Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 RN7SL350P-201ENST00000492591 299 ntBASIC6.14□□□□□ -1.43
NR1H2P55055 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
NR1H2P55055 NACAP5-201ENST00000509863 636 ntBASIC6.14□□□□□ -1.43
NR1H2P55055 AP005902.2-201ENST00000518393 307 ntBASIC6.14□□□□□ -1.43
NR1H2P55055 OXR1-212ENST00000521592 993 ntTSL 5 BASIC6.14□□□□□ -1.43
NR1H2P55055 OR8K2P-201ENST00000524645 927 ntBASIC6.14□□□□□ -1.43
NR1H2P55055 ACER3-213ENST00000533873 929 ntTSL 2 BASIC6.14□□□□□ -1.43
NR1H2P55055 AC073916.1-201ENST00000545095 130 ntBASIC6.14□□□□□ -1.43
NR1H2P55055 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC6.14□□□□□ -1.43
NR1H2P55055 TTC39C-204ENST00000577185 533 ntTSL 3 BASIC6.14□□□□□ -1.43
NR1H2P55055 MIR4312-201ENST00000579909 76 ntBASIC6.14□□□□□ -1.43
NR1H2P55055 LINC01855-201ENST00000585520 396 ntTSL 3 BASIC6.14□□□□□ -1.43
NR1H2P55055 AC040963.1-201ENST00000591900 564 ntTSL 4 BASIC6.14□□□□□ -1.43
NR1H2P55055 HOXA11-AS1_3.1-201ENST00000613383 98 ntBASIC6.14□□□□□ -1.43
NR1H2P55055 RN7SL126P-201ENST00000616400 299 ntBASIC6.14□□□□□ -1.43
NR1H2P55055 AL109620.1-201ENST00000618738 1197 ntBASIC6.14□□□□□ -1.43
NR1H2P55055 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC6.14□□□□□ -1.43
NR1H2P55055 UBA3-213ENST00000631029 123 ntTSL 5 BASIC6.14□□□□□ -1.43
NR1H2P55055 AC079753.1-201ENST00000623243 3868 ntBASIC6.14□□□□□ -1.43
NR1H2P55055 CDC7-203ENST00000428239 3313 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
NR1H2P55055 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
NR1H2P55055 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
NR1H2P55055 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
NR1H2P55055 AL356361.1-201ENST00000400943 1459 ntBASIC6.14□□□□□ -1.43
NR1H2P55055 USP46-202ENST00000451218 4622 ntTSL 5 BASIC6.14□□□□□ -1.43
NR1H2P55055 BMP10-201ENST00000295379 1584 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
NR1H2P55055 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC6.14□□□□□ -1.43
NR1H2P55055 Z97989.1-201ENST00000531702 2421 ntBASIC6.14□□□□□ -1.43
NR1H2P55055 C2CD6-203ENST00000439802 1639 ntAPPRIS ALT2 TSL 2 BASIC6.14□□□□□ -1.43
NR1H2P55055 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC6.14□□□□□ -1.43
NR1H2P55055 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
NR1H2P55055 KANTR-203ENST00000604062 4251 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
NR1H2P55055 UEVLD-202ENST00000320750 1799 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
NR1H2P55055 AC003973.3-201ENST00000624863 2822 ntBASIC6.13□□□□□ -1.43
NR1H2P55055 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
NR1H2P55055 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC6.13□□□□□ -1.43
NR1H2P55055 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
NR1H2P55055 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC6.13□□□□□ -1.43
NR1H2P55055 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC6.13□□□□□ -1.43
NR1H2P55055 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
NR1H2P55055 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
NR1H2P55055 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
NR1H2P55055 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
NR1H2P55055 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
NR1H2P55055 AC092634.1-201ENST00000366505 199 ntBASIC6.13□□□□□ -1.43
NR1H2P55055 ST3GAL3-212ENST00000372362 468 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
NR1H2P55055 ATP5EP2-201ENST00000381026 385 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
NR1H2P55055 RNU6-729P-201ENST00000384399 107 ntBASIC6.13□□□□□ -1.43
NR1H2P55055 AL121835.1-201ENST00000404250 354 ntBASIC6.13□□□□□ -1.43
NR1H2P55055 AL359715.1-201ENST00000404330 555 ntBASIC6.13□□□□□ -1.43
