Protein–RNA interactions for Protein: P31269

HOXA9, Homeobox protein Hox-A9, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9P31269 AC068389.1-202ENST00000526470 3564 ntTSL 2 BASIC6.41□□□□□ -1.38
HOXA9P31269 SYT14-207ENST00000629778 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
HOXA9P31269 ERI2-206ENST00000563117 2903 ntTSL 2 BASIC6.41□□□□□ -1.38
HOXA9P31269 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC6.41□□□□□ -1.38
HOXA9P31269 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC6.41□□□□□ -1.38
HOXA9P31269 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC6.41□□□□□ -1.38
HOXA9P31269 NOP10-201ENST00000328848 554 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
HOXA9P31269 MIR143-201ENST00000385300 106 ntBASIC6.41□□□□□ -1.38
HOXA9P31269 RNU11-6P-201ENST00000391127 133 ntBASIC6.41□□□□□ -1.38
HOXA9P31269 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
HOXA9P31269 OR7E101P-201ENST00000400428 513 ntBASIC6.41□□□□□ -1.38
HOXA9P31269 RN7SKP286-201ENST00000410894 299 ntBASIC6.41□□□□□ -1.38
HOXA9P31269 RPL35AP3-201ENST00000414680 288 ntBASIC6.41□□□□□ -1.38
HOXA9P31269 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC6.41□□□□□ -1.38
HOXA9P31269 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC6.41□□□□□ -1.38
HOXA9P31269 CYP4F30P-202ENST00000420048 405 ntBASIC6.41□□□□□ -1.38
HOXA9P31269 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC6.41□□□□□ -1.38
HOXA9P31269 DNAJC19P5-201ENST00000443295 316 ntBASIC6.41□□□□□ -1.38
HOXA9P31269 AC023141.9-201ENST00000458734 412 ntBASIC6.41□□□□□ -1.38
HOXA9P31269 RN7SL717P-201ENST00000478343 297 ntBASIC6.41□□□□□ -1.38
HOXA9P31269 AC114728.1-201ENST00000488289 483 ntBASIC6.41□□□□□ -1.38
HOXA9P31269 RNA5SP400-201ENST00000517155 111 ntBASIC6.41□□□□□ -1.38
HOXA9P31269 AC092865.1-201ENST00000544395 1023 ntBASIC6.41□□□□□ -1.38
HOXA9P31269 AC090022.1-201ENST00000546569 311 ntBASIC6.41□□□□□ -1.38
HOXA9P31269 AC093524.1-201ENST00000564266 1094 ntBASIC6.41□□□□□ -1.38
HOXA9P31269 MIR4776-2-201ENST00000580204 80 ntBASIC6.41□□□□□ -1.38
HOXA9P31269 AC027229.1-201ENST00000583887 253 ntBASIC6.41□□□□□ -1.38
HOXA9P31269 OR7A8P-201ENST00000595427 913 ntBASIC6.41□□□□□ -1.38
HOXA9P31269 AL357562.1-201ENST00000624911 609 ntBASIC6.41□□□□□ -1.38
HOXA9P31269 OR7A1P-202ENST00000641542 1158 ntBASIC6.41□□□□□ -1.38
HOXA9P31269 IARS-202ENST00000375643 4656 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
HOXA9P31269 APOL4-203ENST00000352371 3227 ntAPPRIS P4 TSL 1 (best) BASIC6.41□□□□□ -1.38
HOXA9P31269 GABRB2-201ENST00000274547 7409 ntTSL 5 BASIC6.41□□□□□ -1.38
HOXA9P31269 PPP1R11-201ENST00000376758 1723 ntTSL 2 BASIC6.41□□□□□ -1.38
HOXA9P31269 DICER1-201ENST00000343455 10277 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
HOXA9P31269 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
HOXA9P31269 AC010894.3-202ENST00000412835 1405 ntTSL 2 BASIC6.41□□□□□ -1.38
HOXA9P31269 AC106872.5-201ENST00000508856 1416 ntBASIC6.41□□□□□ -1.38
HOXA9P31269 BDNF-217ENST00000533131 3878 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
HOXA9P31269 AP001157.1-201ENST00000550837 2339 ntBASIC6.41□□□□□ -1.38
HOXA9P31269 LINC01958-201ENST00000637749 1941 ntTSL 5 BASIC6.4□□□□□ -1.38
HOXA9P31269 ODF2-205ENST00000393527 3653 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
HOXA9P31269 ZBTB8B-201ENST00000609129 12834 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.38
HOXA9P31269 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC6.4□□□□□ -1.38
HOXA9P31269 GSTCD-202ENST00000394728 2416 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.38
HOXA9P31269 ZNF630-202ENST00000409324 2455 ntAPPRIS P2 TSL 1 (best) BASIC6.4□□□□□ -1.38
HOXA9P31269 PDE1C-203ENST00000396184 8852 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
HOXA9P31269 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC6.4□□□□□ -1.38
HOXA9P31269 DNHD1-212ENST00000527990 14298 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.38
HOXA9P31269 IL31RA-202ENST00000354961 2658 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.38
HOXA9P31269 OR52I2-203ENST00000641896 6591 ntAPPRIS ALT2 BASIC6.4□□□□□ -1.38
HOXA9P31269 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
HOXA9P31269 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC6.4□□□□□ -1.38
HOXA9P31269 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
HOXA9P31269 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.4□□□□□ -1.38
HOXA9P31269 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.4□□□□□ -1.38
HOXA9P31269 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.4□□□□□ -1.38
HOXA9P31269 MIR433-201ENST00000384837 93 ntBASIC6.4□□□□□ -1.38
HOXA9P31269 SNORA11B-201ENST00000408175 129 ntBASIC6.4□□□□□ -1.38
HOXA9P31269 AL096829.1-201ENST00000413677 457 ntBASIC6.4□□□□□ -1.38
HOXA9P31269 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC6.4□□□□□ -1.38
HOXA9P31269 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC6.4□□□□□ -1.38
HOXA9P31269 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
HOXA9P31269 RPS15AP30-201ENST00000420976 390 ntBASIC6.4□□□□□ -1.38
HOXA9P31269 AL133465.1-201ENST00000432942 512 ntTSL 3 BASIC6.4□□□□□ -1.38
HOXA9P31269 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
HOXA9P31269 AC092967.1-201ENST00000449016 481 ntBASIC6.4□□□□□ -1.38
HOXA9P31269 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC6.4□□□□□ -1.38
HOXA9P31269 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC6.4□□□□□ -1.38
HOXA9P31269 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC6.4□□□□□ -1.38
HOXA9P31269 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC6.4□□□□□ -1.38
HOXA9P31269 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC6.4□□□□□ -1.38
HOXA9P31269 AC067852.5-201ENST00000589299 310 ntBASIC6.4□□□□□ -1.38
HOXA9P31269 AL117336.3-201ENST00000603160 1107 ntTSL 3 BASIC6.4□□□□□ -1.38
HOXA9P31269 LAPTM4BP2-201ENST00000604542 446 ntBASIC6.4□□□□□ -1.38
HOXA9P31269 AC141002.1-201ENST00000607025 279 ntBASIC6.4□□□□□ -1.38
HOXA9P31269 AL445649.1-201ENST00000615941 691 ntBASIC6.4□□□□□ -1.38
HOXA9P31269 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC6.4□□□□□ -1.38
HOXA9P31269 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC6.4□□□□□ -1.38
HOXA9P31269 LINC00907-201ENST00000585627 3324 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
HOXA9P31269 FASTKD2-203ENST00000403094 2344 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.38
HOXA9P31269 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
HOXA9P31269 PRRC2C-202ENST00000367742 10366 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.39
HOXA9P31269 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
HOXA9P31269 FGF13-201ENST00000305414 1939 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
HOXA9P31269 ZBTB25-204ENST00000608382 10372 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
HOXA9P31269 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC6.4□□□□□ -1.39
HOXA9P31269 ABLIM1-202ENST00000369252 7690 ntTSL 5 BASIC6.4□□□□□ -1.39
HOXA9P31269 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
HOXA9P31269 AL161901.1-201ENST00000624954 3425 ntBASIC6.4□□□□□ -1.39
HOXA9P31269 AC093829.1-201ENST00000506662 1618 ntBASIC6.39□□□□□ -1.39
HOXA9P31269 SCYL3-201ENST00000367770 2916 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
HOXA9P31269 BRWD3-201ENST00000373275 11381 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
HOXA9P31269 SULF1-201ENST00000260128 5710 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
HOXA9P31269 FOXJ3-204ENST00000372572 5352 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
HOXA9P31269 STK32A-202ENST00000397936 5393 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
HOXA9P31269 RBM28-201ENST00000223073 15507 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
HOXA9P31269 ZNF138-204ENST00000437743 2574 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
HOXA9P31269 ATF7IP-201ENST00000261168 8878 ntAPPRIS P3 TSL 5 BASIC6.39□□□□□ -1.39
HOXA9P31269 ADA2-206ENST00000449907 4278 ntAPPRIS ALT2 TSL 2 BASIC6.39□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 72.6 ms