Protein–RNA interactions for Protein: Q06945

SOX4, Transcription factor SOX-4, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4Q06945 DEUP1-209ENST00000531792 1656 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
SOX4Q06945 SRPX2-201ENST00000373004 6679 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
SOX4Q06945 SLC26A9-202ENST00000367134 4616 ntTSL 5 BASIC7.48□□□□□ -1.21
SOX4Q06945 RBM41-202ENST00000372487 2579 ntAPPRIS ALT1 TSL 2 BASIC7.48□□□□□ -1.21
SOX4Q06945 MLLT3-203ENST00000380338 6772 ntAPPRIS P3 TSL 1 (best) BASIC7.48□□□□□ -1.21
SOX4Q06945 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
SOX4Q06945 LALBA-201ENST00000301046 728 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
SOX4Q06945 ATF3-201ENST00000336937 482 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
SOX4Q06945 RN7SKP191-201ENST00000364713 306 ntBASIC7.48□□□□□ -1.21
SOX4Q06945 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC7.48□□□□□ -1.21
SOX4Q06945 PAGE2B-201ENST00000374971 493 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
SOX4Q06945 RPL5P5-201ENST00000392009 893 ntBASIC7.48□□□□□ -1.21
SOX4Q06945 FCF1P9-201ENST00000412546 282 ntBASIC7.48□□□□□ -1.21
SOX4Q06945 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC7.48□□□□□ -1.21
SOX4Q06945 AL451164.1-201ENST00000417149 390 ntTSL 3 BASIC7.48□□□□□ -1.21
SOX4Q06945 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC7.48□□□□□ -1.21
SOX4Q06945 FAM183DP-201ENST00000421987 399 ntBASIC7.48□□□□□ -1.21
SOX4Q06945 PTPN2P1-201ENST00000423212 1072 ntBASIC7.48□□□□□ -1.21
SOX4Q06945 AL121759.1-202ENST00000425746 387 ntTSL 3 BASIC7.48□□□□□ -1.21
SOX4Q06945 RPL5P34-201ENST00000426545 891 ntBASIC7.48□□□□□ -1.21
SOX4Q06945 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC7.48□□□□□ -1.21
SOX4Q06945 CFAP58-AS1-201ENST00000435434 795 ntTSL 2 BASIC7.48□□□□□ -1.21
SOX4Q06945 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC7.48□□□□□ -1.21
SOX4Q06945 RNF148-202ENST00000447240 839 ntTSL 2 BASIC7.48□□□□□ -1.21
SOX4Q06945 AL133319.1-201ENST00000447848 777 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
SOX4Q06945 RPL31P20-201ENST00000449593 360 ntBASIC7.48□□□□□ -1.21
SOX4Q06945 AC097262.1-201ENST00000452559 548 ntBASIC7.48□□□□□ -1.21
SOX4Q06945 AC067817.2-201ENST00000459965 387 ntTSL 3 BASIC7.48□□□□□ -1.21
SOX4Q06945 RN7SL492P-201ENST00000460700 295 ntBASIC7.48□□□□□ -1.21
SOX4Q06945 RPL5P14-201ENST00000494197 878 ntBASIC7.48□□□□□ -1.21
SOX4Q06945 ZNF138-207ENST00000494380 842 ntTSL 2 BASIC7.48□□□□□ -1.21
SOX4Q06945 AC009567.2-201ENST00000502989 349 ntBASIC7.48□□□□□ -1.21
SOX4Q06945 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC7.48□□□□□ -1.21
SOX4Q06945 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
SOX4Q06945 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC7.48□□□□□ -1.21
SOX4Q06945 OR5AM1P-201ENST00000532136 1032 ntBASIC7.48□□□□□ -1.21
SOX4Q06945 SLC16A4-210ENST00000541986 2496 ntTSL 2 BASIC7.48□□□□□ -1.21
SOX4Q06945 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC7.48□□□□□ -1.21
SOX4Q06945 AC087392.1-201ENST00000576252 820 ntTSL 2 BASIC7.48□□□□□ -1.21
SOX4Q06945 AC010463.3-201ENST00000594077 500 ntBASIC7.48□□□□□ -1.21
SOX4Q06945 AC011516.1-201ENST00000599129 180 ntTSL 3 BASIC7.48□□□□□ -1.21
SOX4Q06945 RPS4XP21-201ENST00000603814 750 ntBASIC7.48□□□□□ -1.21
SOX4Q06945 AP005329.3-201ENST00000609924 686 ntBASIC7.48□□□□□ -1.21
SOX4Q06945 AL359314.1-201ENST00000616913 261 ntBASIC7.48□□□□□ -1.21
SOX4Q06945 MIR6813-201ENST00000621638 56 ntBASIC7.48□□□□□ -1.21
SOX4Q06945 AC022140.2-201ENST00000623500 188 ntBASIC7.48□□□□□ -1.21
SOX4Q06945 AC244517.6-202ENST00000623884 566 ntAPPRIS P1 TSL 4 BASIC7.48□□□□□ -1.21
SOX4Q06945 AC244258.1-201ENST00000637553 1071 ntBASIC7.48□□□□□ -1.21
SOX4Q06945 AC132825.8-201ENST00000640783 297 ntBASIC7.48□□□□□ -1.21
