Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 LY6G6D-223ENST00000375825 402 ntAPPRIS P2 TSL 1 (best) BASIC8.98□□□□□ -0.97
VARS2Q5ST30 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC8.98□□□□□ -0.97
VARS2Q5ST30 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
VARS2Q5ST30 LINC02449-202ENST00000399866 517 ntTSL 3 BASIC8.98□□□□□ -0.97
VARS2Q5ST30 AL359704.1-201ENST00000411586 781 ntBASIC8.98□□□□□ -0.97
VARS2Q5ST30 SEPT7P8-201ENST00000413308 775 ntBASIC8.98□□□□□ -0.97
VARS2Q5ST30 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC8.98□□□□□ -0.97
VARS2Q5ST30 AC093698.1-201ENST00000423843 571 ntBASIC8.98□□□□□ -0.97
VARS2Q5ST30 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC8.98□□□□□ -0.97
VARS2Q5ST30 AC005077.3-202ENST00000437494 300 ntTSL 3 BASIC8.98□□□□□ -0.97
VARS2Q5ST30 H2AFZP6-201ENST00000444403 394 ntBASIC8.98□□□□□ -0.97
VARS2Q5ST30 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC8.98□□□□□ -0.97
VARS2Q5ST30 DLG5-AS1-201ENST00000449852 487 ntTSL 2 BASIC8.98□□□□□ -0.97
VARS2Q5ST30 AC098828.2-201ENST00000452342 573 ntTSL 2 BASIC8.98□□□□□ -0.97
VARS2Q5ST30 AC063943.1-201ENST00000465434 453 ntBASIC8.98□□□□□ -0.97
VARS2Q5ST30 DLX5-202ENST00000486603 1074 ntTSL 2 BASIC8.98□□□□□ -0.97
VARS2Q5ST30 AC114964.1-201ENST00000502306 1111 ntBASIC8.98□□□□□ -0.97
VARS2Q5ST30 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC8.98□□□□□ -0.97
VARS2Q5ST30 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC8.98□□□□□ -0.97
VARS2Q5ST30 AC021151.1-201ENST00000506933 183 ntTSL 3 BASIC8.98□□□□□ -0.97
VARS2Q5ST30 ANKRD55-205ENST00000513241 626 ntTSL 5 BASIC8.98□□□□□ -0.97
VARS2Q5ST30 AC091987.1-202ENST00000522464 789 ntTSL 3 BASIC8.98□□□□□ -0.97
VARS2Q5ST30 AC023050.3-201ENST00000541142 333 ntBASIC8.98□□□□□ -0.97
VARS2Q5ST30 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC8.98□□□□□ -0.97
VARS2Q5ST30 AC137768.1-201ENST00000549998 553 ntBASIC8.98□□□□□ -0.97
VARS2Q5ST30 EIF4A1P4-201ENST00000550578 1213 ntBASIC8.98□□□□□ -0.97
VARS2Q5ST30 AL137230.2-201ENST00000555070 452 ntTSL 3 BASIC8.98□□□□□ -0.97
VARS2Q5ST30 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC8.98□□□□□ -0.97
VARS2Q5ST30 AC087721.1-201ENST00000559959 476 ntTSL 5 BASIC8.98□□□□□ -0.97
VARS2Q5ST30 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC8.98□□□□□ -0.97
VARS2Q5ST30 AC036222.1-201ENST00000579972 701 ntTSL 3 BASIC8.98□□□□□ -0.97
VARS2Q5ST30 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC8.98□□□□□ -0.97
VARS2Q5ST30 AC007998.3-202ENST00000591141 697 ntTSL 3 BASIC8.98□□□□□ -0.97
VARS2Q5ST30 CD209-208ENST00000593821 807 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
VARS2Q5ST30 ZNF83-210ENST00000597161 509 ntTSL 4 BASIC8.98□□□□□ -0.97
VARS2Q5ST30 CYP2C61P-201ENST00000604072 290 ntBASIC8.98□□□□□ -0.97
VARS2Q5ST30 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC8.98□□□□□ -0.97
VARS2Q5ST30 AC096772.1-201ENST00000609146 564 ntBASIC8.98□□□□□ -0.97
VARS2Q5ST30 AL356585.4-201ENST00000623078 1229 ntBASIC8.98□□□□□ -0.97
VARS2Q5ST30 AC022167.5-202ENST00000637237 701 ntAPPRIS P1 TSL 5 BASIC8.98□□□□□ -0.97
VARS2Q5ST30 ZNF410-225ENST00000639051 936 ntTSL 5 BASIC8.98□□□□□ -0.97
VARS2Q5ST30 AL160191.3-201ENST00000619152 2203 ntBASIC8.98□□□□□ -0.97
VARS2Q5ST30 GLDN-202ENST00000396399 4584 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
VARS2Q5ST30 LINC01886-202ENST00000443205 1539 ntTSL 3 BASIC8.98□□□□□ -0.97
VARS2Q5ST30 AC016722.3-201ENST00000568862 2463 ntBASIC8.98□□□□□ -0.97
VARS2Q5ST30 TINAG-201ENST00000259782 1754 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
VARS2Q5ST30 EIF4BP2-201ENST00000416702 1794 ntBASIC8.98□□□□□ -0.97
VARS2Q5ST30 FAM196A-202ENST00000522781 4403 ntAPPRIS P1 TSL 2 BASIC8.98□□□□□ -0.97
VARS2Q5ST30 STN1-202ENST00000369764 1311 ntAPPRIS P1 TSL 2 BASIC8.98□□□□□ -0.97
VARS2Q5ST30 C3P1-202ENST00000497718 4954 ntBASIC8.98□□□□□ -0.97
VARS2Q5ST30 AC090337.1-201ENST00000579651 2074 ntBASIC8.98□□□□□ -0.97
VARS2Q5ST30 CELF2-212ENST00000632728 3827 ntAPPRIS P3 TSL 5 BASIC8.98□□□□□ -0.97
VARS2Q5ST30 RASSF6-203ENST00000342081 4331 ntAPPRIS P4 TSL 2 BASIC8.98□□□□□ -0.97
VARS2Q5ST30 PTPRB-201ENST00000261266 6110 ntAPPRIS ALT2 TSL 1 (best) BASIC8.98□□□□□ -0.97
VARS2Q5ST30 CRYZ-201ENST00000340866 1888 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
VARS2Q5ST30 KIF23-202ENST00000352331 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC8.98□□□□□ -0.97
VARS2Q5ST30 AGTPBP1-202ENST00000357081 4393 ntTSL 5 BASIC8.98□□□□□ -0.97
VARS2Q5ST30 ZNF207-204ENST00000394673 2124 ntAPPRIS P3 TSL 1 (best) BASIC8.98□□□□□ -0.97
VARS2Q5ST30 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC8.98□□□□□ -0.97
VARS2Q5ST30 STXBP5L-206ENST00000492541 3114 ntTSL 5 BASIC8.98□□□□□ -0.97
VARS2Q5ST30 ZNF791-202ENST00000446165 6412 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
VARS2Q5ST30 LUCAT1-203ENST00000513626 2672 ntTSL 2 BASIC8.98□□□□□ -0.97
VARS2Q5ST30 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC8.97□□□□□ -0.97
VARS2Q5ST30 AC010928.1-201ENST00000592477 1447 ntBASIC8.97□□□□□ -0.97
VARS2Q5ST30 SH3BP5-AS1-202ENST00000420195 5570 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
VARS2Q5ST30 PAN2-202ENST00000425394 5372 ntAPPRIS ALT1 TSL 1 (best) BASIC8.97□□□□□ -0.97
VARS2Q5ST30 SETBP1-201ENST00000282030 9899 ntAPPRIS P3 TSL 1 (best) BASIC8.97□□□□□ -0.97
