Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 RNA5SP53-201ENST00000391299 120 ntBASIC5.85□□□□□ -1.47
GTF2A1P52655 ZNF705B-201ENST00000400120 1207 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
GTF2A1P52655 AL358176.3-201ENST00000420757 454 ntBASIC5.85□□□□□ -1.47
GTF2A1P52655 KCND3-AS1-202ENST00000427471 583 ntTSL 3 BASIC5.85□□□□□ -1.47
GTF2A1P52655 AL513303.1-201ENST00000432452 591 ntTSL 2 BASIC5.85□□□□□ -1.47
GTF2A1P52655 AC016396.1-201ENST00000440189 328 ntTSL 3 BASIC5.85□□□□□ -1.47
GTF2A1P52655 RPL29P7-201ENST00000440227 457 ntBASIC5.85□□□□□ -1.47
GTF2A1P52655 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC5.85□□□□□ -1.47
GTF2A1P52655 RPSAP48-201ENST00000466509 889 ntBASIC5.85□□□□□ -1.47
GTF2A1P52655 RN7SL216P-201ENST00000471607 298 ntBASIC5.85□□□□□ -1.47
GTF2A1P52655 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
GTF2A1P52655 RPL7AP56-201ENST00000476420 791 ntBASIC5.85□□□□□ -1.47
GTF2A1P52655 SNX18P23-201ENST00000510867 677 ntBASIC5.85□□□□□ -1.47
GTF2A1P52655 AC017007.1-201ENST00000511960 415 ntBASIC5.85□□□□□ -1.47
GTF2A1P52655 AC008906.1-201ENST00000512856 993 ntTSL 5 BASIC5.85□□□□□ -1.47
GTF2A1P52655 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC5.85□□□□□ -1.47
GTF2A1P52655 AC078860.1-201ENST00000546601 527 ntTSL 2 BASIC5.85□□□□□ -1.47
GTF2A1P52655 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC5.85□□□□□ -1.47
GTF2A1P52655 AC110603.1-201ENST00000580645 468 ntTSL 3 BASIC5.85□□□□□ -1.47
GTF2A1P52655 ZNF397-211ENST00000592264 1104 ntTSL 3 BASIC5.85□□□□□ -1.47
GTF2A1P52655 AC026367.3-201ENST00000619032 590 ntBASIC5.85□□□□□ -1.47
GTF2A1P52655 AP001264.1-201ENST00000620602 703 ntBASIC5.85□□□□□ -1.47
GTF2A1P52655 AC024475.3-203ENST00000634971 854 ntTSL 5 BASIC5.85□□□□□ -1.47
GTF2A1P52655 LINC01141-204ENST00000635564 1008 ntTSL 5 BASIC5.85□□□□□ -1.47
GTF2A1P52655 5_8S_rRNA.6-201ENST00000637374 152 ntBASIC5.85□□□□□ -1.47
GTF2A1P52655 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
GTF2A1P52655 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
GTF2A1P52655 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
GTF2A1P52655 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
GTF2A1P52655 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
GTF2A1P52655 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
GTF2A1P52655 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
GTF2A1P52655 PRKAR1A-204ENST00000536854 3697 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
GTF2A1P52655 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
GTF2A1P52655 AL449283.1-201ENST00000602631 3403 ntBASIC5.84□□□□□ -1.47
GTF2A1P52655 AC024587.1-201ENST00000505925 2157 ntBASIC5.84□□□□□ -1.47
GTF2A1P52655 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
GTF2A1P52655 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
GTF2A1P52655 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC5.84□□□□□ -1.47
GTF2A1P52655 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
GTF2A1P52655 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
GTF2A1P52655 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
GTF2A1P52655 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
GTF2A1P52655 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
GTF2A1P52655 SNRPG-201ENST00000272348 625 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
GTF2A1P52655 VNN3-201ENST00000275223 1260 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
GTF2A1P52655 AC064874.1-201ENST00000409661 441 ntTSL 3 BASIC5.84□□□□□ -1.47
GTF2A1P52655 AL157932.1-201ENST00000413246 363 ntTSL 3 BASIC5.84□□□□□ -1.47
GTF2A1P52655 RPL12P10-201ENST00000413498 498 ntBASIC5.84□□□□□ -1.47
GTF2A1P52655 CCR8-202ENST00000414803 1078 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
GTF2A1P52655 RPS7P12-201ENST00000422385 582 ntBASIC5.84□□□□□ -1.47
GTF2A1P52655 AC093107.1-201ENST00000422772 609 ntBASIC5.84□□□□□ -1.47
GTF2A1P52655 AL121917.1-202ENST00000424434 367 ntTSL 3 BASIC5.84□□□□□ -1.47
GTF2A1P52655 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC5.84□□□□□ -1.47
GTF2A1P52655 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC5.84□□□□□ -1.47
GTF2A1P52655 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC5.84□□□□□ -1.47
GTF2A1P52655 SNX18P9-201ENST00000440580 835 ntBASIC5.84□□□□□ -1.47
GTF2A1P52655 AC133965.1-201ENST00000452984 354 ntBASIC5.84□□□□□ -1.47
GTF2A1P52655 AL391863.1-202ENST00000457427 612 ntTSL 5 BASIC5.84□□□□□ -1.47
GTF2A1P52655 SNORA35.1-201ENST00000458908 128 ntBASIC5.84□□□□□ -1.47
GTF2A1P52655 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC5.84□□□□□ -1.47
GTF2A1P52655 PPP1R2P6-201ENST00000478565 588 ntBASIC5.84□□□□□ -1.47
GTF2A1P52655 PTTG2-201ENST00000504686 691 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
GTF2A1P52655 LINC01184-206ENST00000508878 968 ntTSL 5 BASIC5.84□□□□□ -1.47
GTF2A1P52655 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC5.84□□□□□ -1.47
GTF2A1P52655 MTCYBP44-201ENST00000514835 823 ntBASIC5.84□□□□□ -1.47
GTF2A1P52655 RNA5SP400-201ENST00000517155 111 ntBASIC5.84□□□□□ -1.47
GTF2A1P52655 AC008662.1-201ENST00000521805 674 ntTSL 3 BASIC5.84□□□□□ -1.47
GTF2A1P52655 AP000859.1-201ENST00000525536 307 ntBASIC5.84□□□□□ -1.47
GTF2A1P52655 REG4-204ENST00000530654 612 ntTSL 5 BASIC5.84□□□□□ -1.47
GTF2A1P52655 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
GTF2A1P52655 INO80-AS1-202ENST00000560178 444 ntTSL 3 BASIC5.84□□□□□ -1.47
GTF2A1P52655 BMS1P8-201ENST00000565049 1178 ntBASIC5.84□□□□□ -1.47
GTF2A1P52655 AC005546.1-201ENST00000591837 391 ntTSL 3 BASIC5.84□□□□□ -1.47
GTF2A1P52655 IGKV2OR2-10-201ENST00000613976 311 ntBASIC5.84□□□□□ -1.47
GTF2A1P52655 TSPAN6-205ENST00000614008 900 ntTSL 5 BASIC5.84□□□□□ -1.47
GTF2A1P52655 AC010320.5-201ENST00000619124 676 ntBASIC5.84□□□□□ -1.47
GTF2A1P52655 OR5G5P-204ENST00000627642 621 ntBASIC5.84□□□□□ -1.47
GTF2A1P52655 AC026108.1-201ENST00000635444 547 ntBASIC5.84□□□□□ -1.47
GTF2A1P52655 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
GTF2A1P52655 AC007938.2-201ENST00000604666 2634 ntBASIC5.84□□□□□ -1.47
GTF2A1P52655 TRIM75P-201ENST00000503032 1407 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
GTF2A1P52655 DYNC2LI1-201ENST00000260605 1399 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
GTF2A1P52655 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC5.83□□□□□ -1.48
GTF2A1P52655 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC5.83□□□□□ -1.48
GTF2A1P52655 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
GTF2A1P52655 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
GTF2A1P52655 MCTS1-202ENST00000371317 1018 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
GTF2A1P52655 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
GTF2A1P52655 RNA5SP280-201ENST00000411230 115 ntBASIC5.83□□□□□ -1.48
GTF2A1P52655 AC012519.1-201ENST00000424588 610 ntBASIC5.83□□□□□ -1.48
GTF2A1P52655 AL590128.1-201ENST00000433407 286 ntBASIC5.83□□□□□ -1.48
GTF2A1P52655 ANXA2P2-201ENST00000435128 1020 ntBASIC5.83□□□□□ -1.48
GTF2A1P52655 AC068888.2-201ENST00000435621 536 ntTSL 3 BASIC5.83□□□□□ -1.48
GTF2A1P52655 AC022400.2-201ENST00000446730 866 ntTSL 2 BASIC5.83□□□□□ -1.48
GTF2A1P52655 VNN3-210ENST00000450865 596 ntTSL 4 BASIC5.83□□□□□ -1.48
GTF2A1P52655 RPS6P2-201ENST00000454208 705 ntBASIC5.83□□□□□ -1.48
GTF2A1P52655 RPL12P39-201ENST00000455456 496 ntBASIC5.83□□□□□ -1.48
GTF2A1P52655 AL356157.1-201ENST00000456722 732 ntTSL 3 BASIC5.83□□□□□ -1.48
GTF2A1P52655 NDUFB4P1-201ENST00000462398 381 ntBASIC5.83□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 88.6 ms