Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
RPL39P62891 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
RPL39P62891 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
RPL39P62891 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC4.16□□□□□ -1.74
RPL39P62891 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC4.16□□□□□ -1.74
RPL39P62891 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
RPL39P62891 ZNF710-AS1-202ENST00000620791 2133 ntBASIC4.15□□□□□ -1.74
RPL39P62891 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC4.15□□□□□ -1.74
RPL39P62891 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC4.15□□□□□ -1.74
RPL39P62891 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC4.15□□□□□ -1.74
RPL39P62891 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
RPL39P62891 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC4.15□□□□□ -1.74
RPL39P62891 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
RPL39P62891 OR4F21-201ENST00000320901 995 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
RPL39P62891 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
RPL39P62891 XAGE3-202ENST00000375491 489 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
RPL39P62891 SNORA5.1-201ENST00000384275 131 ntBASIC4.15□□□□□ -1.75
RPL39P62891 AC026310.1-201ENST00000396004 378 ntBASIC4.15□□□□□ -1.75
RPL39P62891 COX7B2-202ENST00000396533 617 ntAPPRIS P2 TSL 1 (best) BASIC4.15□□□□□ -1.75
RPL39P62891 PLGLB1-202ENST00000409310 960 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
RPL39P62891 RNA5SP155-201ENST00000411154 129 ntBASIC4.15□□□□□ -1.75
RPL39P62891 AL096829.1-201ENST00000413677 457 ntBASIC4.15□□□□□ -1.75
RPL39P62891 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC4.15□□□□□ -1.75
RPL39P62891 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC4.15□□□□□ -1.75
RPL39P62891 NMD3P2-201ENST00000421815 761 ntBASIC4.15□□□□□ -1.75
RPL39P62891 OSTCP4-201ENST00000424397 449 ntBASIC4.15□□□□□ -1.75
RPL39P62891 VTI1BP4-201ENST00000427516 527 ntBASIC4.15□□□□□ -1.75
RPL39P62891 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
RPL39P62891 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC4.15□□□□□ -1.75
RPL39P62891 OR3D1P-201ENST00000438288 955 ntBASIC4.15□□□□□ -1.75
RPL39P62891 AL663074.2-201ENST00000440621 479 ntBASIC4.15□□□□□ -1.75
RPL39P62891 RPS7P4-201ENST00000444127 582 ntBASIC4.15□□□□□ -1.75
RPL39P62891 AL356133.1-201ENST00000444762 372 ntBASIC4.15□□□□□ -1.75
RPL39P62891 POU5F1P5-201ENST00000445059 658 ntBASIC4.15□□□□□ -1.75
RPL39P62891 AC023271.1-201ENST00000445936 1090 ntBASIC4.15□□□□□ -1.75
RPL39P62891 RN7SL197P-201ENST00000466981 299 ntBASIC4.15□□□□□ -1.75
RPL39P62891 RN7SL350P-201ENST00000492591 299 ntBASIC4.15□□□□□ -1.75
RPL39P62891 LINC02196-201ENST00000512838 568 ntTSL 4 BASIC4.15□□□□□ -1.75
RPL39P62891 LINC01618-201ENST00000514957 727 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
RPL39P62891 AC008708.1-201ENST00000517346 474 ntTSL 3 BASIC4.15□□□□□ -1.75
RPL39P62891 C8orf44-205ENST00000521889 598 ntAPPRIS ALT2 TSL 3 BASIC4.15□□□□□ -1.75
RPL39P62891 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC4.15□□□□□ -1.75
RPL39P62891 OR56A7P-201ENST00000524865 941 ntBASIC4.15□□□□□ -1.75
RPL39P62891 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC4.15□□□□□ -1.75
RPL39P62891 RPL41P2-201ENST00000544920 409 ntBASIC4.15□□□□□ -1.75
RPL39P62891 AC079600.3-201ENST00000547898 447 ntTSL 5 BASIC4.15□□□□□ -1.75
RPL39P62891 OTX2-203ENST00000554559 715 ntTSL 5 BASIC4.15□□□□□ -1.75
RPL39P62891 AL132989.1-201ENST00000557322 576 ntTSL 3 BASIC4.15□□□□□ -1.75
RPL39P62891 AC025040.1-201ENST00000560375 1284 ntTSL 2 BASIC4.15□□□□□ -1.75
RPL39P62891 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC4.15□□□□□ -1.75
RPL39P62891 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC4.15□□□□□ -1.75
