Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 OR4A6P-201ENST00000534364 970 ntBASIC6.39□□□□□ -1.39
HADHAP40939 AC124891.1-201ENST00000536322 519 ntBASIC6.39□□□□□ -1.39
HADHAP40939 MYL2-203ENST00000548438 664 ntTSL 3 BASIC6.39□□□□□ -1.39
HADHAP40939 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
HADHAP40939 TPRX1P1-201ENST00000557620 319 ntBASIC6.39□□□□□ -1.39
HADHAP40939 AC009120.3-201ENST00000563335 499 ntBASIC6.39□□□□□ -1.39
HADHAP40939 OR4H6P-201ENST00000563771 921 ntBASIC6.39□□□□□ -1.39
HADHAP40939 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC6.39□□□□□ -1.39
HADHAP40939 AC009303.3-201ENST00000591103 736 ntBASIC6.39□□□□□ -1.39
HADHAP40939 AC011500.1-201ENST00000601963 469 ntBASIC6.39□□□□□ -1.39
HADHAP40939 AC083798.2-201ENST00000608756 1152 ntTSL 4 BASIC6.39□□□□□ -1.39
HADHAP40939 AL359091.2-201ENST00000609303 556 ntBASIC6.39□□□□□ -1.39
HADHAP40939 MIR4435-2HG-220ENST00000609902 603 ntTSL 3 BASIC6.39□□□□□ -1.39
HADHAP40939 AC068726.1-201ENST00000610993 341 ntBASIC6.39□□□□□ -1.39
HADHAP40939 AC016911.1-201ENST00000613297 452 ntBASIC6.39□□□□□ -1.39
HADHAP40939 GAPDHP41-201ENST00000613707 975 ntBASIC6.39□□□□□ -1.39
HADHAP40939 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC6.39□□□□□ -1.39
HADHAP40939 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
HADHAP40939 BIN2P1-201ENST00000504996 1530 ntBASIC6.39□□□□□ -1.39
HADHAP40939 CREM-203ENST00000344351 1625 ntTSL 2 BASIC6.39□□□□□ -1.39
HADHAP40939 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC6.39□□□□□ -1.39
HADHAP40939 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC6.39□□□□□ -1.39
HADHAP40939 ZNF610-202ENST00000327920 1855 ntAPPRIS P3 TSL 2 BASIC6.39□□□□□ -1.39
HADHAP40939 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
HADHAP40939 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
HADHAP40939 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC6.38□□□□□ -1.39
HADHAP40939 LINC01822-201ENST00000435682 2098 ntTSL 2 BASIC6.38□□□□□ -1.39
HADHAP40939 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
HADHAP40939 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
HADHAP40939 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
HADHAP40939 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC6.38□□□□□ -1.39
HADHAP40939 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
HADHAP40939 RNA5SP485-201ENST00000365053 119 ntBASIC6.38□□□□□ -1.39
HADHAP40939 PSMD10-206ENST00000372296 878 ntTSL 5 BASIC6.38□□□□□ -1.39
HADHAP40939 SNORA11.5-201ENST00000408163 128 ntBASIC6.38□□□□□ -1.39
HADHAP40939 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
HADHAP40939 RPL24P2-201ENST00000421023 475 ntBASIC6.38□□□□□ -1.39
HADHAP40939 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC6.38□□□□□ -1.39
HADHAP40939 GTF3AP6-201ENST00000432585 986 ntBASIC6.38□□□□□ -1.39
HADHAP40939 AC016582.1-203ENST00000433142 502 ntTSL 3 BASIC6.38□□□□□ -1.39
HADHAP40939 PIK3IP1-AS1-201ENST00000440456 554 ntTSL 3 BASIC6.38□□□□□ -1.39
HADHAP40939 AL158850.1-201ENST00000441249 914 ntTSL 3 BASIC6.38□□□□□ -1.39
HADHAP40939 AC245291.3-201ENST00000443400 292 ntBASIC6.38□□□□□ -1.39
HADHAP40939 RAD1P2-201ENST00000446414 663 ntBASIC6.38□□□□□ -1.39
HADHAP40939 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC6.38□□□□□ -1.39
HADHAP40939 RBMY2HP-201ENST00000457961 720 ntBASIC6.38□□□□□ -1.39
HADHAP40939 CPHL1P-204ENST00000482639 584 ntTSL 5 BASIC6.38□□□□□ -1.39
HADHAP40939 OR9A1P-202ENST00000484361 945 ntBASIC6.38□□□□□ -1.39
HADHAP40939 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC6.38□□□□□ -1.39
HADHAP40939 AC131094.1-201ENST00000506984 490 ntTSL 2 BASIC6.38□□□□□ -1.39
HADHAP40939 AC116345.3-201ENST00000508255 449 ntTSL 3 BASIC6.38□□□□□ -1.39
HADHAP40939 AC010343.2-201ENST00000510162 224 ntBASIC6.38□□□□□ -1.39
HADHAP40939 SNORA81.2-201ENST00000516868 170 ntBASIC6.38□□□□□ -1.39
HADHAP40939 AP003033.2-201ENST00000528901 805 ntBASIC6.38□□□□□ -1.39
HADHAP40939 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC6.38□□□□□ -1.39
HADHAP40939 AC024405.1-201ENST00000532521 1042 ntBASIC6.38□□□□□ -1.39
HADHAP40939 LDHC-203ENST00000535809 757 ntTSL 5 BASIC6.38□□□□□ -1.39
HADHAP40939 TDGP1-201ENST00000543961 1229 ntBASIC6.38□□□□□ -1.39
HADHAP40939 WDR61-205ENST00000558459 884 ntTSL 3 BASIC6.38□□□□□ -1.39
HADHAP40939 AC007494.1-201ENST00000562293 760 ntBASIC6.38□□□□□ -1.39
HADHAP40939 RAB27A-212ENST00000569493 1013 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
HADHAP40939 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC6.38□□□□□ -1.39
HADHAP40939 LINC01916-201ENST00000582028 559 ntTSL 4 BASIC6.38□□□□□ -1.39
HADHAP40939 AC026898.1-201ENST00000586404 571 ntBASIC6.38□□□□□ -1.39
HADHAP40939 MIR7515HG-235ENST00000590865 918 ntTSL 5 BASIC6.38□□□□□ -1.39
HADHAP40939 AC117490.2-201ENST00000610042 594 ntBASIC6.38□□□□□ -1.39
HADHAP40939 MIR6780B-201ENST00000610307 79 ntBASIC6.38□□□□□ -1.39
HADHAP40939 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC6.38□□□□□ -1.39
HADHAP40939 AC116667.2-201ENST00000641075 823 ntBASIC6.38□□□□□ -1.39
HADHAP40939 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
HADHAP40939 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC6.38□□□□□ -1.39
HADHAP40939 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
HADHAP40939 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
HADHAP40939 SLC10A7-204ENST00000502607 1638 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
HADHAP40939 AL020995.1-201ENST00000427524 1680 ntTSL 2 BASIC6.38□□□□□ -1.39
HADHAP40939 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
HADHAP40939 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC6.38□□□□□ -1.39
HADHAP40939 AL391704.1-201ENST00000422206 2368 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
HADHAP40939 ARHGAP29-201ENST00000260526 6087 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
HADHAP40939 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
HADHAP40939 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
HADHAP40939 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
HADHAP40939 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC6.37□□□□□ -1.39
HADHAP40939 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
HADHAP40939 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
HADHAP40939 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC6.37□□□□□ -1.39
HADHAP40939 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC6.37□□□□□ -1.39
HADHAP40939 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC6.37□□□□□ -1.39
HADHAP40939 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
HADHAP40939 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
HADHAP40939 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC6.37□□□□□ -1.39
HADHAP40939 CADM2-202ENST00000405615 1314 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
HADHAP40939 OR51J1-201ENST00000332043 951 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
HADHAP40939 RN7SKP250-201ENST00000363924 321 ntBASIC6.37□□□□□ -1.39
HADHAP40939 RNU6-891P-201ENST00000384280 111 ntBASIC6.37□□□□□ -1.39
HADHAP40939 RN7SKP129-201ENST00000410288 299 ntBASIC6.37□□□□□ -1.39
HADHAP40939 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC6.37□□□□□ -1.39
HADHAP40939 TEX50-201ENST00000417563 821 ntAPPRIS P1 TSL 2 BASIC6.37□□□□□ -1.39
HADHAP40939 AC007562.1-201ENST00000421819 517 ntBASIC6.37□□□□□ -1.39
HADHAP40939 AL603840.1-203ENST00000424357 645 ntTSL 3 BASIC6.37□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms