Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC4.73□□□□□ -1.65
HIST1H1AQ02539 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC4.73□□□□□ -1.65
HIST1H1AQ02539 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
HIST1H1AQ02539 AC022306.1-201ENST00000560489 1562 ntBASIC4.73□□□□□ -1.65
HIST1H1AQ02539 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
HIST1H1AQ02539 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
HIST1H1AQ02539 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
HIST1H1AQ02539 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
HIST1H1AQ02539 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC4.73□□□□□ -1.65
HIST1H1AQ02539 AF121898.1-201ENST00000440763 1860 ntTSL 5 BASIC4.73□□□□□ -1.65
HIST1H1AQ02539 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC4.73□□□□□ -1.65
HIST1H1AQ02539 AL022311.1-201ENST00000623726 19416 ntBASIC4.73□□□□□ -1.65
HIST1H1AQ02539 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
HIST1H1AQ02539 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC4.72□□□□□ -1.65
HIST1H1AQ02539 AC144833.1-201ENST00000567953 4089 ntBASIC4.72□□□□□ -1.65
HIST1H1AQ02539 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC4.72□□□□□ -1.65
HIST1H1AQ02539 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
HIST1H1AQ02539 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC4.72□□□□□ -1.65
HIST1H1AQ02539 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC4.72□□□□□ -1.65
HIST1H1AQ02539 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
HIST1H1AQ02539 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
HIST1H1AQ02539 ADAM24P-201ENST00000398655 2101 ntBASIC4.72□□□□□ -1.65
HIST1H1AQ02539 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
HIST1H1AQ02539 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC4.72□□□□□ -1.65
HIST1H1AQ02539 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC4.72□□□□□ -1.65
HIST1H1AQ02539 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
HIST1H1AQ02539 AL031595.2-201ENST00000624215 19071 ntBASIC4.72□□□□□ -1.65
HIST1H1AQ02539 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
HIST1H1AQ02539 RSPO3-202ENST00000368317 1290 ntTSL 2 BASIC4.72□□□□□ -1.65
HIST1H1AQ02539 MIR1266-201ENST00000408125 84 ntBASIC4.72□□□□□ -1.65
HIST1H1AQ02539 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
HIST1H1AQ02539 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC4.72□□□□□ -1.65
HIST1H1AQ02539 AC114498.1-201ENST00000423796 607 ntTSL 5 BASIC4.72□□□□□ -1.65
HIST1H1AQ02539 ZRANB2-AS1-201ENST00000426999 607 ntTSL 3 BASIC4.72□□□□□ -1.65
HIST1H1AQ02539 AC083862.1-201ENST00000427378 1242 ntBASIC4.72□□□□□ -1.65
HIST1H1AQ02539 MED28P4-201ENST00000433137 572 ntBASIC4.72□□□□□ -1.65
HIST1H1AQ02539 PIK3IP1-AS1-201ENST00000440456 554 ntTSL 3 BASIC4.72□□□□□ -1.65
HIST1H1AQ02539 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
HIST1H1AQ02539 AC005017.1-201ENST00000482002 490 ntBASIC4.72□□□□□ -1.65
HIST1H1AQ02539 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC4.72□□□□□ -1.65
HIST1H1AQ02539 AC010343.2-201ENST00000510162 224 ntBASIC4.72□□□□□ -1.65
HIST1H1AQ02539 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
HIST1H1AQ02539 AC245519.1-201ENST00000522799 512 ntTSL 4 BASIC4.72□□□□□ -1.65
HIST1H1AQ02539 EBF2-204ENST00000535548 1017 ntTSL 2 BASIC4.72□□□□□ -1.65
HIST1H1AQ02539 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC4.72□□□□□ -1.65
HIST1H1AQ02539 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC4.72□□□□□ -1.65
HIST1H1AQ02539 NIFKP4-201ENST00000567275 1192 ntBASIC4.72□□□□□ -1.65
HIST1H1AQ02539 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC4.72□□□□□ -1.65
HIST1H1AQ02539 RN7SL32P-201ENST00000580514 281 ntBASIC4.72□□□□□ -1.65
HIST1H1AQ02539 LINC01855-201ENST00000585520 396 ntTSL 3 BASIC4.72□□□□□ -1.65
HIST1H1AQ02539 GLYATL1P2-202ENST00000588046 902 ntBASIC4.72□□□□□ -1.65