RPL39P62891 AL163952.1-202ENST00000569625 600 ntBASIC4.15□□□□□ -1.75
RPL39P62891 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC4.15□□□□□ -1.75
RPL39P62891 AC006305.2-201ENST00000589617 552 ntTSL 4 BASIC4.15□□□□□ -1.75
RPL39P62891 AL353807.4-201ENST00000604995 257 ntBASIC4.15□□□□□ -1.75
RPL39P62891 AC247036.1-201ENST00000605005 389 ntTSL 2 BASIC4.15□□□□□ -1.75
RPL39P62891 AC244100.1-201ENST00000618141 407 ntTSL 5 BASIC4.15□□□□□ -1.75
RPL39P62891 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC4.15□□□□□ -1.75
RPL39P62891 AC005355.2-201ENST00000625064 484 ntBASIC4.15□□□□□ -1.75
RPL39P62891 AC084816.1-204ENST00000628326 631 ntTSL 5 BASIC4.15□□□□□ -1.75
RPL39P62891 ASB8-218ENST00000629941 278 ntTSL 5 BASIC4.15□□□□□ -1.75
RPL39P62891 CCDC125-201ENST00000383374 2006 ntTSL 5 BASIC4.15□□□□□ -1.75
RPL39P62891 Z95114.1-201ENST00000624264 14574 ntBASIC4.15□□□□□ -1.75
RPL39P62891 LGALS8-220ENST00000526634 1852 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.75
RPL39P62891 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
RPL39P62891 ABCC13-202ENST00000463099 3842 ntBASIC4.15□□□□□ -1.75
RPL39P62891 REG1CP-201ENST00000377435 1705 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
RPL39P62891 AC013268.3-201ENST00000262716 2324 ntBASIC4.15□□□□□ -1.75
RPL39P62891 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.75
RPL39P62891 AP001029.2-203ENST00000589795 4910 ntBASIC4.14□□□□□ -1.75
RPL39P62891 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
RPL39P62891 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
RPL39P62891 B3GNT5-206ENST00000465010 1766 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
RPL39P62891 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
RPL39P62891 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
RPL39P62891 RNASE13-201ENST00000382951 1607 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
RPL39P62891 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC4.14□□□□□ -1.75
RPL39P62891 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC4.14□□□□□ -1.75
RPL39P62891 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC4.14□□□□□ -1.75
RPL39P62891 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC4.14□□□□□ -1.75
RPL39P62891 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
RPL39P62891 LINC02352-202ENST00000559292 1450 ntTSL 5 BASIC4.14□□□□□ -1.75
RPL39P62891 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
RPL39P62891 TCEAL8-201ENST00000360000 1131 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
RPL39P62891 RNA5SP302-201ENST00000364896 100 ntBASIC4.14□□□□□ -1.75
RPL39P62891 RNA5SP211-201ENST00000365516 117 ntBASIC4.14□□□□□ -1.75
RPL39P62891 TCEAL8-202ENST00000372685 1222 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
RPL39P62891 ATP5EP2-201ENST00000381026 385 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
RPL39P62891 SNORA70.6-201ENST00000383934 134 ntBASIC4.14□□□□□ -1.75
RPL39P62891 TRAV27-201ENST00000390457 425 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
RPL39P62891 MIR301B-201ENST00000390813 78 ntBASIC4.14□□□□□ -1.75
RPL39P62891 AL157702.1-201ENST00000398764 426 ntBASIC4.14□□□□□ -1.75
RPL39P62891 RNA5SP156-201ENST00000410250 110 ntBASIC4.14□□□□□ -1.75
RPL39P62891 RN7SKP39-201ENST00000410773 322 ntBASIC4.14□□□□□ -1.75
RPL39P62891 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC4.14□□□□□ -1.75
RPL39P62891 NPM1P18-201ENST00000434232 732 ntBASIC4.14□□□□□ -1.75
RPL39P62891 AC003991.1-210ENST00000434733 1048 ntTSL 3 BASIC4.14□□□□□ -1.75
RPL39P62891 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC4.14□□□□□ -1.75
RPL39P62891 RPS10P14-201ENST00000440748 502 ntBASIC4.14□□□□□ -1.75
RPL39P62891 GAPDHP37-201ENST00000442317 968 ntBASIC4.14□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms