Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 RNU1-24P-201ENST00000364285 165 ntBASIC7.43□□□□□ -1.22
RHBDL3P58872 MIR323B-201ENST00000385269 82 ntBASIC7.43□□□□□ -1.22
RHBDL3P58872 HMGN1P20-201ENST00000411849 300 ntBASIC7.43□□□□□ -1.22
RHBDL3P58872 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC7.43□□□□□ -1.22
RHBDL3P58872 OR3D1P-201ENST00000438288 955 ntBASIC7.43□□□□□ -1.22
RHBDL3P58872 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC7.43□□□□□ -1.22
RHBDL3P58872 RPL31P20-201ENST00000449593 360 ntBASIC7.43□□□□□ -1.22
RHBDL3P58872 AC098847.1-201ENST00000473094 348 ntBASIC7.43□□□□□ -1.22
RHBDL3P58872 PANCR-201ENST00000503456 493 ntTSL 5 BASIC7.43□□□□□ -1.22
RHBDL3P58872 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC7.43□□□□□ -1.22
RHBDL3P58872 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC7.43□□□□□ -1.22
RHBDL3P58872 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC7.43□□□□□ -1.22
RHBDL3P58872 IGKV3D-34-201ENST00000522638 302 ntBASIC7.43□□□□□ -1.22
RHBDL3P58872 AC021269.1-201ENST00000526860 705 ntBASIC7.43□□□□□ -1.22
RHBDL3P58872 LDHC-203ENST00000535809 757 ntTSL 5 BASIC7.43□□□□□ -1.22
RHBDL3P58872 LDHC-205ENST00000537486 583 ntTSL 5 BASIC7.43□□□□□ -1.22
RHBDL3P58872 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC7.43□□□□□ -1.22
RHBDL3P58872 WDR61-205ENST00000558459 884 ntTSL 3 BASIC7.43□□□□□ -1.22
RHBDL3P58872 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC7.43□□□□□ -1.22
RHBDL3P58872 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC7.43□□□□□ -1.22
RHBDL3P58872 MIR3614-201ENST00000581261 86 ntBASIC7.43□□□□□ -1.22
RHBDL3P58872 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC7.43□□□□□ -1.22
RHBDL3P58872 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC7.43□□□□□ -1.22
RHBDL3P58872 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC7.43□□□□□ -1.22
RHBDL3P58872 AC008833.1-201ENST00000611633 691 ntBASIC7.43□□□□□ -1.22
RHBDL3P58872 AL445649.1-201ENST00000615941 691 ntBASIC7.43□□□□□ -1.22
RHBDL3P58872 RPGRIP1L-206ENST00000564374 3877 ntTSL 2 BASIC7.43□□□□□ -1.22
RHBDL3P58872 ALG13-202ENST00000371979 2770 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
RHBDL3P58872 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC7.43□□□□□ -1.22
RHBDL3P58872 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
RHBDL3P58872 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC7.43□□□□□ -1.22
RHBDL3P58872 SORBS2-230ENST00000448662 4356 ntTSL 2 BASIC7.43□□□□□ -1.22
RHBDL3P58872 RBMY1HP-201ENST00000382759 1389 ntBASIC7.43□□□□□ -1.22
RHBDL3P58872 EEF1A1P24-201ENST00000451469 1378 ntBASIC7.43□□□□□ -1.22
RHBDL3P58872 AC022325.1-201ENST00000502748 2199 ntBASIC7.43□□□□□ -1.22
RHBDL3P58872 FGFR1OP-202ENST00000366847 14166 ntAPPRIS P4 TSL 1 (best) BASIC7.43□□□□□ -1.22
RHBDL3P58872 ZNF292-202ENST00000369577 10610 ntAPPRIS P2 TSL 1 (best) BASIC7.43□□□□□ -1.22
RHBDL3P58872 IL31RA-202ENST00000354961 2658 ntAPPRIS ALT2 TSL 5 BASIC7.43□□□□□ -1.22
RHBDL3P58872 AC110373.1-201ENST00000505994 3505 ntBASIC7.43□□□□□ -1.22
RHBDL3P58872 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
RHBDL3P58872 CYP2G2P-201ENST00000594920 1485 ntBASIC7.43□□□□□ -1.22
RHBDL3P58872 OR7A17-202ENST00000641113 3639 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
RHBDL3P58872 TGFB2-202ENST00000366930 4969 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
RHBDL3P58872 AC034229.2-201ENST00000566945 2508 ntBASIC7.42□□□□□ -1.22
RHBDL3P58872 AP003175.1-201ENST00000641383 6658 ntBASIC7.42□□□□□ -1.22
RHBDL3P58872 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC7.42□□□□□ -1.22
RHBDL3P58872 ANK2-212ENST00000506722 8051 ntAPPRIS ALT2 TSL 1 (best) BASIC7.42□□□□□ -1.22
RHBDL3P58872 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
RHBDL3P58872 UGT2B27P-201ENST00000505092 1620 ntBASIC7.42□□□□□ -1.22
RHBDL3P58872 IL1RL1-202ENST00000311734 3994 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
RHBDL3P58872 NFAT5-201ENST00000349945 13362 ntAPPRIS ALT1 TSL 1 (best) BASIC7.42□□□□□ -1.22
RHBDL3P58872 RNFT1P3-201ENST00000340898 1052 ntBASIC7.42□□□□□ -1.22
RHBDL3P58872 RNU1-134P-201ENST00000362935 165 ntBASIC7.42□□□□□ -1.22
RHBDL3P58872 OR13C3-201ENST00000374781 1108 ntBASIC7.42□□□□□ -1.22
RHBDL3P58872 AL445238.1-204ENST00000400311 463 ntBASIC7.42□□□□□ -1.22
RHBDL3P58872 SLC20A1P1-201ENST00000413906 956 ntBASIC7.42□□□□□ -1.22
RHBDL3P58872 AL512504.1-201ENST00000415494 778 ntBASIC7.42□□□□□ -1.22
RHBDL3P58872 AC097721.1-201ENST00000427150 1253 ntBASIC7.42□□□□□ -1.22
RHBDL3P58872 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC7.42□□□□□ -1.22
RHBDL3P58872 ARL5AP3-201ENST00000439327 386 ntBASIC7.42□□□□□ -1.22
RHBDL3P58872 AC114878.1-201ENST00000441166 358 ntBASIC7.42□□□□□ -1.22
RHBDL3P58872 AC073109.1-201ENST00000445066 978 ntBASIC7.42□□□□□ -1.22
RHBDL3P58872 AC092967.1-201ENST00000449016 481 ntBASIC7.42□□□□□ -1.22
RHBDL3P58872 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC7.42□□□□□ -1.22
RHBDL3P58872 OR5H7P-201ENST00000514084 930 ntBASIC7.42□□□□□ -1.22
RHBDL3P58872 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC7.42□□□□□ -1.22
RHBDL3P58872 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC7.42□□□□□ -1.22
RHBDL3P58872 CRYAB-205ENST00000526180 1017 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
RHBDL3P58872 AP001804.2-201ENST00000533932 910 ntBASIC7.42□□□□□ -1.22
RHBDL3P58872 PTER-205ENST00000535784 1203 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
RHBDL3P58872 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC7.42□□□□□ -1.22
RHBDL3P58872 AC068305.2-201ENST00000550567 1205 ntBASIC7.42□□□□□ -1.22
RHBDL3P58872 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC7.42□□□□□ -1.22
RHBDL3P58872 AC007956.1-201ENST00000555623 542 ntBASIC7.42□□□□□ -1.22
RHBDL3P58872 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC7.42□□□□□ -1.22
RHBDL3P58872 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC7.42□□□□□ -1.22
RHBDL3P58872 AP005119.1-201ENST00000580956 292 ntBASIC7.42□□□□□ -1.22
RHBDL3P58872 AC027229.1-201ENST00000583887 253 ntBASIC7.42□□□□□ -1.22
RHBDL3P58872 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC7.42□□□□□ -1.22
RHBDL3P58872 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
RHBDL3P58872 AL583832.1-201ENST00000603227 784 ntBASIC7.42□□□□□ -1.22
RHBDL3P58872 LAPTM4BP2-201ENST00000604542 446 ntBASIC7.42□□□□□ -1.22
RHBDL3P58872 BX322635.1-201ENST00000605804 496 ntBASIC7.42□□□□□ -1.22
RHBDL3P58872 AC006924.1-201ENST00000610750 559 ntBASIC7.42□□□□□ -1.22
RHBDL3P58872 AC024255.1-201ENST00000614376 102 ntBASIC7.42□□□□□ -1.22
RHBDL3P58872 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
RHBDL3P58872 AC123769.2-201ENST00000624332 5984 ntBASIC7.42□□□□□ -1.22
RHBDL3P58872 ZNF329-203ENST00000597186 3930 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
RHBDL3P58872 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
RHBDL3P58872 SRGAP1-206ENST00000543397 5652 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
RHBDL3P58872 DCX-203ENST00000371993 9231 ntAPPRIS ALT1 TSL 5 BASIC7.42□□□□□ -1.22
RHBDL3P58872 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
RHBDL3P58872 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC7.42□□□□□ -1.22
RHBDL3P58872 NRK-201ENST00000243300 8062 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
RHBDL3P58872 CD96-202ENST00000352690 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC7.42□□□□□ -1.22
RHBDL3P58872 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC7.42□□□□□ -1.22
RHBDL3P58872 AC092111.1-201ENST00000618256 3358 ntBASIC7.42□□□□□ -1.22
RHBDL3P58872 FANCD2-201ENST00000287647 5219 ntAPPRIS P3 TSL 1 (best) BASIC7.42□□□□□ -1.22
RHBDL3P58872 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC7.42□□□□□ -1.22
RHBDL3P58872 MTND5P23-201ENST00000430812 1655 ntBASIC7.41□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 146.1 ms