q8IV32 AC026898.1-201ENST00000586404 571 ntBASIC5.81□□□□□ -1.48
CCDC71Q8IV32 AC124916.2-201ENST00000604416 224 ntBASIC5.81□□□□□ -1.48
CCDC71Q8IV32 AC009237.12-201ENST00000604755 742 ntBASIC5.81□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 97.7 ms