VARS2Q5ST30 CALML4-208ENST00000540479 4603 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
VARS2Q5ST30 CEP128-209ENST00000555265 4662 ntAPPRIS P1 TSL 5 BASIC8.97□□□□□ -0.97
VARS2Q5ST30 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC8.97□□□□□ -0.97
VARS2Q5ST30 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC8.97□□□□□ -0.97
VARS2Q5ST30 BCOR-203ENST00000378455 6338 ntAPPRIS ALT2 TSL 1 (best) BASIC8.97□□□□□ -0.97
VARS2Q5ST30 OR4D9-202ENST00000641278 6063 ntAPPRIS P1 BASIC8.97□□□□□ -0.97
VARS2Q5ST30 LINC01358-207ENST00000634502 2575 ntTSL 5 BASIC8.97□□□□□ -0.97
VARS2Q5ST30 ASAH1-227ENST00000636455 1777 ntTSL 5 BASIC8.97□□□□□ -0.97
VARS2Q5ST30 TANC2-201ENST00000389520 6404 ntTSL 5 BASIC8.97□□□□□ -0.97
VARS2Q5ST30 IL22RA2-201ENST00000296980 2886 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
VARS2Q5ST30 COL28A1-201ENST00000399429 4277 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
VARS2Q5ST30 METTL18-202ENST00000310392 1521 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
VARS2Q5ST30 CAPN3-206ENST00000397163 3228 ntAPPRIS ALT1 TSL 1 (best) BASIC8.97□□□□□ -0.97
VARS2Q5ST30 SMCO2-201ENST00000298876 1122 ntAPPRIS ALT2 TSL 5 BASIC8.97□□□□□ -0.97
VARS2Q5ST30 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
VARS2Q5ST30 OR2G2-201ENST00000320065 954 ntAPPRIS P1 BASIC8.97□□□□□ -0.97
VARS2Q5ST30 CBWD5-205ENST00000377395 1143 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
VARS2Q5ST30 SLC25A5P2-201ENST00000413713 897 ntBASIC8.97□□□□□ -0.97
VARS2Q5ST30 SMCO2-202ENST00000416383 1272 ntAPPRIS P2 TSL 5 BASIC8.97□□□□□ -0.97
VARS2Q5ST30 RPL7P10-201ENST00000417407 739 ntBASIC8.97□□□□□ -0.97
VARS2Q5ST30 RAC1P6-201ENST00000423911 575 ntBASIC8.97□□□□□ -0.97
VARS2Q5ST30 AL606753.1-201ENST00000427435 87 ntBASIC8.97□□□□□ -0.97
VARS2Q5ST30 RPS10P2-201ENST00000430953 494 ntBASIC8.97□□□□□ -0.97
VARS2Q5ST30 OR3B1P-201ENST00000437536 893 ntBASIC8.97□□□□□ -0.97
VARS2Q5ST30 AL137792.2-201ENST00000443484 235 ntBASIC8.97□□□□□ -0.97
VARS2Q5ST30 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC8.97□□□□□ -0.97
VARS2Q5ST30 AL034397.1-201ENST00000456392 908 ntBASIC8.97□□□□□ -0.97
VARS2Q5ST30 RN7SL496P-201ENST00000470372 290 ntBASIC8.97□□□□□ -0.97
VARS2Q5ST30 AP005202.1-201ENST00000489915 867 ntBASIC8.97□□□□□ -0.97
VARS2Q5ST30 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC8.97□□□□□ -0.97
VARS2Q5ST30 Y_RNA.668-201ENST00000516233 93 ntBASIC8.97□□□□□ -0.97
VARS2Q5ST30 OR5B19P-201ENST00000531766 928 ntBASIC8.97□□□□□ -0.97
VARS2Q5ST30 TMEM132D-AS1-206ENST00000541320 440 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Retrieved 100 of 98,524 protein–RNA pairs in 166.4 ms