SOX4Q06945 SEC62-201ENST00000337002 6568 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
SOX4Q06945 ZMYND8-221ENST00000619049 4027 ntTSL 5 BASIC7.48□□□□□ -1.21
SOX4Q06945 ADA2-203ENST00000399837 4505 ntAPPRIS P3 TSL 1 (best) BASIC7.48□□□□□ -1.21
SOX4Q06945 SP140-205ENST00000420434 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC7.48□□□□□ -1.21
SOX4Q06945 POGZ-218ENST00000531094 4415 ntAPPRIS ALT1 TSL 2 BASIC7.48□□□□□ -1.21
SOX4Q06945 RGPD3-201ENST00000304514 5510 ntAPPRIS ALT2 TSL 2 BASIC7.48□□□□□ -1.21
SOX4Q06945 MEPE-201ENST00000361056 1986 ntAPPRIS P3 TSL 1 (best) BASIC7.48□□□□□ -1.21
SOX4Q06945 ARHGAP32-202ENST00000392657 6556 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
SOX4Q06945 AC129502.1-201ENST00000623261 1654 ntBASIC7.47□□□□□ -1.21
SOX4Q06945 CACNB4-219ENST00000636108 1698 ntTSL 5 BASIC7.47□□□□□ -1.21
SOX4Q06945 COL21A1-203ENST00000370819 4094 ntAPPRIS ALT1 TSL 1 (best) BASIC7.47□□□□□ -1.21
SOX4Q06945 BTBD7-208ENST00000555525 2328 ntTSL 5 BASIC7.47□□□□□ -1.21
SOX4Q06945 SPATS2-222ENST00000552918 2993 ntAPPRIS P1 TSL 2 BASIC7.47□□□□□ -1.21
SOX4Q06945 ZNF69-202ENST00000429654 2010 ntAPPRIS P1 TSL 2 BASIC7.47□□□□□ -1.21
SOX4Q06945 DCAF13-210ENST00000618975 2038 ntTSL 2 BASIC7.47□□□□□ -1.21
SOX4Q06945 COL6A4P1-202ENST00000487147 4317 ntBASIC7.47□□□□□ -1.21
SOX4Q06945 AL512329.1-201ENST00000404600 1592 ntBASIC7.47□□□□□ -1.21
SOX4Q06945 DOCK8-204ENST00000432829 7452 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
SOX4Q06945 MTND5P24-201ENST00000438892 1767 ntBASIC7.47□□□□□ -1.21
SOX4Q06945 GPR19-203ENST00000540510 1751 ntAPPRIS P1 TSL 2 BASIC7.47□□□□□ -1.21
SOX4Q06945 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
SOX4Q06945 RN7SKP130-201ENST00000364924 301 ntBASIC7.47□□□□□ -1.21
SOX4Q06945 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC7.47□□□□□ -1.21
SOX4Q06945 TAF9BP2-201ENST00000400856 499 ntBASIC7.47□□□□□ -1.21
SOX4Q06945 AL353133.1-201ENST00000407695 401 ntBASIC7.47□□□□□ -1.21
SOX4Q06945 MOB4-205ENST00000409916 829 ntTSL 3 BASIC7.47□□□□□ -1.21
SOX4Q06945 OR6C64P-201ENST00000419708 825 ntBASIC7.47□□□□□ -1.21
SOX4Q06945 GSTA6P-201ENST00000424144 582 ntBASIC7.47□□□□□ -1.21
SOX4Q06945 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC7.47□□□□□ -1.21
SOX4Q06945 MRPS10P2-201ENST00000431226 381 ntBASIC7.47□□□□□ -1.21
SOX4Q06945 CELF2-AS2-202ENST00000432370 1227 ntTSL 5 BASIC7.47□□□□□ -1.21
SOX4Q06945 FTH1P20-201ENST00000434913 548 ntBASIC7.47□□□□□ -1.21
SOX4Q06945 LINC01681-201ENST00000439184 760 ntTSL 2 BASIC7.47□□□□□ -1.21
SOX4Q06945 AC000041.1-201ENST00000439655 175 ntBASIC7.47□□□□□ -1.21
SOX4Q06945 AC068135.1-201ENST00000446164 246 ntBASIC7.47□□□□□ -1.21
SOX4Q06945 AC073072.2-201ENST00000447425 348 ntBASIC7.47□□□□□ -1.21
SOX4Q06945 AC234781.3-201ENST00000452540 973 ntBASIC7.47□□□□□ -1.21
SOX4Q06945 AC022080.2-201ENST00000452932 533 ntBASIC7.47□□□□□ -1.21
SOX4Q06945 MRPL42P4-201ENST00000453267 443 ntBASIC7.47□□□□□ -1.21
SOX4Q06945 Z95152.1-201ENST00000453556 656 ntBASIC7.47□□□□□ -1.21
SOX4Q06945 RPL31P11-202ENST00000454082 372 ntBASIC7.47□□□□□ -1.21
SOX4Q06945 RPS4XP6-201ENST00000477670 797 ntBASIC7.47□□□□□ -1.21
SOX4Q06945 RPS4XP17-201ENST00000479057 754 ntBASIC7.47□□□□□ -1.21
SOX4Q06945 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC7.47□□□□□ -1.21
SOX4Q06945 NAA50-206ENST00000493454 964 ntTSL 2 BASIC7.47□□□□□ -1.21
SOX4Q06945 HMGB1P3-201ENST00000502802 616 ntBASIC7.47□□□□□ -1.21
SOX4Q06945 AC055733.3-201ENST00000505214 523 ntBASIC7.47□□□□□ -1.21
SOX4Q06945 AC079921.2-201ENST00000507579 455 ntTSL 3 BASIC7.47□□□□□ -1.21
SOX4Q06945 AC002401.2-201ENST00000511361 430 ntTSL 3 BASIC7.47□□□□□ -1.21
SOX4Q06945 NREP-223ENST00000515855 801 ntTSL 4 BASIC7.47□□□□□ -1.21
SOX4Q06945 AC090115.2-201ENST00000548060 883 ntBASIC7.47□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 118.2 ms