NR1H2P55055 AL359922.1-201ENST00000404796 935 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
NR1H2P55055 MRPS21P2-201ENST00000424704 264 ntBASIC6.13□□□□□ -1.43
NR1H2P55055 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
NR1H2P55055 AC245140.1-201ENST00000433825 341 ntTSL 5 BASIC6.13□□□□□ -1.43
NR1H2P55055 HMGB3P10-201ENST00000434734 572 ntBASIC6.13□□□□□ -1.43
NR1H2P55055 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC6.13□□□□□ -1.43
NR1H2P55055 AL138899.2-201ENST00000439139 499 ntBASIC6.13□□□□□ -1.43
NR1H2P55055 AC064862.5-201ENST00000440618 334 ntBASIC6.13□□□□□ -1.43
NR1H2P55055 HBG2-204ENST00000444587 307 ntTSL 2 BASIC6.13□□□□□ -1.43
NR1H2P55055 AC114814.1-201ENST00000444926 691 ntTSL 3 BASIC6.13□□□□□ -1.43
NR1H2P55055 RPL5P10-201ENST00000445207 894 ntBASIC6.13□□□□□ -1.43
NR1H2P55055 CCNJP2-201ENST00000457810 1163 ntBASIC6.13□□□□□ -1.43
NR1H2P55055 AC108751.3-201ENST00000461814 1020 ntBASIC6.13□□□□□ -1.43
NR1H2P55055 RPL23AP8-201ENST00000479812 475 ntBASIC6.13□□□□□ -1.43
NR1H2P55055 NPM1P27-201ENST00000502784 830 ntBASIC6.13□□□□□ -1.43
NR1H2P55055 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC6.13□□□□□ -1.43
NR1H2P55055 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC6.13□□□□□ -1.43
NR1H2P55055 FABP5P6-201ENST00000510588 409 ntBASIC6.13□□□□□ -1.43
NR1H2P55055 RNU6-889P-201ENST00000517189 103 ntBASIC6.13□□□□□ -1.43
NR1H2P55055 AC104109.4-202ENST00000518409 1082 ntTSL 2 BASIC6.13□□□□□ -1.43
NR1H2P55055 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC6.13□□□□□ -1.43
NR1H2P55055 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC6.13□□□□□ -1.43
NR1H2P55055 H2AFV-208ENST00000521529 439 ntTSL 5 BASIC6.13□□□□□ -1.43
NR1H2P55055 ST3GAL3-232ENST00000531451 420 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
NR1H2P55055 AC100768.2-201ENST00000534068 683 ntTSL 3 BASIC6.13□□□□□ -1.43
NR1H2P55055 AC025419.1-203ENST00000540652 726 ntTSL 3 BASIC6.13□□□□□ -1.43
NR1H2P55055 AC090181.1-201ENST00000560446 264 ntTSL 3 BASIC6.13□□□□□ -1.43
NR1H2P55055 LINC00557-201ENST00000563184 1279 ntBASIC6.13□□□□□ -1.43
NR1H2P55055 AC015818.3-202ENST00000579603 283 ntTSL 5 BASIC6.13□□□□□ -1.43
NR1H2P55055 MIR4428-201ENST00000584884 73 ntBASIC6.13□□□□□ -1.43
NR1H2P55055 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC6.13□□□□□ -1.43
NR1H2P55055 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC6.13□□□□□ -1.43
NR1H2P55055 BMS1P7-201ENST00000602440 1052 ntBASIC6.13□□□□□ -1.43
NR1H2P55055 RPL12P48-201ENST00000605620 304 ntBASIC6.13□□□□□ -1.43
NR1H2P55055 AL356608.1-201ENST00000610034 820 ntBASIC6.13□□□□□ -1.43
NR1H2P55055 AC015819.1-201ENST00000613588 663 ntBASIC6.13□□□□□ -1.43
NR1H2P55055 MIR663AHG-237ENST00000615682 1030 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
NR1H2P55055 Six3os1_2.1-201ENST00000616963 217 ntBASIC6.13□□□□□ -1.43
NR1H2P55055 LINC01676-209ENST00000623043 896 ntTSL 4 BASIC6.13□□□□□ -1.43
NR1H2P55055 AP000720.1-201ENST00000625091 483 ntBASIC6.13□□□□□ -1.43
NR1H2P55055 MBD5-221ENST00000637159 902 ntTSL 5 BASIC6.13□□□□□ -1.43
NR1H2P55055 AP000550.3-201ENST00000637734 379 ntBASIC6.13□□□□□ -1.43
NR1H2P55055 AC022613.3-201ENST00000560740 1346 ntBASIC6.13□□□□□ -1.43
NR1H2P55055 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
NR1H2P55055 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC6.13□□□□□ -1.43
NR1H2P55055 PSG6-204ENST00000402603 1412 ntTSL 5 BASIC6.13□□□□□ -1.43
NR1H2P55055 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
NR1H2P55055 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC6.13□□□□□ -1.43
NR1H2P55055 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC6.13□□□□□ -1.43
NR1H2P55055 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 69 ms