HIST1H1AQ02539 AC073046.2-201ENST00000604756 527 ntBASIC4.72□□□□□ -1.65
HIST1H1AQ02539 AC006924.1-201ENST00000610750 559 ntBASIC4.72□□□□□ -1.65
HIST1H1AQ02539 AL589743.6-201ENST00000611025 117 ntBASIC4.72□□□□□ -1.65
HIST1H1AQ02539 AL589182.1-201ENST00000611785 320 ntTSL 5 BASIC4.72□□□□□ -1.65
HIST1H1AQ02539 AC007204.1-201ENST00000621794 555 ntBASIC4.72□□□□□ -1.65
HIST1H1AQ02539 MIR6503-201ENST00000622884 86 ntBASIC4.72□□□□□ -1.65
HIST1H1AQ02539 AL049767.1-201ENST00000636811 514 ntTSL 5 BASIC4.72□□□□□ -1.65
HIST1H1AQ02539 AC099654.11-201ENST00000638857 294 ntBASIC4.72□□□□□ -1.65
HIST1H1AQ02539 AC114876.1-201ENST00000490962 1366 ntBASIC4.72□□□□□ -1.65
HIST1H1AQ02539 AL353743.3-201ENST00000442109 1468 ntBASIC4.72□□□□□ -1.65
HIST1H1AQ02539 CASC15-201ENST00000444265 1497 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
HIST1H1AQ02539 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
HIST1H1AQ02539 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
HIST1H1AQ02539 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
HIST1H1AQ02539 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
HIST1H1AQ02539 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC4.72□□□□□ -1.65
HIST1H1AQ02539 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
HIST1H1AQ02539 FANCD2P2-201ENST00000437591 1400 ntBASIC4.72□□□□□ -1.65
HIST1H1AQ02539 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
HIST1H1AQ02539 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.65
HIST1H1AQ02539 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
HIST1H1AQ02539 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC4.71□□□□□ -1.65
HIST1H1AQ02539 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.65
HIST1H1AQ02539 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC4.71□□□□□ -1.65
HIST1H1AQ02539 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC4.71□□□□□ -1.65
HIST1H1AQ02539 AL121768.1-201ENST00000613917 2544 ntBASIC4.71□□□□□ -1.66
HIST1H1AQ02539 RPS29-201ENST00000245458 296 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
HIST1H1AQ02539 PIH1D3-201ENST00000336387 993 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
HIST1H1AQ02539 XAGE3-201ENST00000346279 497 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
HIST1H1AQ02539 SNORA5.1-201ENST00000384275 131 ntBASIC4.71□□□□□ -1.66
HIST1H1AQ02539 CAV1-203ENST00000393468 845 ntAPPRIS ALT1 TSL 1 (best) BASIC4.71□□□□□ -1.66
HIST1H1AQ02539 DNAJA1P3-201ENST00000399417 1194 ntBASIC4.71□□□□□ -1.66
HIST1H1AQ02539 AL096800.1-201ENST00000405326 893 ntBASIC4.71□□□□□ -1.66
HIST1H1AQ02539 AL365220.1-201ENST00000432923 399 ntBASIC4.71□□□□□ -1.66
HIST1H1AQ02539 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC4.71□□□□□ -1.66
HIST1H1AQ02539 FBXW12-203ENST00000436231 1117 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
HIST1H1AQ02539 AC234771.4-201ENST00000441416 730 ntBASIC4.71□□□□□ -1.66
HIST1H1AQ02539 NPM1P19-201ENST00000450070 712 ntBASIC4.71□□□□□ -1.66
HIST1H1AQ02539 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC4.71□□□□□ -1.66
HIST1H1AQ02539 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC4.71□□□□□ -1.66
HIST1H1AQ02539 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
HIST1H1AQ02539 AC096746.1-201ENST00000501965 1042 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
HIST1H1AQ02539 CYP4F27P-201ENST00000514557 494 ntBASIC4.71□□□□□ -1.66
HIST1H1AQ02539 ATP6V0E1-202ENST00000517669 502 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
HIST1H1AQ02539 AC099805.1-205ENST00000521794 837 ntTSL 2 BASIC4.71□□□□□ -1.66
HIST1H1AQ02539 AC027026.1-201ENST00000532323 742 ntBASIC4.71□□□□□ -1.66
HIST1H1AQ02539 RBM7-208ENST00000545678 867 ntTSL 3 BASIC4.71□□□□□ -1.66
HIST1H1AQ02539 AC080011.1-201ENST00000552378 989 ntTSL 3 BASIC4.71□□□□□ -1.66
HIST1H1AQ02539 AC037479.1-201ENST00000558361 625 ntBASIC4.71□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms